RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
SPIDR-206ENST00000518074 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
SPIDR-206ENST00000518074 ABCC9O60706 1549 aa22.46■■□□□ 1.19
SPIDR-206ENST00000518074 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
SPIDR-206ENST00000518074 NACADO15069 1562 aa21.61■■□□□ 1.05
SPIDR-206ENST00000518074 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
SPIDR-206ENST00000518074 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
SPIDR-206ENST00000518074 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
SPIDR-206ENST00000518074 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
SPIDR-206ENST00000518074 UNC13AQ9UPW8 1703 aa21.11■□□□□ 0.97
SPIDR-206ENST00000518074 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
SPIDR-206ENST00000518074 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
SPIDR-206ENST00000518074 SHROOM4Q9ULL8 1493 aa20.9■□□□□ 0.94
SPIDR-206ENST00000518074 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
SPIDR-206ENST00000518074 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
SPIDR-206ENST00000518074 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
SPIDR-206ENST00000518074 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
SPIDR-206ENST00000518074 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
SPIDR-206ENST00000518074 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
SPIDR-206ENST00000518074 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
SPIDR-206ENST00000518074 BAZ1AQ9NRL2 1556 aaPredicted RBP19.88■□□□□ 0.77
SPIDR-206ENST00000518074 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
SPIDR-206ENST00000518074 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
SPIDR-206ENST00000518074 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
SPIDR-206ENST00000518074 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
SPIDR-206ENST00000518074 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
SPIDR-206ENST00000518074 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
SPIDR-206ENST00000518074 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
SPIDR-206ENST00000518074 WIZO95785 1651 aa19.43■□□□□ 0.7
SPIDR-206ENST00000518074 CUX2O14529 1486 aa19.41■□□□□ 0.7
SPIDR-206ENST00000518074 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
SPIDR-206ENST00000518074 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
SPIDR-206ENST00000518074 NESP48681 1621 aa19.37■□□□□ 0.69
SPIDR-206ENST00000518074 TOP2AP11388 1531 aaKnown RBP19.29■□□□□ 0.68
SPIDR-206ENST00000518074 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
SPIDR-206ENST00000518074 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
SPIDR-206ENST00000518074 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
SPIDR-206ENST00000518074 KIF21AQ7Z4S6 1674 aa19.19■□□□□ 0.66
SPIDR-206ENST00000518074 CFTRP13569 1480 aa19.14■□□□□ 0.66
SPIDR-206ENST00000518074 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
SPIDR-206ENST00000518074 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
SPIDR-206ENST00000518074 WDR62O43379 1518 aa19.06■□□□□ 0.64
SPIDR-206ENST00000518074 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
SPIDR-206ENST00000518074 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
SPIDR-206ENST00000518074 PRDM2Q13029 1718 aa19.03■□□□□ 0.64
SPIDR-206ENST00000518074 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.64
SPIDR-206ENST00000518074 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
SPIDR-206ENST00000518074 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
SPIDR-206ENST00000518074 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
SPIDR-206ENST00000518074 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
SPIDR-206ENST00000518074 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
SPIDR-206ENST00000518074 IFT140Q96RY7 1462 aa18.7■□□□□ 0.58
SPIDR-206ENST00000518074 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
SPIDR-206ENST00000518074 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
SPIDR-206ENST00000518074 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
SPIDR-206ENST00000518074 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
SPIDR-206ENST00000518074 EIF4G3O43432 1585 aaKnown RBP18.49■□□□□ 0.55
SPIDR-206ENST00000518074 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
SPIDR-206ENST00000518074 CUX1P39880 1505 aa18.48■□□□□ 0.55
SPIDR-206ENST00000518074 SOGA1O94964 1423 aa18.45■□□□□ 0.54
SPIDR-206ENST00000518074 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
SPIDR-206ENST00000518074 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
SPIDR-206ENST00000518074 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.54
SPIDR-206ENST00000518074 BIVM-ERCC5R4GMW8 1640 aa18.33■□□□□ 0.52
SPIDR-206ENST00000518074 ABCA10Q8WWZ4 1543 aa18.32■□□□□ 0.52
SPIDR-206ENST00000518074 TDRD9Q8NDG6 1382 aaKnown RBP18.31■□□□□ 0.52
SPIDR-206ENST00000518074 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
SPIDR-206ENST00000518074 GRIN2BQ13224 1484 aa18.3■□□□□ 0.52
SPIDR-206ENST00000518074 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
SPIDR-206ENST00000518074 CHD1O14646 1710 aa18.3■□□□□ 0.52
SPIDR-206ENST00000518074 WRNQ14191 1432 aaPredicted RBP eCLIP18.28■□□□□ 0.52
SPIDR-206ENST00000518074 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
SPIDR-206ENST00000518074 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
SPIDR-206ENST00000518074 SNAPC4Q5SXM2 1469 aa18.25■□□□□ 0.51
SPIDR-206ENST00000518074 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
SPIDR-206ENST00000518074 PBRM1Q86U86 1689 aa18.23■□□□□ 0.51
SPIDR-206ENST00000518074 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
SPIDR-206ENST00000518074 RIMBP3CA6NJZ7 1639 aa18.21■□□□□ 0.51
SPIDR-206ENST00000518074 RIMBP3BA6NNM3 1639 aa18.21■□□□□ 0.51
SPIDR-206ENST00000518074 RIMBP3Q9UFD9 1639 aa18.21■□□□□ 0.51
SPIDR-206ENST00000518074 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
SPIDR-206ENST00000518074 ARHGEF11O15085 1522 aa18.18■□□□□ 0.5
SPIDR-206ENST00000518074 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
SPIDR-206ENST00000518074 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-206ENST00000518074 FBLN2P98095 1184 aa18.14■□□□□ 0.5
SPIDR-206ENST00000518074 TRIM41Q8WV44 630 aa18.13■□□□□ 0.49
SPIDR-206ENST00000518074 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
SPIDR-206ENST00000518074 ADAMTS12P58397 1594 aa18.08■□□□□ 0.49
SPIDR-206ENST00000518074 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
SPIDR-206ENST00000518074 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
SPIDR-206ENST00000518074 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.48
SPIDR-206ENST00000518074 NUP160Q12769 1436 aa18.01■□□□□ 0.47
SPIDR-206ENST00000518074 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
SPIDR-206ENST00000518074 MYT1Q01538 1121 aa17.97■□□□□ 0.47
SPIDR-206ENST00000518074 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
SPIDR-206ENST00000518074 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
SPIDR-206ENST00000518074 CYB5RLQ6IPT4 315 aa17.94■□□□□ 0.46
SPIDR-206ENST00000518074 SHROOM2Q13796 1616 aa17.92■□□□□ 0.46
SPIDR-206ENST00000518074 CUL7Q14999 1698 aa17.9■□□□□ 0.46
SPIDR-206ENST00000518074 IGF1RP08069 1367 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms