Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAI2O43623 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.08■□□□□ 0.81
SNAI2O43623 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNAI2O43623 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SNAI2O43623 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAI2O43623 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNAI2O43623 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAI2O43623 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.06■□□□□ 0.8
SNAI2O43623 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAI2O43623 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SNAI2O43623 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SNAI2O43623 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SNAI2O43623 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAI2O43623 ABCB10P3-201ENST00000561950 2166 ntBASIC20.02■□□□□ 0.8
SNAI2O43623 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAI2O43623 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAI2O43623 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.01■□□□□ 0.79
SNAI2O43623 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAI2O43623 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNAI2O43623 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20■□□□□ 0.79
SNAI2O43623 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNAI2O43623 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SNAI2O43623 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.99■□□□□ 0.79
SNAI2O43623 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAI2O43623 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SNAI2O43623 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNAI2O43623 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAI2O43623 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAI2O43623 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SNAI2O43623 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
SNAI2O43623 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI2O43623 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAI2O43623 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAI2O43623 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI2O43623 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.92■□□□□ 0.78
SNAI2O43623 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAI2O43623 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNAI2O43623 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNAI2O43623 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI2O43623 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI2O43623 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNAI2O43623 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNAI2O43623 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAI2O43623 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAI2O43623 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SNAI2O43623 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SNAI2O43623 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAI2O43623 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNAI2O43623 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.87■□□□□ 0.77
SNAI2O43623 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNAI2O43623 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNAI2O43623 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNAI2O43623 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNAI2O43623 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNAI2O43623 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNAI2O43623 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNAI2O43623 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNAI2O43623 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNAI2O43623 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNAI2O43623 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI2O43623 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI2O43623 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SNAI2O43623 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI2O43623 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNAI2O43623 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SNAI2O43623 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.81■□□□□ 0.76
SNAI2O43623 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI2O43623 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI2O43623 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNAI2O43623 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNAI2O43623 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SNAI2O43623 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNAI2O43623 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNAI2O43623 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.79■□□□□ 0.76
SNAI2O43623 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.79■□□□□ 0.76
SNAI2O43623 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNAI2O43623 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNAI2O43623 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNAI2O43623 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI2O43623 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI2O43623 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.76■□□□□ 0.75
SNAI2O43623 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNAI2O43623 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SNAI2O43623 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNAI2O43623 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.74■□□□□ 0.75
SNAI2O43623 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNAI2O43623 AC006077.2-201ENST00000623591 457 ntBASIC19.74■□□□□ 0.75
SNAI2O43623 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNAI2O43623 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SNAI2O43623 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI2O43623 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI2O43623 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SNAI2O43623 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNAI2O43623 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.73■□□□□ 0.75
SNAI2O43623 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SNAI2O43623 ST7-AS1-201ENST00000456775 1889 ntBASIC19.73■□□□□ 0.75
SNAI2O43623 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAI2O43623 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.72■□□□□ 0.75
SNAI2O43623 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAI2O43623 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms