RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 DCAF8L2P0C7V8 631 aa12.62□□□□□ -0.39
PRDM2-201ENST00000235372 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.43
PRDM2-201ENST00000235372 FAM9AQ8IZU1 332 aaPredicted RBP11.94□□□□□ -0.5
PRDM2-201ENST00000235372 EHMT2Q96KQ7 1210 aa11.93□□□□□ -0.5
PRDM2-201ENST00000235372 ERICH6Q7L0X2 663 aa11.91□□□□□ -0.5
PRDM2-201ENST00000235372 MYT1Q01538 1121 aa11.85□□□□□ -0.51
PRDM2-201ENST00000235372 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
PRDM2-201ENST00000235372 APLP2Q06481 763 aa11.81□□□□□ -0.52
PRDM2-201ENST00000235372 SUPT5HO00267 1087 aaKnown RBP11.68□□□□□ -0.54
PRDM2-201ENST00000235372 TTBK1Q5TCY1 1321 aaPredicted RBP11.5□□□□□ -0.57
PRDM2-201ENST00000235372 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
PRDM2-201ENST00000235372 NEFLP07196 543 aa11.4□□□□□ -0.58
PRDM2-201ENST00000235372 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
PRDM2-201ENST00000235372 YTHDC1Q96MU7 727 aaKnown RBP11.34□□□□□ -0.59
PRDM2-201ENST00000235372 ATP1B4Q9UN42 357 aaPredicted RBP11.34□□□□□ -0.59
PRDM2-201ENST00000235372 SHROOM4Q9ULL8 1493 aa11.26□□□□□ -0.61
PRDM2-201ENST00000235372 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
PRDM2-201ENST00000235372 PCGF6Q9BYE7 350 aa11.21□□□□□ -0.61
PRDM2-201ENST00000235372 MYT1LQ9UL68 1186 aa11.18□□□□□ -0.62
PRDM2-201ENST00000235372 ZEB1P37275 1124 aaPredicted RBP11.11□□□□□ -0.63
PRDM2-201ENST00000235372 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
PRDM2-201ENST00000235372 CNGB1Q14028 1251 aaPredicted RBP11.03□□□□□ -0.64
PRDM2-201ENST00000235372 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
PRDM2-201ENST00000235372 POLR3GLQ9BT43 218 aa11.01□□□□□ -0.65
PRDM2-201ENST00000235372 CLSPNQ9HAW4 1339 aa10.96□□□□□ -0.65
PRDM2-201ENST00000235372 CHIC1Q5VXU3 224 aa10.96□□□□□ -0.65
PRDM2-201ENST00000235372 UBTFP17480 764 aaKnown RBP10.95□□□□□ -0.66
PRDM2-201ENST00000235372 NISCHQ9Y2I1 1504 aa10.94□□□□□ -0.66
PRDM2-201ENST00000235372 RTL5Q5HYW3 569 aaPredicted RBP10.92□□□□□ -0.66
PRDM2-201ENST00000235372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
PRDM2-201ENST00000235372 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
PRDM2-201ENST00000235372 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
PRDM2-201ENST00000235372 TRIM41Q8WV44 630 aa10.83□□□□□ -0.68
PRDM2-201ENST00000235372 BCL11AQ9H165 835 aa10.79□□□□□ -0.68
PRDM2-201ENST00000235372 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
PRDM2-201ENST00000235372 PPARGC1BQ86YN6 1023 aaKnown RBP10.74□□□□□ -0.69
PRDM2-201ENST00000235372 ITGAEP38570 1179 aa10.7□□□□□ -0.7
PRDM2-201ENST00000235372 NEFMP07197 916 aa10.61□□□□□ -0.71
PRDM2-201ENST00000235372 EIF5BO60841 1220 aaKnown RBP10.59□□□□□ -0.71
PRDM2-201ENST00000235372 CANXP27824 592 aaKnown RBP10.58□□□□□ -0.72
PRDM2-201ENST00000235372 BCANQ96GW7 911 aa10.58□□□□□ -0.72
PRDM2-201ENST00000235372 ANP32BQ92688 251 aaKnown RBP10.55□□□□□ -0.72
PRDM2-201ENST00000235372 CDK11BP21127 795 aaKnown RBP10.55□□□□□ -0.72
PRDM2-201ENST00000235372 CDK11AQ9UQ88 783 aaPredicted RBP10.55□□□□□ -0.72
PRDM2-201ENST00000235372 TRIM52Q96A61 297 aa10.45□□□□□ -0.74
PRDM2-201ENST00000235372 HSP90AA1P07900 732 aaKnown RBP10.43□□□□□ -0.74
PRDM2-201ENST00000235372 TRIM26Q12899 539 aaPredicted RBP10.43□□□□□ -0.74
PRDM2-201ENST00000235372 GLIPR1L2Q4G1C9 344 aa10.4□□□□□ -0.74
PRDM2-201ENST00000235372 FAM50AQ14320 339 aaKnown RBP10.38□□□□□ -0.75
PRDM2-201ENST00000235372 ZNF326Q5BKZ1 582 aaKnown RBP10.37□□□□□ -0.75
PRDM2-201ENST00000235372 ARXQ96QS3 562 aa10.36□□□□□ -0.75
PRDM2-201ENST00000235372 ANP32AP39687 249 aaKnown RBP10.36□□□□□ -0.75
PRDM2-201ENST00000235372 ESF1Q9H501 851 aaKnown RBP10.36□□□□□ -0.75
PRDM2-201ENST00000235372 ANP32CO43423 234 aa10.34□□□□□ -0.75
PRDM2-201ENST00000235372 HRCP23327 699 aa10.33□□□□□ -0.76
PRDM2-201ENST00000235372 UPF2Q9HAU5 1272 aaKnown RBP10.32□□□□□ -0.76
PRDM2-201ENST00000235372 NPM2Q86SE8 214 aaKnown RBP10.31□□□□□ -0.76
PRDM2-201ENST00000235372 NEUROD1Q13562 356 aa10.3□□□□□ -0.76
PRDM2-201ENST00000235372 DIEXFQ68CQ4 756 aaKnown RBP10.26□□□□□ -0.77
PRDM2-201ENST00000235372 AMER1Q5JTC6 1135 aaPredicted RBP10.26□□□□□ -0.77
PRDM2-201ENST00000235372 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
PRDM2-201ENST00000235372 A0A0G2JS52 829 aa10.24□□□□□ -0.77
PRDM2-201ENST00000235372 PLPPR3Q6T4P5 718 aa10.23□□□□□ -0.77
PRDM2-201ENST00000235372 SCAF1Q9H7N4 1312 aaKnown RBP10.22□□□□□ -0.77
PRDM2-201ENST00000235372 FBLN2P98095 1184 aa10.2□□□□□ -0.78
PRDM2-201ENST00000235372 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
PRDM2-201ENST00000235372 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
PRDM2-201ENST00000235372 TNNT2P45379 298 aaPredicted RBP10.13□□□□□ -0.79
PRDM2-201ENST00000235372 NBR1Q14596 966 aa10.12□□□□□ -0.79
PRDM2-201ENST00000235372 MYH16Q9H6N6 1097 aa10.12□□□□□ -0.79
PRDM2-201ENST00000235372 ZRSR1Q15695 479 aaKnown RBP10.12□□□□□ -0.79
PRDM2-201ENST00000235372 NCLP19338 710 aaKnown RBP10.12□□□□□ -0.79
PRDM2-201ENST00000235372 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
PRDM2-201ENST00000235372 CHGAP10645 457 aaKnown RBP10.11□□□□□ -0.79
PRDM2-201ENST00000235372 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.1□□□□□ -0.79
PRDM2-201ENST00000235372 TRIM44Q96DX7 344 aaPredicted RBP10.08□□□□□ -0.8
PRDM2-201ENST00000235372 TPRNQ4KMQ1 711 aa10.08□□□□□ -0.8
PRDM2-201ENST00000235372 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
PRDM2-201ENST00000235372 ZNF777Q9ULD5 760 aaPredicted RBP10.03□□□□□ -0.8
PRDM2-201ENST00000235372 NPHP1O15259 732 aa10.03□□□□□ -0.8
PRDM2-201ENST00000235372 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
PRDM2-201ENST00000235372 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
PRDM2-201ENST00000235372 CLSTN1O94985 981 aa10□□□□□ -0.81
PRDM2-201ENST00000235372 C14orf37Q86TY3 774 aa10□□□□□ -0.81
PRDM2-201ENST00000235372 GOLGA6L22H0YM25 854 aa10□□□□□ -0.81
PRDM2-201ENST00000235372 WDR43Q15061 677 aaKnown RBP eCLIP9.99□□□□□ -0.81
PRDM2-201ENST00000235372 PTMAP06454 111 aaKnown RBP9.99□□□□□ -0.81
PRDM2-201ENST00000235372 GOLGA6L6A8MZA4 724 aa9.98□□□□□ -0.81
PRDM2-201ENST00000235372 DNTTIP2Q5QJE6 756 aaKnown RBP9.98□□□□□ -0.81
PRDM2-201ENST00000235372 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
PRDM2-201ENST00000235372 TAOK2Q9UL54 1235 aa9.97□□□□□ -0.81
PRDM2-201ENST00000235372 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
PRDM2-201ENST00000235372 ANP32EQ9BTT0 268 aa9.97□□□□□ -0.81
PRDM2-201ENST00000235372 PRM3Q9NNZ6 103 aa9.97□□□□□ -0.81
PRDM2-201ENST00000235372 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
PRDM2-201ENST00000235372 CASC1Q6TDU7 716 aa9.97□□□□□ -0.81
PRDM2-201ENST00000235372 KAT6BQ8WYB5 2073 aa9.97□□□□□ -0.81
PRDM2-201ENST00000235372 BECN1Q14457 450 aa9.95□□□□□ -0.82
PRDM2-201ENST00000235372 ARID3CA6NKF2 412 aa9.95□□□□□ -0.82
PRDM2-201ENST00000235372 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms