Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.223e-6■■■■□ 21.9
CSTF2P33240 HNMT-205ENST00000467390 532 ntTSL 24.88□□□□□ -1.639e-8■■■■□ 21.9
CSTF2P33240 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC8.46□□□□□ -1.063e-7■■■■□ 21.9
CSTF2P33240 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.948e-15■■■■□ 21.9
CSTF2P33240 NEDD8-MDP1-204ENST00000605847 758 ntTSL 515.53■□□□□ 0.088e-15■■■■□ 21.9
CSTF2P33240 NEDD8-MDP1-203ENST00000604306 681 ntTSL 511.46□□□□□ -0.578e-15■■■■□ 21.9
CSTF2P33240 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.758e-15■■■■□ 21.9
CSTF2P33240 NEDD8-205ENST00000527046 847 ntTSL 210.31□□□□□ -0.768e-15■■■■□ 21.9
CSTF2P33240 NEDD8-202ENST00000396828 626 ntTSL 210.19□□□□□ -0.788e-15■■■■□ 21.9
CSTF2P33240 NEDD8-206ENST00000531430 651 ntTSL 29.29□□□□□ -0.928e-15■■■■□ 21.9
CSTF2P33240 NEDD8-MDP1-201ENST00000530579 471 ntTSL 28.11□□□□□ -1.118e-15■■■■□ 21.9
CSTF2P33240 TRAPPC12-204ENST00000415624 815 ntAPPRIS ALT2 TSL 510.45□□□□□ -0.745e-7■■■■□ 21.9
CSTF2P33240 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.04■■□□□ 1.287e-7■■■■□ 21.9
CSTF2P33240 TMEM14B-217ENST00000489137 374 ntTSL 34.54□□□□□ -1.681e-6■■■■□ 21.9
CSTF2P33240 LINC01146-204ENST00000556033 833 ntTSL 1 (best) BASIC9.87□□□□□ -0.837e-8■■■■□ 21.8
CSTF2P33240 LINC01146-201ENST00000553496 425 ntTSL 37.74□□□□□ -1.177e-8■■■■□ 21.8
CSTF2P33240 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.3□□□□□ -1.247e-8■■■■□ 21.8
CSTF2P33240 LINC01146-205ENST00000556673 1182 ntTSL 37.13□□□□□ -1.277e-8■■■■□ 21.8
CSTF2P33240 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.89□□□□□ -1.477e-8■■■■□ 21.8
CSTF2P33240 LINC01146-202ENST00000553929 413 ntTSL 34.63□□□□□ -1.677e-8■■■■□ 21.8
CSTF2P33240 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.188e-8■■■■□ 21.8
CSTF2P33240 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.95■□□□□ 0.946e-8■■■■□ 21.8
CSTF2P33240 CAMKMT-206ENST00000428993 526 ntTSL 36.18□□□□□ -1.426e-8■■■■□ 21.8
CSTF2P33240 PDE8A-211ENST00000559742 2584 ntTSL 1 (best)17.83■□□□□ 0.442e-6■■■■□ 21.8
CSTF2P33240 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.412e-6■■■■□ 21.8
CSTF2P33240 PDE8A-204ENST00000478717 2722 ntTSL 1 (best)17.23■□□□□ 0.352e-6■■■■□ 21.8
CSTF2P33240 PDE8A-210ENST00000559086 538 ntTSL 416.98■□□□□ 0.312e-6■■■■□ 21.8
CSTF2P33240 PDE8A-205ENST00000485596 2999 ntTSL 1 (best)16.34■□□□□ 0.212e-6■■■■□ 21.8
CSTF2P33240 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.172e-6■■■■□ 21.8
CSTF2P33240 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.22e-6■■■■□ 21.8
CSTF2P33240 PDE8A-208ENST00000557957 3716 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.662e-6■■■■□ 21.8
CSTF2P33240 RPS14-207ENST00000521466 592 ntAPPRIS P1 TSL 512.13□□□□□ -0.472e-7■■■■□ 21.8
CSTF2P33240 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.22e-7■■■■□ 21.8
CSTF2P33240 PRIM2-203ENST00000419977 2197 ntTSL 24.71□□□□□ -1.652e-7■■■■□ 21.8
CSTF2P33240 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.783e-7■■■■□ 21.8
CSTF2P33240 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.993e-7■■■■□ 21.8
CSTF2P33240 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.363e-7■■■■□ 21.8
CSTF2P33240 PKP4-203ENST00000411900 552 ntTSL 49.91□□□□□ -0.821e-6■■■■□ 21.8
CSTF2P33240 PKP4-208ENST00000462335 561 ntTSL 49.38□□□□□ -0.911e-6■■■■□ 21.8
CSTF2P33240 PKP4-207ENST00000457109 520 ntTSL 38.82□□□□□ -11e-6■■■■□ 21.8
CSTF2P33240 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.181e-11■■■■□ 21.8
CSTF2P33240 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.131e-11■■■■□ 21.8
CSTF2P33240 SPIDR-214ENST00000521550 1849 ntTSL 213.15□□□□□ -0.31e-11■■■■□ 21.8
CSTF2P33240 SPIDR-217ENST00000522117 2745 ntTSL 211.99□□□□□ -0.491e-11■■■■□ 21.8
CSTF2P33240 SPIDR-211ENST00000519401 2090 ntTSL 211.55□□□□□ -0.561e-11■■■■□ 21.8
CSTF2P33240 SPIDR-212ENST00000519661 1035 ntTSL 211.18□□□□□ -0.621e-11■■■■□ 21.8
CSTF2P33240 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.731e-11■■■■□ 21.8
CSTF2P33240 SPIDR-224ENST00000524126 2614 ntTSL 1 (best)10.04□□□□□ -0.81e-11■■■■□ 21.8
CSTF2P33240 SPIDR-222ENST00000524006 970 ntTSL 510.02□□□□□ -0.811e-11■■■■□ 21.8
CSTF2P33240 SPIDR-225ENST00000524141 2761 ntTSL 29.87□□□□□ -0.831e-11■■■■□ 21.8
CSTF2P33240 SPIDR-213ENST00000521214 3577 ntTSL 27.54□□□□□ -1.21e-11■■■■□ 21.8
CSTF2P33240 SPIDR-223ENST00000524033 1023 ntTSL 27.38□□□□□ -1.231e-11■■■■□ 21.8
CSTF2P33240 PAK4-204ENST00000593480 714 ntTSL 319.57■□□□□ 0.722e-7■■■■□ 21.8
CSTF2P33240 PAK4-212ENST00000602004 564 ntTSL 418.47■□□□□ 0.552e-7■■■■□ 21.8
CSTF2P33240 PAK4-207ENST00000597766 380 ntTSL 317.93■□□□□ 0.462e-7■■■■□ 21.8
CSTF2P33240 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.29■□□□□ 0.362e-7■■■■□ 21.8
CSTF2P33240 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.75■□□□□ 0.272e-7■■■■□ 21.8
CSTF2P33240 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.222e-7■■■■□ 21.8
CSTF2P33240 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.12e-7■■■■□ 21.8
CSTF2P33240 SAMD4A-207ENST00000555112 2287 ntTSL 1 (best)20.45■□□□□ 0.869e-8■■■■□ 21.8
CSTF2P33240 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.179e-8■■■■□ 21.8
CSTF2P33240 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.48□□□□□ -0.259e-8■■■■□ 21.8
CSTF2P33240 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.37□□□□□ -0.279e-8■■■■□ 21.8
CSTF2P33240 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.329e-8■■■■□ 21.8
CSTF2P33240 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.76□□□□□ -0.379e-8■■■■□ 21.8
CSTF2P33240 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC9.91□□□□□ -0.829e-8■■■■□ 21.8
CSTF2P33240 SAMD4A-211ENST00000557013 3637 ntTSL 1 (best)7.97□□□□□ -1.139e-8■■■■□ 21.8
CSTF2P33240 SAMD4A-206ENST00000555091 547 ntTSL 47.51□□□□□ -1.219e-8■■■■□ 21.8
CSTF2P33240 SAMD4A-212ENST00000557692 1119 ntTSL 26.75□□□□□ -1.339e-8■■■■□ 21.8
CSTF2P33240 IREB2-203ENST00000558570 2917 ntTSL 1 (best)5.34□□□□□ -1.569e-8■■■■□ 21.8
CSTF2P33240 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.619e-8■■■■□ 21.8
CSTF2P33240 PKP4-204ENST00000421462 3099 ntTSL 215.92■□□□□ 0.149e-7■■■■□ 21.8
CSTF2P33240 PKP4-206ENST00000452162 2359 ntTSL 1 (best)9.91□□□□□ -0.829e-7■■■■□ 21.8
CSTF2P33240 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.42□□□□□ -1.74e-6■■■■□ 21.8
CSTF2P33240 CBR4-207ENST00000510042 1198 ntTSL 211.64□□□□□ -0.554e-7■■■■□ 21.7
CSTF2P33240 CBR4-206ENST00000509108 546 ntTSL 32.52□□□□□ -2.014e-7■■■■□ 21.7
CSTF2P33240 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.05■□□□□ 0.163e-6■■■■□ 21.7
CSTF2P33240 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.87□□□□□ -0.353e-6■■■■□ 21.7
CSTF2P33240 NF1-213ENST00000489712 543 ntTSL 42.74□□□□□ -1.973e-6■■■■□ 21.7
CSTF2P33240 DOCK4-212ENST00000476846 3218 ntTSL 513.82□□□□□ -0.21e-11■■■■□ 21.7
CSTF2P33240 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.241e-11■■■■□ 21.7
CSTF2P33240 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.591e-11■■■■□ 21.7
CSTF2P33240 DLGAP4-AS1-201ENST00000425233 443 ntTSL 515.32■□□□□ 0.042e-7■■■■□ 21.7
CSTF2P33240 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC12.66□□□□□ -0.382e-7■■■■□ 21.7
CSTF2P33240 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.016e-7■■■■□ 21.7
CSTF2P33240 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.491e-6■■■■□ 21.7
CSTF2P33240 NCOR2-207ENST00000420698 1752 ntTSL 215.29■□□□□ 0.044e-7■■■■□ 21.6
CSTF2P33240 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.329e-7■■■■□ 21.6
CSTF2P33240 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.179e-7■■■■□ 21.6
CSTF2P33240 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.97□□□□□ -0.179e-7■■■■□ 21.6
CSTF2P33240 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.879e-7■■■■□ 21.6
CSTF2P33240 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.382e-6■■■■□ 21.6
CSTF2P33240 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.027e-7■■■■□ 21.6
CSTF2P33240 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.85■□□□□ 0.939e-8■■■■□ 21.6
CSTF2P33240 MAP2K5-209ENST00000558392 1506 ntTSL 519.08■□□□□ 0.649e-8■■■■□ 21.6
CSTF2P33240 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.87■□□□□ 0.619e-8■■■■□ 21.6
CSTF2P33240 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.58e-7■■■■□ 21.6
CSTF2P33240 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.199e-8■■■■□ 21.6
CSTF2P33240 CRYBB2P1-205ENST00000609084 1693 nt14.96□□□□□ -0.018e-7■■■■□ 21.6
CSTF2P33240 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.189e-8■■■■□ 21.6
Retrieved 100 of 6,735 protein–RNA pairs in 306 ms