RNA–Protein interactions for RNA: ENST00000254190.3

CHSY1-201, Transcript of chondroitin sulfate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHSY1, Length 4,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY1-201ENST00000254190 DCAF8L2P0C7V8 631 aa41.56■■■■■ 4.24
CHSY1-201ENST00000254190 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
CHSY1-201ENST00000254190 SUPT5HO00267 1087 aaKnown RBP40.4■■■■■ 4.06
CHSY1-201ENST00000254190 SHROOM4Q9ULL8 1493 aa39.79■■■■□ 3.96
CHSY1-201ENST00000254190 EHMT2Q96KQ7 1210 aa38.81■■■■□ 3.8
CHSY1-201ENST00000254190 PCGF6Q9BYE7 350 aa38.22■■■■□ 3.71
CHSY1-201ENST00000254190 FAM9AQ8IZU1 332 aaPredicted RBP38.01■■■■□ 3.67
CHSY1-201ENST00000254190 TTBK1Q5TCY1 1321 aaPredicted RBP37.54■■■■□ 3.6
CHSY1-201ENST00000254190 APLP2Q06481 763 aa37.32■■■■□ 3.56
CHSY1-201ENST00000254190 TRIM41Q8WV44 630 aa37.23■■■■□ 3.55
CHSY1-201ENST00000254190 PELP1Q8IZL8 1130 aaKnown RBP37.02■■■■□ 3.52
CHSY1-201ENST00000254190 ZEB1P37275 1124 aaPredicted RBP36.95■■■■□ 3.51
CHSY1-201ENST00000254190 CCER1Q8TC90 406 aaPredicted RBP36.92■■■■□ 3.5
CHSY1-201ENST00000254190 RANGAP1P46060 587 aaPredicted RBP36.83■■■■□ 3.49
CHSY1-201ENST00000254190 CENPBP07199 599 aaPredicted RBP36.68■■■■□ 3.46
CHSY1-201ENST00000254190 PPARGC1BQ86YN6 1023 aaKnown RBP36.66■■■■□ 3.46
CHSY1-201ENST00000254190 HRCP23327 699 aa36.64■■■■□ 3.46
CHSY1-201ENST00000254190 CHIC1Q5VXU3 224 aa36.57■■■■□ 3.44
CHSY1-201ENST00000254190 LOC105371045A0A1W2PR82 267 aa36.55■■■■□ 3.44
CHSY1-201ENST00000254190 UBTFP17480 764 aaKnown RBP36.52■■■■□ 3.44
CHSY1-201ENST00000254190 TRIM26Q12899 539 aaPredicted RBP36.46■■■■□ 3.43
CHSY1-201ENST00000254190 YTHDC1Q96MU7 727 aaKnown RBP36.23■■■■□ 3.39
CHSY1-201ENST00000254190 ATP1B4Q9UN42 357 aaPredicted RBP36.09■■■■□ 3.37
CHSY1-201ENST00000254190 ERICH6Q7L0X2 663 aa35.59■■■■□ 3.29
CHSY1-201ENST00000254190 HNRNPUL2Q1KMD3 747 aaKnown RBP35.54■■■■□ 3.28
CHSY1-201ENST00000254190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.54■■■■□ 3.28
CHSY1-201ENST00000254190 NEFLP07196 543 aa35.49■■■■□ 3.27
CHSY1-201ENST00000254190 ITGAEP38570 1179 aa35.45■■■■□ 3.27
CHSY1-201ENST00000254190 DIEXFQ68CQ4 756 aaKnown RBP35.2■■■■□ 3.22
CHSY1-201ENST00000254190 MYT1Q01538 1121 aa35.12■■■■□ 3.21
CHSY1-201ENST00000254190 POLR3GLQ9BT43 218 aa34.73■■■■□ 3.15
CHSY1-201ENST00000254190 GTF3C3Q9Y5Q9 886 aa34.7■■■■□ 3.15
CHSY1-201ENST00000254190 CNGB1Q14028 1251 aaPredicted RBP34.69■■■■□ 3.14
CHSY1-201ENST00000254190 ABCC9O60706 1549 aa34.62■■■■□ 3.13
CHSY1-201ENST00000254190 PABPN1Q86U42 306 aaKnown RBP eCLIP34.61■■■■□ 3.13
CHSY1-201ENST00000254190 FAM50AQ14320 339 aaKnown RBP34.44■■■■□ 3.1
CHSY1-201ENST00000254190 ZNF316A6NFI3 1004 aaPredicted RBP34.37■■■■□ 3.09
CHSY1-201ENST00000254190 NEUROD1Q13562 356 aa34.36■■■■□ 3.09
CHSY1-201ENST00000254190 ACIN1Q9UKV3 1341 aaKnown RBP34.29■■■■□ 3.08
CHSY1-201ENST00000254190 BCANQ96GW7 911 aa34.26■■■■□ 3.07
CHSY1-201ENST00000254190 CSRNP3Q8WYN3 585 aa34.24■■■■□ 3.07
CHSY1-201ENST00000254190 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
CHSY1-201ENST00000254190 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
CHSY1-201ENST00000254190 MYT1LQ9UL68 1186 aa34.06■■■■□ 3.04
CHSY1-201ENST00000254190 TRIM52Q96A61 297 aa34.05■■■■□ 3.04
CHSY1-201ENST00000254190 DAXXQ9UER7 740 aaPredicted RBP34.04■■■■□ 3.04
CHSY1-201ENST00000254190 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
CHSY1-201ENST00000254190 ANP32CO43423 234 aa33.91■■■■□ 3.02
CHSY1-201ENST00000254190 P3H3Q8IVL6 736 aa33.84■■■■□ 3.01
CHSY1-201ENST00000254190 ZNF326Q5BKZ1 582 aaKnown RBP33.73■■■□□ 2.99
CHSY1-201ENST00000254190 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
CHSY1-201ENST00000254190 RTL5Q5HYW3 569 aaPredicted RBP33.65■■■□□ 2.98
CHSY1-201ENST00000254190 SCAF1Q9H7N4 1312 aaKnown RBP33.64■■■□□ 2.98
CHSY1-201ENST00000254190 SLC4A1APQ9BWU0 796 aaKnown RBP33.6■■■□□ 2.97
CHSY1-201ENST00000254190 CDK11AQ9UQ88 783 aaPredicted RBP33.56■■■□□ 2.96
CHSY1-201ENST00000254190 CLSPNQ9HAW4 1339 aa33.54■■■□□ 2.96
CHSY1-201ENST00000254190 ARID3CA6NKF2 412 aa33.53■■■□□ 2.96
CHSY1-201ENST00000254190 DDX10Q13206 875 aaKnown RBP33.41■■■□□ 2.94
CHSY1-201ENST00000254190 MIER1Q8N108 512 aa33.39■■■□□ 2.94
CHSY1-201ENST00000254190 FKBP8Q14318 412 aa33.38■■■□□ 2.93
CHSY1-201ENST00000254190 FBLN2P98095 1184 aa33.31■■■□□ 2.92
CHSY1-201ENST00000254190 RSF1Q96T23 1441 aaPredicted RBP33.26■■■□□ 2.91
CHSY1-201ENST00000254190 TONSLQ96HA7 1378 aa33.17■■■□□ 2.9
CHSY1-201ENST00000254190 HNRNPUQ00839 825 aaKnown RBP eCLIP33.16■■■□□ 2.9
CHSY1-201ENST00000254190 ZNF777Q9ULD5 760 aaPredicted RBP33.12■■■□□ 2.89
CHSY1-201ENST00000254190 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
CHSY1-201ENST00000254190 HIRIP3Q9BW71 556 aaPredicted RBP33.07■■■□□ 2.89
CHSY1-201ENST00000254190 CLIP1P30622 1438 aa33.05■■■□□ 2.88
CHSY1-201ENST00000254190 FAM9BQ8IZU0 186 aa33.02■■■□□ 2.88
CHSY1-201ENST00000254190 CEP162Q5TB80 1403 aa33■■■□□ 2.87
CHSY1-201ENST00000254190 CHIC2Q9UKJ5 165 aa32.97■■■□□ 2.87
CHSY1-201ENST00000254190 NPM2Q86SE8 214 aaKnown RBP32.9■■■□□ 2.86
CHSY1-201ENST00000254190 ANP32AP39687 249 aaKnown RBP32.9■■■□□ 2.86
CHSY1-201ENST00000254190 SALL2Q9Y467 1007 aaPredicted RBP32.81■■■□□ 2.84
CHSY1-201ENST00000254190 IRX6P78412 446 aaPredicted RBP32.78■■■□□ 2.84
CHSY1-201ENST00000254190 CANXP27824 592 aaKnown RBP32.78■■■□□ 2.84
CHSY1-201ENST00000254190 BCL11AQ9H165 835 aa32.74■■■□□ 2.83
CHSY1-201ENST00000254190 GOLGA3Q08378 1498 aa32.72■■■□□ 2.83
CHSY1-201ENST00000254190 MRS2Q9HD23 443 aa32.69■■■□□ 2.82
CHSY1-201ENST00000254190 EEA1Q15075 1411 aa32.69■■■□□ 2.82
CHSY1-201ENST00000254190 TNIKQ9UKE5 1360 aa32.69■■■□□ 2.82
CHSY1-201ENST00000254190 MTUS2Q5JR59 1369 aa32.64■■■□□ 2.82
CHSY1-201ENST00000254190 WRNQ14191 1432 aaPredicted RBP eCLIP32.62■■■□□ 2.81
CHSY1-201ENST00000254190 TMC1Q8TDI8 760 aa32.61■■■□□ 2.81
CHSY1-201ENST00000254190 CCDC136Q96JN2 1154 aa32.6■■■□□ 2.81
CHSY1-201ENST00000254190 RRP7BPQ9NSQ0 103 aa32.56■■■□□ 2.8
CHSY1-201ENST00000254190 CECR2Q9BXF3 1484 aa32.52■■■□□ 2.8
CHSY1-201ENST00000254190 ZBTB47Q9UFB7 747 aaPredicted RBP32.51■■■□□ 2.79
CHSY1-201ENST00000254190 KDM2AQ9Y2K7 1162 aa32.5■■■□□ 2.79
CHSY1-201ENST00000254190 EIF4G2P78344 907 aaKnown RBP eCLIP32.48■■■□□ 2.79
CHSY1-201ENST00000254190 NBR1Q14596 966 aa32.47■■■□□ 2.79
CHSY1-201ENST00000254190 SIN3AQ96ST3 1273 aa32.44■■■□□ 2.78
CHSY1-201ENST00000254190 RB1CC1Q8TDY2 1594 aa32.41■■■□□ 2.78
CHSY1-201ENST00000254190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.41■■■□□ 2.78
CHSY1-201ENST00000254190 SENP3-EIF4A1A0A087X0R7 540 aa32.41■■■□□ 2.78
CHSY1-201ENST00000254190 SOGA1O94964 1423 aa32.39■■■□□ 2.78
CHSY1-201ENST00000254190 CEP164Q9UPV0 1460 aa32.38■■■□□ 2.77
CHSY1-201ENST00000254190 CHGAP10645 457 aaKnown RBP32.34■■■□□ 2.77
CHSY1-201ENST00000254190 NEFMP07197 916 aa32.34■■■□□ 2.77
CHSY1-201ENST00000254190 SUPT16HQ9Y5B9 1047 aaKnown RBP32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms