RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 NISCHQ9Y2I1 1504 aa28.82■■■□□ 2.2
CUL1-201ENST00000325222 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
CUL1-201ENST00000325222 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.57
CUL1-201ENST00000325222 MYO15BQ96JP2 1530 aa24.57■■□□□ 1.52
CUL1-201ENST00000325222 HRCP23327 699 aa24.53■■□□□ 1.52
CUL1-201ENST00000325222 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
CUL1-201ENST00000325222 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
CUL1-201ENST00000325222 PCGF6Q9BYE7 350 aa24.21■■□□□ 1.47
CUL1-201ENST00000325222 PPARGC1BQ86YN6 1023 aaKnown RBP24.12■■□□□ 1.45
CUL1-201ENST00000325222 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
CUL1-201ENST00000325222 DCAF8L2P0C7V8 631 aa23.91■■□□□ 1.42
CUL1-201ENST00000325222 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.41
CUL1-201ENST00000325222 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
CUL1-201ENST00000325222 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
CUL1-201ENST00000325222 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
CUL1-201ENST00000325222 ABCC9O60706 1549 aa23.18■■□□□ 1.3
CUL1-201ENST00000325222 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
CUL1-201ENST00000325222 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
CUL1-201ENST00000325222 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
CUL1-201ENST00000325222 SCAF1Q9H7N4 1312 aaKnown RBP23.02■■□□□ 1.28
CUL1-201ENST00000325222 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
CUL1-201ENST00000325222 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
CUL1-201ENST00000325222 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
CUL1-201ENST00000325222 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
CUL1-201ENST00000325222 MYT1Q01538 1121 aa22.72■■□□□ 1.23
CUL1-201ENST00000325222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
CUL1-201ENST00000325222 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
CUL1-201ENST00000325222 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
CUL1-201ENST00000325222 MROH2BQ7Z745 1585 aa22.53■■□□□ 1.2
CUL1-201ENST00000325222 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
CUL1-201ENST00000325222 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
CUL1-201ENST00000325222 WIZO95785 1651 aa22.43■■□□□ 1.18
CUL1-201ENST00000325222 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
CUL1-201ENST00000325222 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
CUL1-201ENST00000325222 GTF3C3Q9Y5Q9 886 aa22.31■■□□□ 1.16
CUL1-201ENST00000325222 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
CUL1-201ENST00000325222 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
CUL1-201ENST00000325222 NACADO15069 1562 aa22.2■■□□□ 1.14
CUL1-201ENST00000325222 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.145e-6■■■□□ 14.8
CUL1-201ENST00000325222 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
CUL1-201ENST00000325222 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
CUL1-201ENST00000325222 CENPBP07199 599 aaPredicted RBP22.15■■□□□ 1.14
CUL1-201ENST00000325222 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
CUL1-201ENST00000325222 SOGA1O94964 1423 aa22.07■■□□□ 1.12
CUL1-201ENST00000325222 ZNF316A6NFI3 1004 aaPredicted RBP22.01■■□□□ 1.11
CUL1-201ENST00000325222 TNIKQ9UKE5 1360 aa22.01■■□□□ 1.11
CUL1-201ENST00000325222 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
CUL1-201ENST00000325222 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
CUL1-201ENST00000325222 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
CUL1-201ENST00000325222 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
CUL1-201ENST00000325222 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
CUL1-201ENST00000325222 MIER1Q8N108 512 aa21.88■■□□□ 1.09
CUL1-201ENST00000325222 UBTFP17480 764 aaKnown RBP21.87■■□□□ 1.09
CUL1-201ENST00000325222 SMARCA4P51532 1647 aa21.83■■□□□ 1.09
CUL1-201ENST00000325222 EEA1Q15075 1411 aa21.78■■□□□ 1.08
CUL1-201ENST00000325222 HNRNPUL2Q1KMD3 747 aaKnown RBP21.78■■□□□ 1.08
CUL1-201ENST00000325222 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
CUL1-201ENST00000325222 CLIP1P30622 1438 aa21.58■■□□□ 1.05
CUL1-201ENST00000325222 UNC13AQ9UPW8 1703 aa21.57■■□□□ 1.04
CUL1-201ENST00000325222 CEP164Q9UPV0 1460 aa21.57■■□□□ 1.04
CUL1-201ENST00000325222 SYNJ1O43426 1573 aa21.55■■□□□ 1.04
CUL1-201ENST00000325222 KIF21BO75037 1637 aa21.54■■□□□ 1.04
CUL1-201ENST00000325222 VPS8Q8N3P4 1428 aa21.54■■□□□ 1.04
CUL1-201ENST00000325222 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
CUL1-201ENST00000325222 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
CUL1-201ENST00000325222 BCL11AQ9H165 835 aa21.44■■□□□ 1.02
CUL1-201ENST00000325222 DHX57Q6P158 1386 aaKnown RBP21.39■■□□□ 1.01
CUL1-201ENST00000325222 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
CUL1-201ENST00000325222 PABPN1Q86U42 306 aaKnown RBP eCLIP21.38■■□□□ 1.01
CUL1-201ENST00000325222 APLP2Q06481 763 aa21.37■■□□□ 1.01
CUL1-201ENST00000325222 SUPT16HQ9Y5B9 1047 aaKnown RBP21.36■■□□□ 1.01
CUL1-201ENST00000325222 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
CUL1-201ENST00000325222 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
CUL1-201ENST00000325222 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
CUL1-201ENST00000325222 CLSPNQ9HAW4 1339 aa21.27■■□□□ 1
CUL1-201ENST00000325222 ARAP1Q96P48 1450 aa21.23■□□□□ 0.99
CUL1-201ENST00000325222 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
CUL1-201ENST00000325222 TSHZ2Q9NRE2 1034 aa21.18■□□□□ 0.98
CUL1-201ENST00000325222 KCNH8Q96L42 1107 aa21.16■□□□□ 0.98
CUL1-201ENST00000325222 TOP2BQ02880 1626 aa21.14■□□□□ 0.98
CUL1-201ENST00000325222 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
CUL1-201ENST00000325222 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
CUL1-201ENST00000325222 ANP32EQ9BTT0 268 aa21.08■□□□□ 0.97
CUL1-201ENST00000325222 ERICH3Q5RHP9 1530 aa21.08■□□□□ 0.96
CUL1-201ENST00000325222 CUX2O14529 1486 aa21.07■□□□□ 0.96
CUL1-201ENST00000325222 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
CUL1-201ENST00000325222 ITGAEP38570 1179 aa21.01■□□□□ 0.95
CUL1-201ENST00000325222 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
CUL1-201ENST00000325222 MAPKBP1O60336 1514 aa20.97■□□□□ 0.95
CUL1-201ENST00000325222 ARHGAP35Q9NRY4 1499 aa20.95■□□□□ 0.94
CUL1-201ENST00000325222 BCANQ96GW7 911 aa20.94■□□□□ 0.94
CUL1-201ENST00000325222 RAB3GAP2Q9H2M9 1393 aa20.94■□□□□ 0.94
CUL1-201ENST00000325222 CUX1P39880 1505 aa20.91■□□□□ 0.94
CUL1-201ENST00000325222 PRKCSHP14314 528 aaPredicted RBP20.87■□□□□ 0.93
CUL1-201ENST00000325222 DDX10Q13206 875 aaKnown RBP20.86■□□□□ 0.93
CUL1-201ENST00000325222 FKBP8Q14318 412 aa20.85■□□□□ 0.93
CUL1-201ENST00000325222 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
CUL1-201ENST00000325222 SIN3AQ96ST3 1273 aa20.84■□□□□ 0.93
CUL1-201ENST00000325222 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
CUL1-201ENST00000325222 PPP1R15AO75807 674 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms