Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.42■■□□□ 1.34
SLC6A7Q99884 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A7Q99884 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SLC6A7Q99884 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SLC6A7Q99884 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.39■■□□□ 1.33
SLC6A7Q99884 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC23.39■■□□□ 1.33
SLC6A7Q99884 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
SLC6A7Q99884 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.38■■□□□ 1.33
SLC6A7Q99884 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC6A7Q99884 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC23.37■■□□□ 1.33
SLC6A7Q99884 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC6A7Q99884 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.36■■□□□ 1.33
SLC6A7Q99884 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC6A7Q99884 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC6A7Q99884 ABCB10P3-201ENST00000561950 2166 ntBASIC23.35■■□□□ 1.33
SLC6A7Q99884 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC6A7Q99884 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLC6A7Q99884 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
SLC6A7Q99884 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SLC6A7Q99884 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC6A7Q99884 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC6A7Q99884 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.33■■□□□ 1.32
SLC6A7Q99884 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SLC6A7Q99884 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.32■■□□□ 1.32
SLC6A7Q99884 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC6A7Q99884 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC6A7Q99884 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC6A7Q99884 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC6A7Q99884 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC6A7Q99884 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC6A7Q99884 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A7Q99884 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A7Q99884 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A7Q99884 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.28■■□□□ 1.32
SLC6A7Q99884 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC6A7Q99884 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC6A7Q99884 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC6A7Q99884 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A7Q99884 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SLC6A7Q99884 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A7Q99884 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A7Q99884 AC120057.4-201ENST00000624722 1615 ntBASIC23.26■■□□□ 1.31
SLC6A7Q99884 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLC6A7Q99884 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLC6A7Q99884 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A7Q99884 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.25■■□□□ 1.31
SLC6A7Q99884 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.25■■□□□ 1.31
SLC6A7Q99884 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A7Q99884 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A7Q99884 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.23■■□□□ 1.31
SLC6A7Q99884 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.23■■□□□ 1.31
SLC6A7Q99884 AC097358.2-201ENST00000607541 1159 ntBASIC23.23■■□□□ 1.31
SLC6A7Q99884 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A7Q99884 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.2■■□□□ 1.3
SLC6A7Q99884 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC6A7Q99884 SETD8P1-201ENST00000623146 1180 ntBASIC23.19■■□□□ 1.3
SLC6A7Q99884 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SLC6A7Q99884 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLC6A7Q99884 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A7Q99884 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC6A7Q99884 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC6A7Q99884 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.17■■□□□ 1.3
SLC6A7Q99884 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC6A7Q99884 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.17■■□□□ 1.3
SLC6A7Q99884 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A7Q99884 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC6A7Q99884 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SLC6A7Q99884 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A7Q99884 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SLC6A7Q99884 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC6A7Q99884 AC136428.2-201ENST00000563187 214 ntBASIC23.13■■□□□ 1.29
SLC6A7Q99884 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC6A7Q99884 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
SLC6A7Q99884 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
SLC6A7Q99884 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A7Q99884 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SLC6A7Q99884 AC139426.1-201ENST00000568218 2529 ntBASIC23.11■■□□□ 1.29
SLC6A7Q99884 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A7Q99884 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A7Q99884 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A7Q99884 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.09■■□□□ 1.29
SLC6A7Q99884 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A7Q99884 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SLC6A7Q99884 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A7Q99884 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A7Q99884 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC6A7Q99884 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SLC6A7Q99884 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A7Q99884 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A7Q99884 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SLC6A7Q99884 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A7Q99884 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SLC6A7Q99884 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC6A7Q99884 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SLC6A7Q99884 SUZ12P1-203ENST00000578195 985 ntBASIC23.01■■□□□ 1.27
SLC6A7Q99884 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC6A7Q99884 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC6A7Q99884 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SLC6A7Q99884 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC6A7Q99884 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms