Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.37■■□□□ 1.49
RTTNQ86VV8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.37■■□□□ 1.49
RTTNQ86VV8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
RTTNQ86VV8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTTNQ86VV8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.36■■□□□ 1.49
RTTNQ86VV8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RTTNQ86VV8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTTNQ86VV8 RPS2P35-201ENST00000443417 897 ntBASIC24.35■■□□□ 1.49
RTTNQ86VV8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTTNQ86VV8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTTNQ86VV8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RTTNQ86VV8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.34■■□□□ 1.49
RTTNQ86VV8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RTTNQ86VV8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
RTTNQ86VV8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.33■■□□□ 1.48
RTTNQ86VV8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RTTNQ86VV8 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.31■■□□□ 1.48
RTTNQ86VV8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTTNQ86VV8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTTNQ86VV8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RTTNQ86VV8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTTNQ86VV8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.26■■□□□ 1.47
RTTNQ86VV8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
RTTNQ86VV8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.26■■□□□ 1.47
RTTNQ86VV8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.26■■□□□ 1.47
RTTNQ86VV8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTTNQ86VV8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTTNQ86VV8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTTNQ86VV8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTTNQ86VV8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.22■■□□□ 1.47
RTTNQ86VV8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTTNQ86VV8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTTNQ86VV8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RTTNQ86VV8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RTTNQ86VV8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.19■■□□□ 1.46
RTTNQ86VV8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.19■■□□□ 1.46
RTTNQ86VV8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.18■■□□□ 1.46
RTTNQ86VV8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.18■■□□□ 1.46
RTTNQ86VV8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTTNQ86VV8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTTNQ86VV8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RTTNQ86VV8 RARRES2P7-201ENST00000567349 469 ntBASIC24.14■■□□□ 1.46
RTTNQ86VV8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTTNQ86VV8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.12■■□□□ 1.45
RTTNQ86VV8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTTNQ86VV8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.12■■□□□ 1.45
RTTNQ86VV8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTTNQ86VV8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTTNQ86VV8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.11■■□□□ 1.45
RTTNQ86VV8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTTNQ86VV8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTTNQ86VV8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.1■■□□□ 1.45
RTTNQ86VV8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTTNQ86VV8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RTTNQ86VV8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTTNQ86VV8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RTTNQ86VV8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RTTNQ86VV8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RTTNQ86VV8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.07■■□□□ 1.44
RTTNQ86VV8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.07■■□□□ 1.44
RTTNQ86VV8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.07■■□□□ 1.44
RTTNQ86VV8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTTNQ86VV8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTTNQ86VV8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.04■■□□□ 1.44
RTTNQ86VV8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTTNQ86VV8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTTNQ86VV8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTTNQ86VV8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTTNQ86VV8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTTNQ86VV8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.01■■□□□ 1.43
RTTNQ86VV8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RTTNQ86VV8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.99■■□□□ 1.43
RTTNQ86VV8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RTTNQ86VV8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTTNQ86VV8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTTNQ86VV8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RTTNQ86VV8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.97■■□□□ 1.43
RTTNQ86VV8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTTNQ86VV8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.97■■□□□ 1.43
RTTNQ86VV8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTTNQ86VV8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTTNQ86VV8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.96■■□□□ 1.43
RTTNQ86VV8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTTNQ86VV8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.94■■□□□ 1.42
RTTNQ86VV8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.94■■□□□ 1.42
RTTNQ86VV8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.93■■□□□ 1.42
RTTNQ86VV8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTTNQ86VV8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTTNQ86VV8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTTNQ86VV8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTTNQ86VV8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RTTNQ86VV8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.89■■□□□ 1.42
RTTNQ86VV8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTTNQ86VV8 AC097358.2-201ENST00000607541 1159 ntBASIC23.87■■□□□ 1.41
RTTNQ86VV8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTTNQ86VV8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTTNQ86VV8 AC136428.2-201ENST00000563187 214 ntBASIC23.86■■□□□ 1.41
RTTNQ86VV8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTTNQ86VV8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTTNQ86VV8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms