RNA–Protein interactions for RNA: ENST00000370271.7

SLF2-203, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLF2, Length 2,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-203ENST00000370271 NISCHQ9Y2I1 1504 aa19.6■□□□□ 0.73
SLF2-203ENST00000370271 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
SLF2-203ENST00000370271 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
SLF2-203ENST00000370271 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
SLF2-203ENST00000370271 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
SLF2-203ENST00000370271 MYO15BQ96JP2 1530 aa15.96■□□□□ 0.15
SLF2-203ENST00000370271 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
SLF2-203ENST00000370271 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
SLF2-203ENST00000370271 ABCC9O60706 1549 aa15.72■□□□□ 0.11
SLF2-203ENST00000370271 AEBP2Q6ZN18 517 aaPredicted RBP15.67■□□□□ 0.1
SLF2-203ENST00000370271 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.09
SLF2-203ENST00000370271 NACADO15069 1562 aa15.56■□□□□ 0.08
SLF2-203ENST00000370271 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
SLF2-203ENST00000370271 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
SLF2-203ENST00000370271 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
SLF2-203ENST00000370271 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
SLF2-203ENST00000370271 HRCP23327 699 aa15.21■□□□□ 0.03
SLF2-203ENST00000370271 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
SLF2-203ENST00000370271 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
SLF2-203ENST00000370271 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
SLF2-203ENST00000370271 EIF4G1Q04637 1599 aaKnown RBP15.04■□□□□ -0
SLF2-203ENST00000370271 WIZO95785 1651 aa15.02■□□□□ -0
SLF2-203ENST00000370271 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
SLF2-203ENST00000370271 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
SLF2-203ENST00000370271 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
SLF2-203ENST00000370271 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.01
SLF2-203ENST00000370271 TRIM41Q8WV44 630 aa14.96□□□□□ -0.02
SLF2-203ENST00000370271 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
SLF2-203ENST00000370271 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
SLF2-203ENST00000370271 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
SLF2-203ENST00000370271 ZEB1P37275 1124 aaPredicted RBP14.82□□□□□ -0.04
SLF2-203ENST00000370271 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
SLF2-203ENST00000370271 EEA1Q15075 1411 aa14.75□□□□□ -0.05
SLF2-203ENST00000370271 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
SLF2-203ENST00000370271 BICRAQ9NZM4 1560 aa14.72□□□□□ -0.05
SLF2-203ENST00000370271 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
SLF2-203ENST00000370271 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
SLF2-203ENST00000370271 ABCC8Q09428 1581 aa14.57□□□□□ -0.08
SLF2-203ENST00000370271 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
SLF2-203ENST00000370271 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.08
SLF2-203ENST00000370271 KIF21BO75037 1637 aa14.52□□□□□ -0.09
SLF2-203ENST00000370271 PPARGC1BQ86YN6 1023 aaKnown RBP14.52□□□□□ -0.09
SLF2-203ENST00000370271 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
SLF2-203ENST00000370271 GOLGA3Q08378 1498 aa14.48□□□□□ -0.09
SLF2-203ENST00000370271 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
SLF2-203ENST00000370271 PHF23Q9BUL5 403 aaPredicted RBP14.45□□□□□ -0.1
SLF2-203ENST00000370271 BAZ1BQ9UIG0 1483 aaKnown RBP14.43□□□□□ -0.1
SLF2-203ENST00000370271 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
SLF2-203ENST00000370271 SOGA1O94964 1423 aa14.41□□□□□ -0.1
SLF2-203ENST00000370271 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
SLF2-203ENST00000370271 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
SLF2-203ENST00000370271 BIVM-ERCC5R4GMW8 1640 aa14.4□□□□□ -0.1
SLF2-203ENST00000370271 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
SLF2-203ENST00000370271 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
SLF2-203ENST00000370271 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
SLF2-203ENST00000370271 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
SLF2-203ENST00000370271 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
SLF2-203ENST00000370271 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
SLF2-203ENST00000370271 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
SLF2-203ENST00000370271 VPS8Q8N3P4 1428 aa14.23□□□□□ -0.13
SLF2-203ENST00000370271 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
SLF2-203ENST00000370271 CLIP1P30622 1438 aa14.2□□□□□ -0.14
SLF2-203ENST00000370271 UBTFP17480 764 aaKnown RBP14.18□□□□□ -0.14
SLF2-203ENST00000370271 PRXQ9BXM0 1461 aa14.17□□□□□ -0.14
SLF2-203ENST00000370271 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
SLF2-203ENST00000370271 CFTRP13569 1480 aa14.15□□□□□ -0.14
SLF2-203ENST00000370271 RAPGEF2Q9Y4G8 1499 aa14.13□□□□□ -0.15
SLF2-203ENST00000370271 CUX1P39880 1505 aa14.1□□□□□ -0.15
SLF2-203ENST00000370271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
SLF2-203ENST00000370271 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
SLF2-203ENST00000370271 CLSPNQ9HAW4 1339 aa14.04□□□□□ -0.16
SLF2-203ENST00000370271 MAP3K1Q13233 1512 aa14.02□□□□□ -0.17
SLF2-203ENST00000370271 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
SLF2-203ENST00000370271 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
SLF2-203ENST00000370271 APLP2Q06481 763 aa13.98□□□□□ -0.17
SLF2-203ENST00000370271 CUX2O14529 1486 aa13.97□□□□□ -0.17
SLF2-203ENST00000370271 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
SLF2-203ENST00000370271 RRBP1Q9P2E9 1410 aaKnown RBP13.95□□□□□ -0.18
SLF2-203ENST00000370271 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
SLF2-203ENST00000370271 ZNF316A6NFI3 1004 aaPredicted RBP13.92□□□□□ -0.18
SLF2-203ENST00000370271 CADPSQ9ULU8 1353 aa13.92□□□□□ -0.18
SLF2-203ENST00000370271 CENPBP07199 599 aaPredicted RBP13.89□□□□□ -0.19
SLF2-203ENST00000370271 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
SLF2-203ENST00000370271 ACIN1Q9UKV3 1341 aaKnown RBP13.87□□□□□ -0.19
SLF2-203ENST00000370271 DAXXQ9UER7 740 aaPredicted RBP13.87□□□□□ -0.19
SLF2-203ENST00000370271 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
SLF2-203ENST00000370271 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
SLF2-203ENST00000370271 DNMBPQ6XZF7 1577 aa13.84□□□□□ -0.19
SLF2-203ENST00000370271 CFAP43Q8NDM7 1665 aa13.84□□□□□ -0.19
SLF2-203ENST00000370271 CUL7Q14999 1698 aa13.84□□□□□ -0.19
SLF2-203ENST00000370271 TIAM1Q13009 1591 aa13.83□□□□□ -0.2
SLF2-203ENST00000370271 IGF1RP08069 1367 aa13.83□□□□□ -0.2
SLF2-203ENST00000370271 EFCAB5A4FU69 1503 aa13.82□□□□□ -0.2
SLF2-203ENST00000370271 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
SLF2-203ENST00000370271 FHAD1B1AJZ9 1412 aa13.8□□□□□ -0.2
SLF2-203ENST00000370271 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
SLF2-203ENST00000370271 DHX57Q6P158 1386 aaKnown RBP13.79□□□□□ -0.2
SLF2-203ENST00000370271 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■■■□ 25.1
SLF2-203ENST00000370271 TTBK1Q5TCY1 1321 aaPredicted RBP13.77□□□□□ -0.21
SLF2-203ENST00000370271 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms