Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.2■□□□□ 0.66
UBE2D3P61077 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2D3P61077 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UBE2D3P61077 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2D3P61077 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2D3P61077 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2D3P61077 AL031258.1-201ENST00000623562 325 ntBASIC19.17■□□□□ 0.66
UBE2D3P61077 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2D3P61077 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2D3P61077 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2D3P61077 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2D3P61077 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE2D3P61077 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2D3P61077 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2D3P61077 AP002365.1-201ENST00000603448 772 ntBASIC19.14■□□□□ 0.65
UBE2D3P61077 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2D3P61077 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2D3P61077 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2D3P61077 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2D3P61077 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
UBE2D3P61077 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2D3P61077 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2D3P61077 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2D3P61077 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2D3P61077 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.08■□□□□ 0.65
UBE2D3P61077 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2D3P61077 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2D3P61077 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2D3P61077 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
UBE2D3P61077 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.05■□□□□ 0.64
UBE2D3P61077 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBE2D3P61077 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2D3P61077 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2D3P61077 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2D3P61077 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UBE2D3P61077 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UBE2D3P61077 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UBE2D3P61077 ABCB10P3-201ENST00000561950 2166 ntBASIC19.02■□□□□ 0.63
UBE2D3P61077 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2D3P61077 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2D3P61077 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19■□□□□ 0.63
UBE2D3P61077 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBE2D3P61077 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE2D3P61077 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2D3P61077 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2D3P61077 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2D3P61077 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
UBE2D3P61077 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2D3P61077 ABCB10P1-201ENST00000614297 2181 ntBASIC18.98■□□□□ 0.63
UBE2D3P61077 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2D3P61077 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE2D3P61077 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
UBE2D3P61077 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2D3P61077 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2D3P61077 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
UBE2D3P61077 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2D3P61077 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
UBE2D3P61077 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2D3P61077 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.94■□□□□ 0.62
UBE2D3P61077 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2D3P61077 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2D3P61077 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2D3P61077 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
UBE2D3P61077 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
UBE2D3P61077 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2D3P61077 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
UBE2D3P61077 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2D3P61077 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2D3P61077 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2D3P61077 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE2D3P61077 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2D3P61077 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.9■□□□□ 0.62
UBE2D3P61077 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2D3P61077 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBE2D3P61077 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2D3P61077 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.89■□□□□ 0.61
UBE2D3P61077 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.89■□□□□ 0.61
UBE2D3P61077 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2D3P61077 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
UBE2D3P61077 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2D3P61077 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
UBE2D3P61077 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2D3P61077 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.87■□□□□ 0.61
UBE2D3P61077 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2D3P61077 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2D3P61077 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2D3P61077 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2D3P61077 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2D3P61077 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2D3P61077 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBE2D3P61077 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2D3P61077 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2D3P61077 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2D3P61077 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
UBE2D3P61077 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms