Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 MALAT1-216ENST00000620465 333 ntTSL 23.16□□□□□ -1.91e-323■■■□□ 16.2
CSTF2P33240 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.09□□□□□ -1.911e-323■■■□□ 14.6
CSTF2P33240 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.082e-123■■■■■ 317.5
CSTF2P33240 SRSF1-203ENST00000581497 438 ntTSL 37.73□□□□□ -1.172e-107■■■■■ 111.2
CSTF2P33240 MALAT1-202ENST00000534336 8708 ntBASIC9.08□□□□□ -0.963e-79■■■□□ 16
CSTF2P33240 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC7.23□□□□□ -1.253e-79■■■□□ 16
CSTF2P33240 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.99□□□□□ -1.453e-79■■■□□ 16
CSTF2P33240 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC10.03□□□□□ -0.81e-57■■■■■ 72.5
CSTF2P33240 SNHG3-201ENST00000413987 2201 ntTSL 1 (best)9.41□□□□□ -0.98e-46■■■■■ 44.8
CSTF2P33240 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.9■■□□□ 1.742e-45■■■■■ 66.1
CSTF2P33240 CPNE1-207ENST00000414664 1070 ntTSL 524.69■■□□□ 1.542e-45■■■■■ 66.1
CSTF2P33240 CPNE1-212ENST00000430570 1332 ntTSL 524.3■■□□□ 1.482e-45■■■■■ 66.1
CSTF2P33240 CPNE1-216ENST00000437340 1755 ntTSL 1 (best)23.78■■□□□ 1.42e-45■■■■■ 66.1
CSTF2P33240 CPNE1-205ENST00000401607 1795 ntTSL 523.74■■□□□ 1.392e-45■■■■■ 66.1
CSTF2P33240 CPNE1-217ENST00000439669 784 ntTSL 523.55■■□□□ 1.362e-45■■■■■ 66.1
CSTF2P33240 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.332e-45■■■■■ 66.1
CSTF2P33240 CPNE1-220ENST00000458038 596 ntTSL 321.45■■□□□ 1.022e-45■■■■■ 66.1
CSTF2P33240 CPNE1-211ENST00000420363 821 ntTSL 220.87■□□□□ 0.932e-45■■■■■ 66.1
CSTF2P33240 CPNE1-219ENST00000440240 746 ntTSL 520.61■□□□□ 0.892e-45■■■■■ 66.1
CSTF2P33240 CPNE1-204ENST00000397443 1928 ntAPPRIS P1 TSL 520.07■□□□□ 0.82e-45■■■■■ 66.1
CSTF2P33240 CPNE1-213ENST00000434795 831 ntTSL 317.61■□□□□ 0.412e-45■■■■■ 66.1
CSTF2P33240 CPNE1-210ENST00000416778 744 ntTSL 217.61■□□□□ 0.412e-45■■■■■ 66.1
CSTF2P33240 CPNE1-224ENST00000483359 1975 ntTSL 517.18■□□□□ 0.342e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.182e-45■■■■■ 66.1
CSTF2P33240 CPNE1-208ENST00000414711 673 ntTSL 515.96■□□□□ 0.152e-45■■■■■ 66.1
CSTF2P33240 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.022e-45■■■■■ 66.1
CSTF2P33240 CPNE1-215ENST00000437100 826 ntTSL 514.21□□□□□ -0.132e-45■■■■■ 66.1
CSTF2P33240 CPNE1-206ENST00000412056 998 ntTSL 313.5□□□□□ -0.252e-45■■■■■ 66.1
CSTF2P33240 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.32□□□□□ -0.442e-45■■■■■ 66.1
CSTF2P33240 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.512e-45■■■■■ 66.1
CSTF2P33240 CPNE1-214ENST00000435747 400 ntTSL 310.48□□□□□ -0.732e-45■■■■■ 66.1
CSTF2P33240 CPNE1-218ENST00000439806 748 ntTSL 59.78□□□□□ -0.842e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-202ENST00000441563 611 ntAPPRIS ALT2 TSL 29.77□□□□□ -0.852e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-201ENST00000454607 679 ntAPPRIS ALT2 TSL 29.77□□□□□ -0.852e-45■■■■■ 66.1
CSTF2P33240 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.942e-45■■■■■ 66.1
CSTF2P33240 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.213e-41■■■■■ 61.7
CSTF2P33240 DAPK1-206ENST00000469067 2499 ntTSL 215.75■□□□□ 0.112e-37■■■■■ 33
CSTF2P33240 DAPK1-217ENST00000496522 579 ntTSL 215.45■□□□□ 0.062e-37■■■■■ 33
CSTF2P33240 DAPK1-210ENST00000472344 548 ntTSL 514.22□□□□□ -0.132e-37■■■■■ 33
CSTF2P33240 NFIA-214ENST00000496712 603 ntTSL 34.04□□□□□ -1.764e-33■■■■■ 45.6
CSTF2P33240 CP-214ENST00000497797 606 ntTSL 24.6□□□□□ -1.677e-31■■■■■ 42.7
CSTF2P33240 ATF7IP2-209ENST00000562396 1681 nt21.55■■□□□ 1.041e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-216ENST00000569900 559 ntTSL 416.11■□□□□ 0.171e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-207ENST00000561932 538 ntTSL 415.05■□□□□ -01e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-210ENST00000562527 625 ntTSL 39.82□□□□□ -0.841e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-217ENST00000569939 564 ntTSL 48.55□□□□□ -1.041e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-208ENST00000562102 558 ntTSL 46.12□□□□□ -1.431e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-211ENST00000564797 450 ntTSL 34.7□□□□□ -1.661e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-214ENST00000566316 576 ntTSL 21.71□□□□□ -2.141e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-218ENST00000570163 559 ntTSL 22.27□□□□□ -2.051e-30■■■■□ 23
CSTF2P33240 AL355987.4-202ENST00000459985 1900 ntTSL 221.53■■□□□ 1.043e-27■■■■■ 72.5
CSTF2P33240 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.93□□□□□ -1.785e-27■□□□□ 11.2
CSTF2P33240 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.7■□□□□ 0.581e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.92□□□□□ -0.181e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)7.47□□□□□ -1.211e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.19□□□□□ -1.421e-24■■■■■ 54
CSTF2P33240 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.271e-23■■■■□ 25
CSTF2P33240 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.221e-23■■■■□ 25
CSTF2P33240 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.221e-23■■■■□ 25
CSTF2P33240 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC11.4□□□□□ -0.581e-23■■■■□ 25.9
CSTF2P33240 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.472e-23■■■■■ 62.4
CSTF2P33240 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.51e-22■■■□□ 16.2
CSTF2P33240 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.591e-22■■■□□ 16.2
CSTF2P33240 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.63■□□□□ 0.251e-22■■■■□ 22.8
CSTF2P33240 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.181e-22■■■■□ 22.8
CSTF2P33240 KDELR2-205ENST00000463747 376 ntTSL 510.6□□□□□ -0.711e-22■■■■□ 22.8
CSTF2P33240 KDELR2-202ENST00000382267 583 ntTSL 49.57□□□□□ -0.881e-22■■■■□ 22.8
CSTF2P33240 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.19□□□□□ -1.421e-22■■■■□ 22.8
CSTF2P33240 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -03e-22■■■■■ 36.7
CSTF2P33240 RPS24-209ENST00000476545 815 ntTSL 312.87□□□□□ -0.353e-22■■■■■ 36.7
CSTF2P33240 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC11.89□□□□□ -0.513e-22■■■■■ 36.7
CSTF2P33240 RPS24-206ENST00000465692 778 ntTSL 210.31□□□□□ -0.763e-22■■■■■ 36.7
CSTF2P33240 SMCHD1-213ENST00000609587 460 nt3.88□□□□□ -1.791e-21■■■■■ 58
CSTF2P33240 ATP2C1-217ENST00000509662 559 ntTSL 423.31■■□□□ 1.324e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.224e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.87□□□□□ -0.034e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.154e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.29□□□□□ -0.284e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.2□□□□□ -0.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-209ENST00000505072 556 ntTSL 412.16□□□□□ -0.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-204ENST00000428331 4795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.754e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.6□□□□□ -1.194e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.92□□□□□ -1.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.584e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.74□□□□□ -1.654e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.724e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.894e-21■■■■■ 61.4
CSTF2P33240 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.296e-21■■■■■ 32.8
CSTF2P33240 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.356e-21■■■■■ 32.8
CSTF2P33240 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.826e-21■■■■■ 32.8
CSTF2P33240 NEAT1-202ENST00000501122 22743 ntBASIC4.88□□□□□ -1.636e-21■■■□□ 14.9
CSTF2P33240 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.392e-20■■■□□ 17
CSTF2P33240 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.7□□□□□ -0.382e-20■■■□□ 17
CSTF2P33240 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.682e-20■■■□□ 17
CSTF2P33240 RPS15A-211ENST00000575669 3828 nt7.12□□□□□ -1.272e-20■■■□□ 17
CSTF2P33240 RPS15A-208ENST00000572008 797 ntTSL 57.04□□□□□ -1.282e-20■■■□□ 17
CSTF2P33240 RPS15A-212ENST00000576008 589 ntTSL 1 (best)5.19□□□□□ -1.582e-20■■■□□ 17
CSTF2P33240 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.592e-20■■■□□ 17
CSTF2P33240 RPS15A-202ENST00000562935 427 ntTSL 25.12□□□□□ -1.592e-20■■■□□ 17
CSTF2P33240 RPS15A-207ENST00000569365 481 ntTSL 34.47□□□□□ -1.692e-20■■■□□ 17
Retrieved 100 of 6,735 protein–RNA pairs in 39 ms