RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 NISCHQ9Y2I1 1504 aa39.73■■■■□ 3.95
SMAD7-201ENST00000262158 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
SMAD7-201ENST00000262158 SUPT5HO00267 1087 aaKnown RBP33.95■■■■□ 3.03
SMAD7-201ENST00000262158 DCAF8L2P0C7V8 631 aa33.84■■■■□ 3.01
SMAD7-201ENST00000262158 ZCCHC6Q5VYS8 1495 aaKnown RBP33.54■■■□□ 2.96
SMAD7-201ENST00000262158 CCDC180Q9P1Z9 1646 aa33.4■■■□□ 2.94
SMAD7-201ENST00000262158 CHIC1Q5VXU3 224 aa32.66■■■□□ 2.82
SMAD7-201ENST00000262158 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
SMAD7-201ENST00000262158 DCAF1Q9Y4B6 1507 aa32.17■■■□□ 2.74
SMAD7-201ENST00000262158 LOC105371045A0A1W2PR82 267 aa32.06■■■□□ 2.72
SMAD7-201ENST00000262158 SCRIBQ14160 1630 aa31.96■■■□□ 2.71
SMAD7-201ENST00000262158 PCGF6Q9BYE7 350 aa31.91■■■□□ 2.7
SMAD7-201ENST00000262158 ABCC9O60706 1549 aa31.77■■■□□ 2.68
SMAD7-201ENST00000262158 EHMT2Q96KQ7 1210 aa31.61■■■□□ 2.65
SMAD7-201ENST00000262158 RSF1Q96T23 1441 aaPredicted RBP31.6■■■□□ 2.65
SMAD7-201ENST00000262158 HRCP23327 699 aa31.55■■■□□ 2.64
SMAD7-201ENST00000262158 FAM9AQ8IZU1 332 aaPredicted RBP31.52■■■□□ 2.64
SMAD7-201ENST00000262158 PPARGC1BQ86YN6 1023 aaKnown RBP31.46■■■□□ 2.63
SMAD7-201ENST00000262158 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
SMAD7-201ENST00000262158 CECR2Q9BXF3 1484 aa31.35■■■□□ 2.61
SMAD7-201ENST00000262158 TRIM41Q8WV44 630 aa31.33■■■□□ 2.61
SMAD7-201ENST00000262158 MROH2BQ7Z745 1585 aa31.11■■■□□ 2.57
SMAD7-201ENST00000262158 NACADO15069 1562 aa31.01■■■□□ 2.55
SMAD7-201ENST00000262158 WIZO95785 1651 aa30.96■■■□□ 2.55
SMAD7-201ENST00000262158 TRIM26Q12899 539 aaPredicted RBP30.89■■■□□ 2.54
SMAD7-201ENST00000262158 PABPN1Q86U42 306 aaKnown RBP eCLIP30.64■■■□□ 2.5
SMAD7-201ENST00000262158 TTBK1Q5TCY1 1321 aaPredicted RBP30.49■■■□□ 2.47
SMAD7-201ENST00000262158 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
SMAD7-201ENST00000262158 ABCC8Q09428 1581 aa30.42■■■□□ 2.46
SMAD7-201ENST00000262158 UNC13AQ9UPW8 1703 aa30.32■■■□□ 2.44
SMAD7-201ENST00000262158 CCDC88BA6NC98 1476 aa30.3■■■□□ 2.44
SMAD7-201ENST00000262158 SMARCA4P51532 1647 aa30.26■■■□□ 2.43
SMAD7-201ENST00000262158 EIF4G1Q04637 1599 aaKnown RBP30.22■■■□□ 2.43
SMAD7-201ENST00000262158 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
SMAD7-201ENST00000262158 SOGA1O94964 1423 aa30.13■■■□□ 2.41
SMAD7-201ENST00000262158 SMARCA2P51531 1590 aa30.13■■■□□ 2.41
SMAD7-201ENST00000262158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.11■■■□□ 2.41
SMAD7-201ENST00000262158 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
SMAD7-201ENST00000262158 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
SMAD7-201ENST00000262158 UBTFP17480 764 aaKnown RBP29.95■■■□□ 2.39
SMAD7-201ENST00000262158 ZEB1P37275 1124 aaPredicted RBP29.91■■■□□ 2.38
SMAD7-201ENST00000262158 RANGAP1P46060 587 aaPredicted RBP29.85■■■□□ 2.37
SMAD7-201ENST00000262158 CCER1Q8TC90 406 aaPredicted RBP29.83■■■□□ 2.37
SMAD7-201ENST00000262158 CSRNP3Q8WYN3 585 aa29.82■■■□□ 2.36
SMAD7-201ENST00000262158 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
SMAD7-201ENST00000262158 WRNQ14191 1432 aaPredicted RBP eCLIP29.66■■■□□ 2.34
SMAD7-201ENST00000262158 TNIKQ9UKE5 1360 aa29.59■■■□□ 2.33
SMAD7-201ENST00000262158 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
SMAD7-201ENST00000262158 SYNJ1O43426 1573 aa29.56■■■□□ 2.32
SMAD7-201ENST00000262158 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
SMAD7-201ENST00000262158 GOLGA3Q08378 1498 aa29.43■■■□□ 2.3
SMAD7-201ENST00000262158 HNRNPUL2Q1KMD3 747 aaKnown RBP29.43■■■□□ 2.3
SMAD7-201ENST00000262158 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
SMAD7-201ENST00000262158 EEA1Q15075 1411 aa29.36■■■□□ 2.29
SMAD7-201ENST00000262158 RAPGEF2Q9Y4G8 1499 aa29.31■■■□□ 2.28
SMAD7-201ENST00000262158 SCAF1Q9H7N4 1312 aaKnown RBP29.27■■■□□ 2.28
SMAD7-201ENST00000262158 CLIP1P30622 1438 aa29.26■■■□□ 2.27
SMAD7-201ENST00000262158 CEP164Q9UPV0 1460 aa29.23■■■□□ 2.27
SMAD7-201ENST00000262158 DIEXFQ68CQ4 756 aaKnown RBP29.16■■■□□ 2.26
SMAD7-201ENST00000262158 APLP2Q06481 763 aa29.08■■■□□ 2.25
SMAD7-201ENST00000262158 KIF21BO75037 1637 aa29.06■■■□□ 2.24
SMAD7-201ENST00000262158 VPS8Q8N3P4 1428 aa29■■■□□ 2.23
SMAD7-201ENST00000262158 NEUROD1Q13562 356 aa29■■■□□ 2.23
SMAD7-201ENST00000262158 TOP2BQ02880 1626 aa28.97■■■□□ 2.23
SMAD7-201ENST00000262158 KANK4Q5T7N3 995 aaPredicted RBP28.93■■■□□ 2.22
SMAD7-201ENST00000262158 CUX1P39880 1505 aa28.9■■■□□ 2.22
SMAD7-201ENST00000262158 YTHDC1Q96MU7 727 aaKnown RBP28.87■■■□□ 2.21
SMAD7-201ENST00000262158 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
SMAD7-201ENST00000262158 ZNF316A6NFI3 1004 aaPredicted RBP28.83■■■□□ 2.21
SMAD7-201ENST00000262158 ACIN1Q9UKV3 1341 aaKnown RBP28.81■■■□□ 2.2
SMAD7-201ENST00000262158 ITGAEP38570 1179 aa28.8■■■□□ 2.2
SMAD7-201ENST00000262158 BIVM-ERCC5R4GMW8 1640 aa28.78■■■□□ 2.2
SMAD7-201ENST00000262158 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
SMAD7-201ENST00000262158 PRXQ9BXM0 1461 aa28.76■■■□□ 2.19
SMAD7-201ENST00000262158 HMGXB3Q12766 1538 aa28.7■■■□□ 2.18
SMAD7-201ENST00000262158 GTF3C3Q9Y5Q9 886 aa28.68■■■□□ 2.18
SMAD7-201ENST00000262158 KIF27Q86VH2 1401 aa28.67■■■□□ 2.18
SMAD7-201ENST00000262158 CFTRP13569 1480 aa28.67■■■□□ 2.18
SMAD7-201ENST00000262158 MIER1Q8N108 512 aa28.66■■■□□ 2.18
SMAD7-201ENST00000262158 P3H3Q8IVL6 736 aa28.64■■■□□ 2.18
SMAD7-201ENST00000262158 CUX2O14529 1486 aa28.58■■■□□ 2.17
SMAD7-201ENST00000262158 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
SMAD7-201ENST00000262158 ATP1B4Q9UN42 357 aaPredicted RBP28.55■■■□□ 2.16
SMAD7-201ENST00000262158 ARHGAP35Q9NRY4 1499 aa28.52■■■□□ 2.16
SMAD7-201ENST00000262158 CENPBP07199 599 aaPredicted RBP28.5■■■□□ 2.15
SMAD7-201ENST00000262158 IGF1RP08069 1367 aa28.49■■■□□ 2.15
SMAD7-201ENST00000262158 PELP1Q8IZL8 1130 aaKnown RBP28.47■■■□□ 2.15
SMAD7-201ENST00000262158 DHX57Q6P158 1386 aaKnown RBP28.46■■■□□ 2.15
SMAD7-201ENST00000262158 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
SMAD7-201ENST00000262158 FGD5Q6ZNL6 1462 aa28.42■■■□□ 2.14
SMAD7-201ENST00000262158 CARMIL1Q5VZK9 1371 aa28.37■■■□□ 2.13
SMAD7-201ENST00000262158 NESP48681 1621 aa28.33■■■□□ 2.13
SMAD7-201ENST00000262158 CC2D2AQ9P2K1 1620 aa28.33■■■□□ 2.13
SMAD7-201ENST00000262158 RAD54L2Q9Y4B4 1467 aa28.33■■■□□ 2.13
SMAD7-201ENST00000262158 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
SMAD7-201ENST00000262158 CCNB3Q8WWL7 1395 aa28.3■■■□□ 2.12
SMAD7-201ENST00000262158 FAM50AQ14320 339 aaKnown RBP28.28■■■□□ 2.12
SMAD7-201ENST00000262158 RRBP1Q9P2E9 1410 aaKnown RBP28.25■■■□□ 2.11
SMAD7-201ENST00000262158 FANCD2Q9BXW9 1451 aa28.23■■■□□ 2.11
SMAD7-201ENST00000262158 FHOD3Q2V2M9 1422 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms