Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.06■■■□□ 2.88not detected
CSTF2P33240 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.45■■■□□ 2.79not detected
CSTF2P33240 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74not detected
CSTF2P33240 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71not detected
CSTF2P33240 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71not detected
CSTF2P33240 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.94■■■□□ 2.7not detected
CSTF2P33240 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.78e-7■■■■■ 29.8
CSTF2P33240 AL356512.1-201ENST00000607453 1739 ntBASIC31.72■■■□□ 2.67not detected
CSTF2P33240 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58not detected
CSTF2P33240 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.01■■■□□ 2.55not detected
CSTF2P33240 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.95■■■□□ 2.55not detected
CSTF2P33240 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.92■■■□□ 2.54not detected
CSTF2P33240 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54not detected
CSTF2P33240 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.88■■■□□ 2.53not detected
CSTF2P33240 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.77■■■□□ 2.52not detected
CSTF2P33240 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5not detected
CSTF2P33240 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49not detected
CSTF2P33240 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.59■■■□□ 2.49not detected
CSTF2P33240 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.5■■■□□ 2.47not detected
CSTF2P33240 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.38■■■□□ 2.45not detected
CSTF2P33240 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45not detected
CSTF2P33240 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44not detected
CSTF2P33240 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.26■■■□□ 2.44not detected
CSTF2P33240 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43not detected
CSTF2P33240 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42not detected
CSTF2P33240 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.15■■■□□ 2.42not detected
CSTF2P33240 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.12■■■□□ 2.41not detected
CSTF2P33240 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41not detected
CSTF2P33240 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.09■■■□□ 2.41not detected
CSTF2P33240 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4not detected
CSTF2P33240 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4not detected
CSTF2P33240 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39not detected
CSTF2P33240 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.87■■■□□ 2.37not detected
CSTF2P33240 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36not detected
CSTF2P33240 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34not detected
CSTF2P33240 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.47■■■□□ 2.31not detected
CSTF2P33240 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.46■■■□□ 2.31not detected
CSTF2P33240 AC006077.2-201ENST00000623591 457 ntBASIC29.46■■■□□ 2.31not detected
CSTF2P33240 AC015813.7-201ENST00000623294 581 ntBASIC29.45■■■□□ 2.31not detected
CSTF2P33240 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.45■■■□□ 2.31e-6■□□□□ 11.1
CSTF2P33240 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3not detected
CSTF2P33240 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3not detected
CSTF2P33240 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.41■■■□□ 2.3not detected
CSTF2P33240 ZNRF2P1-201ENST00000441407 443 ntBASIC29.4■■■□□ 2.3not detected
CSTF2P33240 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29not detected
CSTF2P33240 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29not detected
CSTF2P33240 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28not detected
CSTF2P33240 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27not detected
CSTF2P33240 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27not detected
CSTF2P33240 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.19■■■□□ 2.26not detected
CSTF2P33240 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.19■■■□□ 2.26not detected
CSTF2P33240 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25not detected
CSTF2P33240 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24not detected
CSTF2P33240 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.99■■■□□ 2.23not detected
CSTF2P33240 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.97■■■□□ 2.23not detected
CSTF2P33240 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.9■■■□□ 2.223e-6■■■□□ 18.3
CSTF2P33240 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21not detected
CSTF2P33240 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.78■■■□□ 2.2not detected
CSTF2P33240 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2not detected
CSTF2P33240 AP002365.1-201ENST00000603448 772 ntBASIC28.67■■■□□ 2.18not detected
CSTF2P33240 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.66■■■□□ 2.18not detected
CSTF2P33240 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.66■■■□□ 2.18not detected
CSTF2P33240 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.64■■■□□ 2.18not detected
CSTF2P33240 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17not detected
CSTF2P33240 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17not detected
CSTF2P33240 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.59■■■□□ 2.17not detected
CSTF2P33240 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.58■■■□□ 2.173e-8■■■■■ 39.8
CSTF2P33240 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.57■■■□□ 2.16not detected
CSTF2P33240 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16not detected
CSTF2P33240 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.56■■■□□ 2.16not detected
CSTF2P33240 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16not detected
CSTF2P33240 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16not detected
CSTF2P33240 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16not detected
CSTF2P33240 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.51■■■□□ 2.15not detected
CSTF2P33240 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.49■■■□□ 2.15not detected
CSTF2P33240 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15not detected
CSTF2P33240 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15not detected
CSTF2P33240 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15not detected
CSTF2P33240 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.46■■■□□ 2.15not detected
CSTF2P33240 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.45■■■□□ 2.14not detected
CSTF2P33240 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.45■■■□□ 2.14not detected
CSTF2P33240 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14not detected
CSTF2P33240 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.41■■■□□ 2.14not detected
CSTF2P33240 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.4■■■□□ 2.14not detected
CSTF2P33240 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.39■■■□□ 2.143e-17■■■■□ 25
CSTF2P33240 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.36■■■□□ 2.13not detected
CSTF2P33240 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13not detected
CSTF2P33240 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13not detected
CSTF2P33240 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13not detected
CSTF2P33240 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.32■■■□□ 2.12not detected
CSTF2P33240 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.31■■■□□ 2.12not detected
CSTF2P33240 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12not detected
CSTF2P33240 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12not detected
CSTF2P33240 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11not detected
CSTF2P33240 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.22■■■□□ 2.11not detected
CSTF2P33240 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1not detected
CSTF2P33240 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1not detected
CSTF2P33240 DYNLL1-208ENST00000550178 581 ntBASIC28.17■■■□□ 2.1not detected
CSTF2P33240 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09not detected
CSTF2P33240 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09not detected
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms