Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.83■■■□□ 2.69
NCLP19338 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.69
NCLP19338 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
NCLP19338 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NCLP19338 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NCLP19338 DYNLL1-208ENST00000550178 581 ntBASIC31.81■■■□□ 2.68
NCLP19338 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.8■■■□□ 2.68
NCLP19338 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NCLP19338 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NCLP19338 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NCLP19338 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
NCLP19338 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NCLP19338 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NCLP19338 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NCLP19338 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NCLP19338 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.78■■■□□ 2.68
NCLP19338 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.78■■■□□ 2.68
NCLP19338 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NCLP19338 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NCLP19338 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
NCLP19338 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
NCLP19338 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
NCLP19338 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
NCLP19338 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
NCLP19338 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NCLP19338 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NCLP19338 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.74■■■□□ 2.67
NCLP19338 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
NCLP19338 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
NCLP19338 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC31.72■■■□□ 2.67
NCLP19338 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
NCLP19338 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
NCLP19338 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NCLP19338 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NCLP19338 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NCLP19338 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
NCLP19338 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.68■■■□□ 2.66
NCLP19338 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.68■■■□□ 2.66
NCLP19338 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
NCLP19338 AC139426.1-201ENST00000568218 2529 ntBASIC31.68■■■□□ 2.66
NCLP19338 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NCLP19338 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NCLP19338 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
NCLP19338 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NCLP19338 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
NCLP19338 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
NCLP19338 AL031258.1-201ENST00000623562 325 ntBASIC31.61■■■□□ 2.65
NCLP19338 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.6■■■□□ 2.65
NCLP19338 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NCLP19338 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.58■■■□□ 2.65
NCLP19338 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
NCLP19338 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
NCLP19338 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.56■■■□□ 2.64
NCLP19338 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
NCLP19338 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
NCLP19338 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.55■■■□□ 2.64
NCLP19338 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.54■■■□□ 2.64
NCLP19338 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NCLP19338 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NCLP19338 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
NCLP19338 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.52■■■□□ 2.64
NCLP19338 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NCLP19338 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.49■■■□□ 2.63
NCLP19338 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
NCLP19338 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NCLP19338 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
NCLP19338 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
NCLP19338 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
NCLP19338 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.62
NCLP19338 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.44■■■□□ 2.62
NCLP19338 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.44■■■□□ 2.62
NCLP19338 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
NCLP19338 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NCLP19338 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NCLP19338 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NCLP19338 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
NCLP19338 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.39■■■□□ 2.62
NCLP19338 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NCLP19338 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NCLP19338 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NCLP19338 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
NCLP19338 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NCLP19338 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.37■■■□□ 2.61
NCLP19338 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.37■■■□□ 2.61
NCLP19338 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.36■■■□□ 2.61
NCLP19338 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NCLP19338 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NCLP19338 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NCLP19338 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
NCLP19338 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
NCLP19338 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NCLP19338 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.33■■■□□ 2.61
NCLP19338 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.33■■■□□ 2.61
NCLP19338 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.33■■■□□ 2.61
NCLP19338 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
NCLP19338 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NCLP19338 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCLP19338 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NCLP19338 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCLP19338 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms