RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 NISCHQ9Y2I1 1504 aa64.49■■■■■ 7.91
ATRAID-201ENST00000380171 CCDC180Q9P1Z9 1646 aa57.3■■■■■ 6.76
ATRAID-201ENST00000380171 ABCC9O60706 1549 aa55.62■■■■■ 6.49
ATRAID-201ENST00000380171 ZCCHC6Q5VYS8 1495 aaKnown RBP53.84■■■■■ 6.21
ATRAID-201ENST00000380171 RB1CC1Q8TDY2 1594 aa53.7■■■■■ 6.19
ATRAID-201ENST00000380171 NACADO15069 1562 aa53.7■■■■■ 6.19
ATRAID-201ENST00000380171 DCAF8L2P0C7V8 631 aa53.66■■■■■ 6.18
ATRAID-201ENST00000380171 MYO15BQ96JP2 1530 aa53.46■■■■■ 6.15
ATRAID-201ENST00000380171 DCAF1Q9Y4B6 1507 aa53.38■■■■■ 6.14
ATRAID-201ENST00000380171 UNC13AQ9UPW8 1703 aa52.57■■■■■ 6.01
ATRAID-201ENST00000380171 SCRIBQ14160 1630 aa52.32■■■■■ 5.97
ATRAID-201ENST00000380171 BICRAQ9NZM4 1560 aa52.03■■■■■ 5.92
ATRAID-201ENST00000380171 PABPN1Q86U42 306 aaKnown RBP eCLIP51.95■■■■■ 5.91
ATRAID-201ENST00000380171 SHROOM4Q9ULL8 1493 aa51.54■■■■■ 5.84
ATRAID-201ENST00000380171 EIF4G1Q04637 1599 aaKnown RBP50.65■■■■■ 5.7
ATRAID-201ENST00000380171 DNAJC5BQ9UF47 199 aa50.54■■■■■ 5.68
ATRAID-201ENST00000380171 CC2D2AQ9P2K1 1620 aa50.35■■■■■ 5.65
ATRAID-201ENST00000380171 CECR2Q9BXF3 1484 aa50.18■■■■■ 5.62
ATRAID-201ENST00000380171 SMARCA4P51532 1647 aa50.04■■■■■ 5.6
ATRAID-201ENST00000380171 BAZ1AQ9NRL2 1556 aaPredicted RBP50.01■■■■■ 5.6
ATRAID-201ENST00000380171 MROH2BQ7Z745 1585 aa49.72■■■■■ 5.55
ATRAID-201ENST00000380171 SMARCA2P51531 1590 aa49.61■■■■■ 5.53
ATRAID-201ENST00000380171 ATAD2BQ9ULI0 1458 aa49.58■■■■■ 5.53
ATRAID-201ENST00000380171 PEG3Q9GZU2 1588 aa49.49■■■■■ 5.51
ATRAID-201ENST00000380171 NCAPD3P42695 1498 aa49.47■■■■■ 5.51
ATRAID-201ENST00000380171 HMGXB3Q12766 1538 aa49.37■■■■■ 5.49
ATRAID-201ENST00000380171 BAZ1BQ9UIG0 1483 aaKnown RBP49.26■■■■■ 5.48
ATRAID-201ENST00000380171 WIZO95785 1651 aa49.26■■■■■ 5.48
ATRAID-201ENST00000380171 RSF1Q96T23 1441 aaPredicted RBP49.24■■■■■ 5.47
ATRAID-201ENST00000380171 TOP2AP11388 1531 aaKnown RBP48.77■■■■■ 5.4
ATRAID-201ENST00000380171 SUPT5HO00267 1087 aaKnown RBP48.26■■■■■ 5.32
ATRAID-201ENST00000380171 NESP48681 1621 aa48.23■■■■■ 5.31
ATRAID-201ENST00000380171 LAMC3Q9Y6N6 1575 aa48.21■■■■■ 5.31
ATRAID-201ENST00000380171 CCDC88BA6NC98 1476 aa48.1■■■■■ 5.29
ATRAID-201ENST00000380171 CADPSQ9ULU8 1353 aa48.04■■■■■ 5.28
ATRAID-201ENST00000380171 ERCC6Q03468 1493 aa47.95■■■■■ 5.27
ATRAID-201ENST00000380171 CFTRP13569 1480 aa47.86■■■■■ 5.25
ATRAID-201ENST00000380171 PDS5BQ9NTI5 1447 aa47.8■■■■■ 5.24
ATRAID-201ENST00000380171 KIF21AQ7Z4S6 1674 aa47.78■■■■■ 5.24
ATRAID-201ENST00000380171 PRDM2Q13029 1718 aa47.73■■■■■ 5.23
ATRAID-201ENST00000380171 FANCD2Q9BXW9 1451 aa47.56■■■■■ 5.2
ATRAID-201ENST00000380171 THOC2Q8NI27 1593 aaKnown RBP47.5■■■■■ 5.19
ATRAID-201ENST00000380171 CEP164Q9UPV0 1460 aa47.5■■■■■ 5.19
ATRAID-201ENST00000380171 MRC2Q9UBG0 1479 aa47.35■■■■■ 5.17
ATRAID-201ENST00000380171 CUX2O14529 1486 aa47.27■■■■■ 5.16
ATRAID-201ENST00000380171 WDR62O43379 1518 aa47.19■■■■■ 5.14
ATRAID-201ENST00000380171 URB2Q14146 1524 aaKnown RBP47.07■■■■■ 5.13
ATRAID-201ENST00000380171 DNMBPQ6XZF7 1577 aa46.88■■■■■ 5.1
ATRAID-201ENST00000380171 TOPBP1Q92547 1522 aa46.85■■■■■ 5.09
ATRAID-201ENST00000380171 ABCC8Q09428 1581 aa46.84■■■■■ 5.09
ATRAID-201ENST00000380171 CUX1P39880 1505 aa46.64■■■■■ 5.06
ATRAID-201ENST00000380171 POLA1P09884 1462 aaPredicted RBP46.47■■■■■ 5.03
ATRAID-201ENST00000380171 WRNQ14191 1432 aaPredicted RBP eCLIP46.46■■■■■ 5.03
ATRAID-201ENST00000380171 IFT140Q96RY7 1462 aa46.46■■■■■ 5.03
ATRAID-201ENST00000380171 FGD5Q6ZNL6 1462 aa46.44■■■■■ 5.02
ATRAID-201ENST00000380171 BIVM-ERCC5R4GMW8 1640 aa46.4■■■■■ 5.02
ATRAID-201ENST00000380171 SYNJ1O43426 1573 aa46.39■■■■■ 5.02
ATRAID-201ENST00000380171 TOP2BQ02880 1626 aa46.37■■■■■ 5.01
ATRAID-201ENST00000380171 TARBP1Q13395 1621 aaKnown RBP46.33■■■■■ 5.01
ATRAID-201ENST00000380171 RAD54L2Q9Y4B4 1467 aa46.25■■■■■ 5
ATRAID-201ENST00000380171 SOGA1O94964 1423 aa46.24■■■■■ 4.99
ATRAID-201ENST00000380171 ZNF608Q9ULD9 1512 aaPredicted RBP46.21■■■■■ 4.99
ATRAID-201ENST00000380171 EIF4G3O43432 1585 aaKnown RBP46.15■■■■■ 4.98
ATRAID-201ENST00000380171 WDR97A6NE52 1622 aa46.13■■■■■ 4.97
ATRAID-201ENST00000380171 ABCA10Q8WWZ4 1543 aa45.98■■■■■ 4.95
ATRAID-201ENST00000380171 AQRO60306 1485 aaKnown RBP eCLIP45.96■■■■■ 4.952e-7■■■□□ 15.2
ATRAID-201ENST00000380171 TDRD9Q8NDG6 1382 aaKnown RBP45.94■■■■■ 4.94
ATRAID-201ENST00000380171 ABCA5Q8WWZ7 1642 aa45.84■■■■■ 4.93
ATRAID-201ENST00000380171 PBRM1Q86U86 1689 aa45.78■■■■■ 4.92
ATRAID-201ENST00000380171 GAPVD1Q14C86 1478 aa45.75■■■■■ 4.91
ATRAID-201ENST00000380171 GRIN2BQ13224 1484 aa45.7■■■■■ 4.91
ATRAID-201ENST00000380171 SNAPC4Q5SXM2 1469 aa45.62■■■■■ 4.89
ATRAID-201ENST00000380171 MAGI1Q96QZ7 1491 aaPredicted RBP45.56■■■■■ 4.88
ATRAID-201ENST00000380171 TRIM41Q8WV44 630 aa45.55■■■■■ 4.88
ATRAID-201ENST00000380171 CHD1O14646 1710 aa45.52■■■■■ 4.88
ATRAID-201ENST00000380171 KIF27Q86VH2 1401 aa45.46■■■■■ 4.87
ATRAID-201ENST00000380171 ERICH3Q5RHP9 1530 aa45.46■■■■■ 4.87
ATRAID-201ENST00000380171 ADAMTS12P58397 1594 aa45.39■■■■■ 4.86
ATRAID-201ENST00000380171 SYNJ2O15056 1496 aa45.36■■■■■ 4.85
ATRAID-201ENST00000380171 FBLN2P98095 1184 aa45.33■■■■■ 4.85
ATRAID-201ENST00000380171 OSCARQ8IYS5 282 aa45.26■■■■■ 4.84
ATRAID-201ENST00000380171 CHMP7Q8WUX9 453 aaPredicted RBP45.25■■■■■ 4.83
ATRAID-201ENST00000380171 DNAJC5Q9H3Z4 198 aa45.24■■■■■ 4.83
ATRAID-201ENST00000380171 FHAD1B1AJZ9 1412 aa45.23■■■■■ 4.83
ATRAID-201ENST00000380171 CHIC1Q5VXU3 224 aa45.21■■■■■ 4.83
ATRAID-201ENST00000380171 CUL7Q14999 1698 aa45.19■■■■■ 4.83
ATRAID-201ENST00000380171 IGF1RP08069 1367 aa45.14■■■■■ 4.82
ATRAID-201ENST00000380171 RUSC2Q8N2Y8 1516 aa45.13■■■■■ 4.82
ATRAID-201ENST00000380171 GRIN2AQ12879 1464 aa45.13■■■■■ 4.82
ATRAID-201ENST00000380171 CLASP1Q7Z460 1538 aa44.96■■■■■ 4.79
ATRAID-201ENST00000380171 CARMIL1Q5VZK9 1371 aa44.93■■■■■ 4.78
ATRAID-201ENST00000380171 CEP170Q5SW79 1584 aa44.92■■■■■ 4.78
ATRAID-201ENST00000380171 NUP160Q12769 1436 aa44.88■■■■■ 4.78
ATRAID-201ENST00000380171 EEA1Q15075 1411 aa44.84■■■■■ 4.77
ATRAID-201ENST00000380171 RAPGEF2Q9Y4G8 1499 aa44.74■■■■■ 4.75
ATRAID-201ENST00000380171 ARHGEF11O15085 1522 aa44.66■■■■■ 4.74
ATRAID-201ENST00000380171 RIMBP3CA6NJZ7 1639 aa44.66■■■■■ 4.74
ATRAID-201ENST00000380171 RIMBP3BA6NNM3 1639 aa44.66■■■■■ 4.74
ATRAID-201ENST00000380171 RIMBP3Q9UFD9 1639 aa44.66■■■■■ 4.74
ATRAID-201ENST00000380171 PRXQ9BXM0 1461 aa44.66■■■■■ 4.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms