RNA–Protein interactions for RNA: ENST00000358301.7

PAK4-202, Transcript of p21 (RAC1) activated kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAK4, Length 2,739 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK4-202ENST00000358301 NISCHQ9Y2I1 1504 aa34.1■■■■□ 3.05
PAK4-202ENST00000358301 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
PAK4-202ENST00000358301 SUPT5HO00267 1087 aaKnown RBP29.66■■■□□ 2.34
PAK4-202ENST00000358301 MYO15BQ96JP2 1530 aa28.95■■■□□ 2.23
PAK4-202ENST00000358301 CCDC180Q9P1Z9 1646 aa28.95■■■□□ 2.22
PAK4-202ENST00000358301 ZCCHC6Q5VYS8 1495 aaKnown RBP28.88■■■□□ 2.21
PAK4-202ENST00000358301 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
PAK4-202ENST00000358301 HRCP23327 699 aa28.78■■■□□ 2.2
PAK4-202ENST00000358301 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
PAK4-202ENST00000358301 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
PAK4-202ENST00000358301 PPARGC1BQ86YN6 1023 aaKnown RBP28.49■■■□□ 2.15
PAK4-202ENST00000358301 LOC105371045A0A1W2PR82 267 aa28.28■■■□□ 2.12
PAK4-202ENST00000358301 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
PAK4-202ENST00000358301 TRIM26Q12899 539 aaPredicted RBP27.71■■■□□ 2.03
PAK4-202ENST00000358301 FAM9AQ8IZU1 332 aaPredicted RBP27.5■■□□□ 1.99
PAK4-202ENST00000358301 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
PAK4-202ENST00000358301 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
PAK4-202ENST00000358301 ABCC9O60706 1549 aa27.32■■□□□ 1.96
PAK4-202ENST00000358301 RSF1Q96T23 1441 aaPredicted RBP27.3■■□□□ 1.96
PAK4-202ENST00000358301 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
PAK4-202ENST00000358301 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
PAK4-202ENST00000358301 ZEB1P37275 1124 aaPredicted RBP27.13■■□□□ 1.93
PAK4-202ENST00000358301 SCAF1Q9H7N4 1312 aaKnown RBP27■■□□□ 1.91
PAK4-202ENST00000358301 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
PAK4-202ENST00000358301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.8■■□□□ 1.88
PAK4-202ENST00000358301 NACADO15069 1562 aa26.78■■□□□ 1.88
PAK4-202ENST00000358301 TTBK1Q5TCY1 1321 aaPredicted RBP26.69■■□□□ 1.86
PAK4-202ENST00000358301 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
PAK4-202ENST00000358301 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
PAK4-202ENST00000358301 PELP1Q8IZL8 1130 aaKnown RBP26.56■■□□□ 1.84
PAK4-202ENST00000358301 WIZO95785 1651 aa26.56■■□□□ 1.84
PAK4-202ENST00000358301 NEUROD1Q13562 356 aa26.49■■□□□ 1.83
PAK4-202ENST00000358301 ACIN1Q9UKV3 1341 aaKnown RBP26.42■■□□□ 1.82
PAK4-202ENST00000358301 DIEXFQ68CQ4 756 aaKnown RBP26.34■■□□□ 1.81
PAK4-202ENST00000358301 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
PAK4-202ENST00000358301 GTF3C3Q9Y5Q9 886 aa26.26■■□□□ 1.79
PAK4-202ENST00000358301 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
PAK4-202ENST00000358301 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
PAK4-202ENST00000358301 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
PAK4-202ENST00000358301 SOGA1O94964 1423 aa26.15■■□□□ 1.78
PAK4-202ENST00000358301 CEP162Q5TB80 1403 aa26.15■■□□□ 1.78
PAK4-202ENST00000358301 CENPBP07199 599 aaPredicted RBP26.08■■□□□ 1.77
PAK4-202ENST00000358301 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
PAK4-202ENST00000358301 RUSC2Q8N2Y8 1516 aa26.05■■□□□ 1.76
PAK4-202ENST00000358301 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
PAK4-202ENST00000358301 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
PAK4-202ENST00000358301 YTHDC1Q96MU7 727 aaKnown RBP26.03■■□□□ 1.76
PAK4-202ENST00000358301 SMARCA4P51532 1647 aa25.98■■□□□ 1.75
PAK4-202ENST00000358301 CSRNP3Q8WYN3 585 aa25.96■■□□□ 1.75
PAK4-202ENST00000358301 TNIKQ9UKE5 1360 aa25.95■■□□□ 1.74
PAK4-202ENST00000358301 TOP2AP11388 1531 aaKnown RBP25.95■■□□□ 1.74
PAK4-202ENST00000358301 ZNF316A6NFI3 1004 aaPredicted RBP25.94■■□□□ 1.74
PAK4-202ENST00000358301 HNRNPUL2Q1KMD3 747 aaKnown RBP25.92■■□□□ 1.74
PAK4-202ENST00000358301 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
PAK4-202ENST00000358301 PABPN1Q86U42 306 aaKnown RBP eCLIP25.84■■□□□ 1.73
PAK4-202ENST00000358301 MIER1Q8N108 512 aa25.81■■□□□ 1.72
PAK4-202ENST00000358301 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
PAK4-202ENST00000358301 GOLGA3Q08378 1498 aa25.7■■□□□ 1.71
PAK4-202ENST00000358301 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.7
PAK4-202ENST00000358301 EEA1Q15075 1411 aa25.66■■□□□ 1.7
PAK4-202ENST00000358301 CLIP1P30622 1438 aa25.55■■□□□ 1.68
PAK4-202ENST00000358301 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
PAK4-202ENST00000358301 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
PAK4-202ENST00000358301 APLP2Q06481 763 aa25.47■■□□□ 1.67
PAK4-202ENST00000358301 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
PAK4-202ENST00000358301 RAPGEF2Q9Y4G8 1499 aa25.42■■□□□ 1.66
PAK4-202ENST00000358301 VPS8Q8N3P4 1428 aa25.41■■□□□ 1.66
PAK4-202ENST00000358301 KIF21BO75037 1637 aa25.33■■□□□ 1.65
PAK4-202ENST00000358301 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
PAK4-202ENST00000358301 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
PAK4-202ENST00000358301 KANK4Q5T7N3 995 aaPredicted RBP25.23■■□□□ 1.63
PAK4-202ENST00000358301 MYT1Q01538 1121 aa25.21■■□□□ 1.63
PAK4-202ENST00000358301 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
PAK4-202ENST00000358301 ITGAEP38570 1179 aa25.12■■□□□ 1.61
PAK4-202ENST00000358301 SUPT16HQ9Y5B9 1047 aaKnown RBP25.1■■□□□ 1.61
PAK4-202ENST00000358301 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
PAK4-202ENST00000358301 KCNH8Q96L42 1107 aa25.03■■□□□ 1.6
PAK4-202ENST00000358301 CLSPNQ9HAW4 1339 aa24.97■■□□□ 1.59
PAK4-202ENST00000358301 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
PAK4-202ENST00000358301 PRXQ9BXM0 1461 aa24.93■■□□□ 1.58
PAK4-202ENST00000358301 RRBP1Q9P2E9 1410 aaKnown RBP24.85■■□□□ 1.57
PAK4-202ENST00000358301 TSHZ2Q9NRE2 1034 aa24.85■■□□□ 1.57
PAK4-202ENST00000358301 BCANQ96GW7 911 aa24.84■■□□□ 1.57
PAK4-202ENST00000358301 CCNB3Q8WWL7 1395 aa24.83■■□□□ 1.57
PAK4-202ENST00000358301 ERICH3Q5RHP9 1530 aa24.82■■□□□ 1.56
PAK4-202ENST00000358301 BIVM-ERCC5R4GMW8 1640 aa24.81■■□□□ 1.56
PAK4-202ENST00000358301 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
PAK4-202ENST00000358301 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
PAK4-202ENST00000358301 CUX1P39880 1505 aa24.76■■□□□ 1.55
PAK4-202ENST00000358301 RAB3GAP2Q9H2M9 1393 aa24.76■■□□□ 1.55
PAK4-202ENST00000358301 ARHGAP35Q9NRY4 1499 aa24.76■■□□□ 1.55
PAK4-202ENST00000358301 SIN3AQ96ST3 1273 aa24.74■■□□□ 1.55
PAK4-202ENST00000358301 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
PAK4-202ENST00000358301 HIRIP3Q9BW71 556 aaPredicted RBP24.72■■□□□ 1.55
PAK4-202ENST00000358301 KIF27Q86VH2 1401 aa24.71■■□□□ 1.55
PAK4-202ENST00000358301 CUX2O14529 1486 aa24.68■■□□□ 1.54
PAK4-202ENST00000358301 MAPKBP1O60336 1514 aa24.67■■□□□ 1.54
PAK4-202ENST00000358301 FAM50AQ14320 339 aaKnown RBP24.64■■□□□ 1.53
PAK4-202ENST00000358301 FKBP8Q14318 412 aa24.63■■□□□ 1.53
PAK4-202ENST00000358301 CFTRP13569 1480 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms