Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 MALAT1-216ENST00000620465 333 ntTSL 23.16□□□□□ -1.91e-323■■■□□ 16.2
CSTF2P33240 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.09□□□□□ -1.911e-323■■■□□ 14.6
CSTF2P33240 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.082e-123■■■■■ 317.5
CSTF2P33240 SRSF1-203ENST00000581497 438 ntTSL 37.73□□□□□ -1.172e-107■■■■■ 111.2
CSTF2P33240 MALAT1-202ENST00000534336 8708 ntBASIC9.08□□□□□ -0.963e-79■■■□□ 16
CSTF2P33240 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC7.23□□□□□ -1.253e-79■■■□□ 16
CSTF2P33240 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.99□□□□□ -1.453e-79■■■□□ 16
CSTF2P33240 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC10.03□□□□□ -0.81e-57■■■■■ 72.5
CSTF2P33240 SNHG3-201ENST00000413987 2201 ntTSL 1 (best)9.41□□□□□ -0.98e-46■■■■■ 44.8
CSTF2P33240 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.9■■□□□ 1.742e-45■■■■■ 66.1
CSTF2P33240 CPNE1-207ENST00000414664 1070 ntTSL 524.69■■□□□ 1.542e-45■■■■■ 66.1
CSTF2P33240 CPNE1-212ENST00000430570 1332 ntTSL 524.3■■□□□ 1.482e-45■■■■■ 66.1
CSTF2P33240 CPNE1-216ENST00000437340 1755 ntTSL 1 (best)23.78■■□□□ 1.42e-45■■■■■ 66.1
CSTF2P33240 CPNE1-205ENST00000401607 1795 ntTSL 523.74■■□□□ 1.392e-45■■■■■ 66.1
CSTF2P33240 CPNE1-217ENST00000439669 784 ntTSL 523.55■■□□□ 1.362e-45■■■■■ 66.1
CSTF2P33240 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.332e-45■■■■■ 66.1
CSTF2P33240 CPNE1-220ENST00000458038 596 ntTSL 321.45■■□□□ 1.022e-45■■■■■ 66.1
CSTF2P33240 CPNE1-211ENST00000420363 821 ntTSL 220.87■□□□□ 0.932e-45■■■■■ 66.1
CSTF2P33240 CPNE1-219ENST00000440240 746 ntTSL 520.61■□□□□ 0.892e-45■■■■■ 66.1
CSTF2P33240 CPNE1-204ENST00000397443 1928 ntAPPRIS P1 TSL 520.07■□□□□ 0.82e-45■■■■■ 66.1
CSTF2P33240 CPNE1-213ENST00000434795 831 ntTSL 317.61■□□□□ 0.412e-45■■■■■ 66.1
CSTF2P33240 CPNE1-210ENST00000416778 744 ntTSL 217.61■□□□□ 0.412e-45■■■■■ 66.1
CSTF2P33240 CPNE1-224ENST00000483359 1975 ntTSL 517.18■□□□□ 0.342e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.182e-45■■■■■ 66.1
CSTF2P33240 CPNE1-208ENST00000414711 673 ntTSL 515.96■□□□□ 0.152e-45■■■■■ 66.1
CSTF2P33240 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.022e-45■■■■■ 66.1
CSTF2P33240 CPNE1-215ENST00000437100 826 ntTSL 514.21□□□□□ -0.132e-45■■■■■ 66.1
CSTF2P33240 CPNE1-206ENST00000412056 998 ntTSL 313.5□□□□□ -0.252e-45■■■■■ 66.1
CSTF2P33240 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.32□□□□□ -0.442e-45■■■■■ 66.1
CSTF2P33240 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.512e-45■■■■■ 66.1
CSTF2P33240 CPNE1-214ENST00000435747 400 ntTSL 310.48□□□□□ -0.732e-45■■■■■ 66.1
CSTF2P33240 CPNE1-218ENST00000439806 748 ntTSL 59.78□□□□□ -0.842e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-202ENST00000441563 611 ntAPPRIS ALT2 TSL 29.77□□□□□ -0.852e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-201ENST00000454607 679 ntAPPRIS ALT2 TSL 29.77□□□□□ -0.852e-45■■■■■ 66.1
CSTF2P33240 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.942e-45■■■■■ 66.1
CSTF2P33240 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.213e-41■■■■■ 61.7
CSTF2P33240 DAPK1-206ENST00000469067 2499 ntTSL 215.75■□□□□ 0.112e-37■■■■■ 33
CSTF2P33240 DAPK1-217ENST00000496522 579 ntTSL 215.45■□□□□ 0.062e-37■■■■■ 33
CSTF2P33240 DAPK1-210ENST00000472344 548 ntTSL 514.22□□□□□ -0.132e-37■■■■■ 33
CSTF2P33240 NFIA-214ENST00000496712 603 ntTSL 34.04□□□□□ -1.764e-33■■■■■ 45.6
CSTF2P33240 CP-214ENST00000497797 606 ntTSL 24.6□□□□□ -1.677e-31■■■■■ 42.7
CSTF2P33240 ATF7IP2-209ENST00000562396 1681 nt21.55■■□□□ 1.041e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-216ENST00000569900 559 ntTSL 416.11■□□□□ 0.171e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-207ENST00000561932 538 ntTSL 415.05■□□□□ -01e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-210ENST00000562527 625 ntTSL 39.82□□□□□ -0.841e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-217ENST00000569939 564 ntTSL 48.55□□□□□ -1.041e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-208ENST00000562102 558 ntTSL 46.12□□□□□ -1.431e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-211ENST00000564797 450 ntTSL 34.7□□□□□ -1.661e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-214ENST00000566316 576 ntTSL 21.71□□□□□ -2.141e-30■■■■□ 23.6
CSTF2P33240 ATF7IP2-218ENST00000570163 559 ntTSL 22.27□□□□□ -2.051e-30■■■■□ 23
CSTF2P33240 AL355987.4-202ENST00000459985 1900 ntTSL 221.53■■□□□ 1.043e-27■■■■■ 72.5
CSTF2P33240 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.93□□□□□ -1.785e-27■□□□□ 11.2
CSTF2P33240 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.7■□□□□ 0.581e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.92□□□□□ -0.181e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)7.47□□□□□ -1.211e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.19□□□□□ -1.421e-24■■■■■ 54
CSTF2P33240 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.271e-23■■■■□ 25
CSTF2P33240 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.221e-23■■■■□ 25
CSTF2P33240 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.221e-23■■■■□ 25
CSTF2P33240 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC11.4□□□□□ -0.581e-23■■■■□ 25.9
CSTF2P33240 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.472e-23■■■■■ 62.4
CSTF2P33240 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.51e-22■■■□□ 16.2
CSTF2P33240 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.591e-22■■■□□ 16.2
CSTF2P33240 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.63■□□□□ 0.251e-22■■■■□ 22.8
CSTF2P33240 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.181e-22■■■■□ 22.8
CSTF2P33240 KDELR2-205ENST00000463747 376 ntTSL 510.6□□□□□ -0.711e-22■■■■□ 22.8
CSTF2P33240 KDELR2-202ENST00000382267 583 ntTSL 49.57□□□□□ -0.881e-22■■■■□ 22.8
CSTF2P33240 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.19□□□□□ -1.421e-22■■■■□ 22.8
CSTF2P33240 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -03e-22■■■■■ 36.7
CSTF2P33240 RPS24-209ENST00000476545 815 ntTSL 312.87□□□□□ -0.353e-22■■■■■ 36.7
CSTF2P33240 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC11.89□□□□□ -0.513e-22■■■■■ 36.7
CSTF2P33240 RPS24-206ENST00000465692 778 ntTSL 210.31□□□□□ -0.763e-22■■■■■ 36.7
CSTF2P33240 SMCHD1-213ENST00000609587 460 nt3.88□□□□□ -1.791e-21■■■■■ 58
CSTF2P33240 ATP2C1-217ENST00000509662 559 ntTSL 423.31■■□□□ 1.324e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.224e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.87□□□□□ -0.034e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.154e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.29□□□□□ -0.284e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.2□□□□□ -0.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-209ENST00000505072 556 ntTSL 412.16□□□□□ -0.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-204ENST00000428331 4795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.754e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.6□□□□□ -1.194e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.92□□□□□ -1.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.584e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.74□□□□□ -1.654e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.724e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.894e-21■■■■■ 61.4
CSTF2P33240 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.296e-21■■■■■ 32.8
CSTF2P33240 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.356e-21■■■■■ 32.8
CSTF2P33240 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.826e-21■■■■■ 32.8
CSTF2P33240 NEAT1-202ENST00000501122 22743 ntBASIC4.88□□□□□ -1.636e-21■■■□□ 14.9
CSTF2P33240 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.392e-20■■■□□ 17
CSTF2P33240 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.7□□□□□ -0.382e-20■■■□□ 17
CSTF2P33240 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.682e-20■■■□□ 17
CSTF2P33240 RPS15A-211ENST00000575669 3828 nt7.12□□□□□ -1.272e-20■■■□□ 17
CSTF2P33240 RPS15A-208ENST00000572008 797 ntTSL 57.04□□□□□ -1.282e-20■■■□□ 17
CSTF2P33240 RPS15A-212ENST00000576008 589 ntTSL 1 (best)5.19□□□□□ -1.582e-20■■■□□ 17
CSTF2P33240 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.592e-20■■■□□ 17
CSTF2P33240 RPS15A-202ENST00000562935 427 ntTSL 25.12□□□□□ -1.592e-20■■■□□ 17
CSTF2P33240 RPS15A-207ENST00000569365 481 ntTSL 34.47□□□□□ -1.692e-20■■■□□ 17
Retrieved 100 of 6,735 protein–RNA pairs in 52.7 ms