RNA–Protein interactions for RNA: ENST00000615550.4

PRIM2-207, Transcript of DNA primase subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM2, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2-207ENST00000615550 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
PRIM2-207ENST00000615550 CCDC180Q9P1Z9 1646 aa13.86□□□□□ -0.19
PRIM2-207ENST00000615550 ABCC9O60706 1549 aa13.77□□□□□ -0.21
PRIM2-207ENST00000615550 DCAF8L2P0C7V8 631 aa13.58□□□□□ -0.24
PRIM2-207ENST00000615550 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
PRIM2-207ENST00000615550 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
PRIM2-207ENST00000615550 SHROOM4Q9ULL8 1493 aa13.08□□□□□ -0.32
PRIM2-207ENST00000615550 RB1CC1Q8TDY2 1594 aa13.04□□□□□ -0.32
PRIM2-207ENST00000615550 NACADO15069 1562 aa13.02□□□□□ -0.33
PRIM2-207ENST00000615550 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRIM2-207ENST00000615550 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
PRIM2-207ENST00000615550 HRCP23327 699 aa12.95□□□□□ -0.34
PRIM2-207ENST00000615550 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
PRIM2-207ENST00000615550 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
PRIM2-207ENST00000615550 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
PRIM2-207ENST00000615550 MYT1Q01538 1121 aa12.77□□□□□ -0.36
PRIM2-207ENST00000615550 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.36
PRIM2-207ENST00000615550 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
PRIM2-207ENST00000615550 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
PRIM2-207ENST00000615550 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
PRIM2-207ENST00000615550 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
PRIM2-207ENST00000615550 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.42
PRIM2-207ENST00000615550 MROH2BQ7Z745 1585 aa12.37□□□□□ -0.43
PRIM2-207ENST00000615550 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
PRIM2-207ENST00000615550 CC2D2AQ9P2K1 1620 aa12.34□□□□□ -0.43
PRIM2-207ENST00000615550 SCAF1Q9H7N4 1312 aaKnown RBP12.31□□□□□ -0.44
PRIM2-207ENST00000615550 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
PRIM2-207ENST00000615550 WIZO95785 1651 aa12.27□□□□□ -0.44
PRIM2-207ENST00000615550 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
PRIM2-207ENST00000615550 ZEB1P37275 1124 aaPredicted RBP12.25□□□□□ -0.45
PRIM2-207ENST00000615550 BAZ1AQ9NRL2 1556 aaPredicted RBP12.24□□□□□ -0.45
PRIM2-207ENST00000615550 ATAD2BQ9ULI0 1458 aa12.19□□□□□ -0.46
PRIM2-207ENST00000615550 CHIC1Q5VXU3 224 aa12.15□□□□□ -0.46
PRIM2-207ENST00000615550 TRIM26Q12899 539 aaPredicted RBP12.14□□□□□ -0.47
PRIM2-207ENST00000615550 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
PRIM2-207ENST00000615550 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
PRIM2-207ENST00000615550 SMARCA2P51531 1590 aa12.07□□□□□ -0.48
PRIM2-207ENST00000615550 NCAPD3P42695 1498 aa12.07□□□□□ -0.48
PRIM2-207ENST00000615550 PEG3Q9GZU2 1588 aa12.04□□□□□ -0.48
PRIM2-207ENST00000615550 ACIN1Q9UKV3 1341 aaKnown RBP12.03□□□□□ -0.48
PRIM2-207ENST00000615550 NESP48681 1621 aa12□□□□□ -0.49
PRIM2-207ENST00000615550 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
PRIM2-207ENST00000615550 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
PRIM2-207ENST00000615550 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.5
PRIM2-207ENST00000615550 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
PRIM2-207ENST00000615550 GTF3C3Q9Y5Q9 886 aa11.89□□□□□ -0.51
PRIM2-207ENST00000615550 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
PRIM2-207ENST00000615550 LOC105371045A0A1W2PR82 267 aa11.8□□□□□ -0.52
PRIM2-207ENST00000615550 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
PRIM2-207ENST00000615550 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
PRIM2-207ENST00000615550 ERCC6Q03468 1493 aa11.75□□□□□ -0.53
PRIM2-207ENST00000615550 CFTRP13569 1480 aa11.74□□□□□ -0.53
PRIM2-207ENST00000615550 ABCC8Q09428 1581 aa11.71□□□□□ -0.53
PRIM2-207ENST00000615550 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
PRIM2-207ENST00000615550 LAMC3Q9Y6N6 1575 aa11.69□□□□□ -0.54
PRIM2-207ENST00000615550 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
PRIM2-207ENST00000615550 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
PRIM2-207ENST00000615550 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
PRIM2-207ENST00000615550 URB2Q14146 1524 aaKnown RBP11.62□□□□□ -0.55
PRIM2-207ENST00000615550 BCL11AQ9H165 835 aa11.61□□□□□ -0.55
PRIM2-207ENST00000615550 THOC2Q8NI27 1593 aaKnown RBP11.58□□□□□ -0.56
PRIM2-207ENST00000615550 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
PRIM2-207ENST00000615550 CUX1P39880 1505 aa11.56□□□□□ -0.56
PRIM2-207ENST00000615550 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
PRIM2-207ENST00000615550 CCER1Q8TC90 406 aaPredicted RBP11.55□□□□□ -0.56
PRIM2-207ENST00000615550 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
PRIM2-207ENST00000615550 RAD54L2Q9Y4B4 1467 aa11.53□□□□□ -0.56
PRIM2-207ENST00000615550 TOPBP1Q92547 1522 aa11.53□□□□□ -0.56
PRIM2-207ENST00000615550 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.57
PRIM2-207ENST00000615550 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.57
PRIM2-207ENST00000615550 ANP32EQ9BTT0 268 aa11.52□□□□□ -0.57
PRIM2-207ENST00000615550 CLSPNQ9HAW4 1339 aa11.5□□□□□ -0.57
PRIM2-207ENST00000615550 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
PRIM2-207ENST00000615550 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
PRIM2-207ENST00000615550 FGD5Q6ZNL6 1462 aa11.49□□□□□ -0.57
PRIM2-207ENST00000615550 WDR62O43379 1518 aa11.48□□□□□ -0.57
PRIM2-207ENST00000615550 ZNF608Q9ULD9 1512 aaPredicted RBP11.48□□□□□ -0.57
PRIM2-207ENST00000615550 CUX2O14529 1486 aa11.48□□□□□ -0.57
PRIM2-207ENST00000615550 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
PRIM2-207ENST00000615550 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
PRIM2-207ENST00000615550 DNMBPQ6XZF7 1577 aa11.46□□□□□ -0.58
PRIM2-207ENST00000615550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.45□□□□□ -0.58
PRIM2-207ENST00000615550 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
PRIM2-207ENST00000615550 RUSC2Q8N2Y8 1516 aa11.43□□□□□ -0.58
PRIM2-207ENST00000615550 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
PRIM2-207ENST00000615550 SOGA1O94964 1423 aa11.42□□□□□ -0.58
PRIM2-207ENST00000615550 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
PRIM2-207ENST00000615550 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
PRIM2-207ENST00000615550 BIVM-ERCC5R4GMW8 1640 aa11.38□□□□□ -0.59
PRIM2-207ENST00000615550 TARBP1Q13395 1621 aaKnown RBP11.37□□□□□ -0.59
PRIM2-207ENST00000615550 FBLN2P98095 1184 aa11.36□□□□□ -0.59
PRIM2-207ENST00000615550 ERICH6Q7L0X2 663 aa11.33□□□□□ -0.6
PRIM2-207ENST00000615550 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
PRIM2-207ENST00000615550 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
PRIM2-207ENST00000615550 PRKCSHP14314 528 aaPredicted RBP11.3□□□□□ -0.6
PRIM2-207ENST00000615550 CSRNP3Q8WYN3 585 aa11.29□□□□□ -0.6
PRIM2-207ENST00000615550 WDR97A6NE52 1622 aa11.28□□□□□ -0.6
PRIM2-207ENST00000615550 MIER1Q8N108 512 aa11.28□□□□□ -0.6
PRIM2-207ENST00000615550 SUPT16HQ9Y5B9 1047 aaKnown RBP11.28□□□□□ -0.6
PRIM2-207ENST00000615550 TSHZ2Q9NRE2 1034 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms