RNA–Protein interactions for RNA: ENST00000321944.8

PAK4-201, Transcript of p21 (RAC1) activated kinase 4, humanhuman

TSL 1 (best) BASIC

Gene PAK4, Length 2,555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK4-201ENST00000321944 NISCHQ9Y2I1 1504 aa36.23■■■■□ 3.39
PAK4-201ENST00000321944 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
PAK4-201ENST00000321944 SUPT5HO00267 1087 aaKnown RBP30.82■■■□□ 2.52
PAK4-201ENST00000321944 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
PAK4-201ENST00000321944 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
PAK4-201ENST00000321944 HRCP23327 699 aa30.31■■■□□ 2.44
PAK4-201ENST00000321944 MYO15BQ96JP2 1530 aa30.21■■■□□ 2.43
PAK4-201ENST00000321944 DCAF8L2P0C7V8 631 aa30.19■■■□□ 2.42
PAK4-201ENST00000321944 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
PAK4-201ENST00000321944 PCGF6Q9BYE7 350 aa29.93■■■□□ 2.38
PAK4-201ENST00000321944 PPARGC1BQ86YN6 1023 aaKnown RBP29.76■■■□□ 2.36
PAK4-201ENST00000321944 DCAF1Q9Y4B6 1507 aa29.64■■■□□ 2.34
PAK4-201ENST00000321944 LOC105371045A0A1W2PR82 267 aa29.32■■■□□ 2.28
PAK4-201ENST00000321944 TRIM26Q12899 539 aaPredicted RBP29.05■■■□□ 2.24
PAK4-201ENST00000321944 ABCC9O60706 1549 aa28.99■■■□□ 2.23
PAK4-201ENST00000321944 SCRIBQ14160 1630 aa28.84■■■□□ 2.21
PAK4-201ENST00000321944 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
PAK4-201ENST00000321944 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
PAK4-201ENST00000321944 ZEB1P37275 1124 aaPredicted RBP28.63■■■□□ 2.17
PAK4-201ENST00000321944 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
PAK4-201ENST00000321944 PELP1Q8IZL8 1130 aaKnown RBP28.5■■■□□ 2.15
PAK4-201ENST00000321944 FAM9AQ8IZU1 332 aaPredicted RBP28.49■■■□□ 2.15
PAK4-201ENST00000321944 SCAF1Q9H7N4 1312 aaKnown RBP28.46■■■□□ 2.15
PAK4-201ENST00000321944 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
PAK4-201ENST00000321944 EHMT2Q96KQ7 1210 aa28.3■■■□□ 2.12
PAK4-201ENST00000321944 NACADO15069 1562 aa28.25■■■□□ 2.11
PAK4-201ENST00000321944 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
PAK4-201ENST00000321944 WIZO95785 1651 aa28.07■■■□□ 2.08
PAK4-201ENST00000321944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.91■■■□□ 2.06
PAK4-201ENST00000321944 ACIN1Q9UKV3 1341 aaKnown RBP27.88■■■□□ 2.05
PAK4-201ENST00000321944 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
PAK4-201ENST00000321944 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
PAK4-201ENST00000321944 CCER1Q8TC90 406 aaPredicted RBP27.82■■■□□ 2.04
PAK4-201ENST00000321944 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
PAK4-201ENST00000321944 DIEXFQ68CQ4 756 aaKnown RBP27.64■■■□□ 2.02
PAK4-201ENST00000321944 GTF3C3Q9Y5Q9 886 aa27.64■■■□□ 2.02
PAK4-201ENST00000321944 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
PAK4-201ENST00000321944 ABCC8Q09428 1581 aa27.59■■■□□ 2.01
PAK4-201ENST00000321944 CENPBP07199 599 aaPredicted RBP27.55■■■□□ 2
PAK4-201ENST00000321944 CCDC88BA6NC98 1476 aa27.55■■■□□ 2
PAK4-201ENST00000321944 TTBK1Q5TCY1 1321 aaPredicted RBP27.53■■■□□ 2
PAK4-201ENST00000321944 SMARCA4P51532 1647 aa27.52■■■□□ 2
PAK4-201ENST00000321944 SMARCA2P51531 1590 aa27.47■■□□□ 1.99
PAK4-201ENST00000321944 SOGA1O94964 1423 aa27.41■■□□□ 1.98
PAK4-201ENST00000321944 CEP162Q5TB80 1403 aa27.4■■□□□ 1.98
PAK4-201ENST00000321944 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.98
PAK4-201ENST00000321944 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
PAK4-201ENST00000321944 UNC13AQ9UPW8 1703 aa27.32■■□□□ 1.96
PAK4-201ENST00000321944 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
PAK4-201ENST00000321944 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
PAK4-201ENST00000321944 RUSC2Q8N2Y8 1516 aa27.26■■□□□ 1.95
PAK4-201ENST00000321944 EEA1Q15075 1411 aa27.23■■□□□ 1.95
PAK4-201ENST00000321944 MYT1Q01538 1121 aa27.21■■□□□ 1.95
PAK4-201ENST00000321944 ZNF316A6NFI3 1004 aaPredicted RBP27.21■■□□□ 1.95
PAK4-201ENST00000321944 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
PAK4-201ENST00000321944 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
PAK4-201ENST00000321944 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
PAK4-201ENST00000321944 MIER1Q8N108 512 aa27■■□□□ 1.91
PAK4-201ENST00000321944 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
PAK4-201ENST00000321944 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
PAK4-201ENST00000321944 CEP164Q9UPV0 1460 aa26.91■■□□□ 1.9
PAK4-201ENST00000321944 SYNJ1O43426 1573 aa26.9■■□□□ 1.9
PAK4-201ENST00000321944 HNRNPUL2Q1KMD3 747 aaKnown RBP26.89■■□□□ 1.9
PAK4-201ENST00000321944 CLIP1P30622 1438 aa26.83■■□□□ 1.89
PAK4-201ENST00000321944 KIF21BO75037 1637 aa26.83■■□□□ 1.89
PAK4-201ENST00000321944 ATAD2BQ9ULI0 1458 aa26.78■■□□□ 1.88
PAK4-201ENST00000321944 BAZ1BQ9UIG0 1483 aaKnown RBP26.73■■□□□ 1.87
PAK4-201ENST00000321944 VPS8Q8N3P4 1428 aa26.73■■□□□ 1.87
PAK4-201ENST00000321944 RANGAP1P46060 587 aaPredicted RBP26.73■■□□□ 1.87
PAK4-201ENST00000321944 APLP2Q06481 763 aa26.72■■□□□ 1.87
PAK4-201ENST00000321944 RAPGEF2Q9Y4G8 1499 aa26.71■■□□□ 1.87
PAK4-201ENST00000321944 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
PAK4-201ENST00000321944 SUPT16HQ9Y5B9 1047 aaKnown RBP26.41■■□□□ 1.82
PAK4-201ENST00000321944 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
PAK4-201ENST00000321944 PRXQ9BXM0 1461 aa26.37■■□□□ 1.81
PAK4-201ENST00000321944 ERICH3Q5RHP9 1530 aa26.35■■□□□ 1.81
PAK4-201ENST00000321944 DHX57Q6P158 1386 aaKnown RBP26.34■■□□□ 1.81
PAK4-201ENST00000321944 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
PAK4-201ENST00000321944 KANK4Q5T7N3 995 aaPredicted RBP26.33■■□□□ 1.81
PAK4-201ENST00000321944 CLSPNQ9HAW4 1339 aa26.31■■□□□ 1.8
PAK4-201ENST00000321944 CUX1P39880 1505 aa26.23■■□□□ 1.79
PAK4-201ENST00000321944 KIF27Q86VH2 1401 aa26.21■■□□□ 1.79
PAK4-201ENST00000321944 TSHZ2Q9NRE2 1034 aa26.18■■□□□ 1.78
PAK4-201ENST00000321944 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
PAK4-201ENST00000321944 HMGXB3Q12766 1538 aa26.15■■□□□ 1.78
PAK4-201ENST00000321944 RRBP1Q9P2E9 1410 aaKnown RBP26.14■■□□□ 1.77
PAK4-201ENST00000321944 ARHGAP35Q9NRY4 1499 aa26.07■■□□□ 1.76
PAK4-201ENST00000321944 CFTRP13569 1480 aa26.07■■□□□ 1.76
PAK4-201ENST00000321944 ITGAEP38570 1179 aa26.06■■□□□ 1.76
PAK4-201ENST00000321944 CCNB3Q8WWL7 1395 aa26.06■■□□□ 1.76
PAK4-201ENST00000321944 KCNH8Q96L42 1107 aa26.04■■□□□ 1.76
PAK4-201ENST00000321944 ANP32EQ9BTT0 268 aa26.01■■□□□ 1.75
PAK4-201ENST00000321944 CUX2O14529 1486 aa25.99■■□□□ 1.75
PAK4-201ENST00000321944 BCANQ96GW7 911 aa25.96■■□□□ 1.75
PAK4-201ENST00000321944 IGF1RP08069 1367 aa25.92■■□□□ 1.74
PAK4-201ENST00000321944 RAB3GAP2Q9H2M9 1393 aa25.87■■□□□ 1.73
PAK4-201ENST00000321944 CARMIL1Q5VZK9 1371 aa25.83■■□□□ 1.72
PAK4-201ENST00000321944 FKBP8Q14318 412 aa25.82■■□□□ 1.72
PAK4-201ENST00000321944 TIAM1Q13009 1591 aa25.81■■□□□ 1.72
PAK4-201ENST00000321944 MAPKBP1O60336 1514 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 426 ms