RNA–Protein interactions for RNA: ENST00000555996.5

LINC01146-203, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 2 BASIC

Gene LINC01146, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-203ENST00000555996 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
LINC01146-203ENST00000555996 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
LINC01146-203ENST00000555996 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
LINC01146-203ENST00000555996 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
LINC01146-203ENST00000555996 FOXD1Q16676 465 aa19.02■□□□□ 0.64
LINC01146-203ENST00000555996 NISCHQ9Y2I1 1504 aa18.34■□□□□ 0.53
LINC01146-203ENST00000555996 MSH5O43196 834 aa17.86■□□□□ 0.45
LINC01146-203ENST00000555996 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
LINC01146-203ENST00000555996 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
LINC01146-203ENST00000555996 PIAS4Q8N2W9 510 aaPredicted RBP17.7■□□□□ 0.42
LINC01146-203ENST00000555996 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
LINC01146-203ENST00000555996 ADRA2BP18089 450 aa17.55■□□□□ 0.4
LINC01146-203ENST00000555996 ABCC9O60706 1549 aa16.82■□□□□ 0.28
LINC01146-203ENST00000555996 CCDC180Q9P1Z9 1646 aa16.39■□□□□ 0.21
LINC01146-203ENST00000555996 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
LINC01146-203ENST00000555996 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
LINC01146-203ENST00000555996 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
LINC01146-203ENST00000555996 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
LINC01146-203ENST00000555996 DCAF8L2P0C7V8 631 aa15.82■□□□□ 0.12
LINC01146-203ENST00000555996 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
LINC01146-203ENST00000555996 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC01146-203ENST00000555996 NACADO15069 1562 aa15.64■□□□□ 0.09
LINC01146-203ENST00000555996 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
LINC01146-203ENST00000555996 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
LINC01146-203ENST00000555996 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
LINC01146-203ENST00000555996 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
LINC01146-203ENST00000555996 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
LINC01146-203ENST00000555996 BICRAQ9NZM4 1560 aa15.35■□□□□ 0.05
LINC01146-203ENST00000555996 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.04
LINC01146-203ENST00000555996 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
LINC01146-203ENST00000555996 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
LINC01146-203ENST00000555996 RNF39Q9H2S5 420 aa15.24■□□□□ 0.03
LINC01146-203ENST00000555996 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
LINC01146-203ENST00000555996 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
LINC01146-203ENST00000555996 CC2D2AQ9P2K1 1620 aa15.1■□□□□ 0.01
LINC01146-203ENST00000555996 SCRIBQ14160 1630 aa15.07■□□□□ 0
LINC01146-203ENST00000555996 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
LINC01146-203ENST00000555996 SHROOM4Q9ULL8 1493 aa15.04■□□□□ -0
LINC01146-203ENST00000555996 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
LINC01146-203ENST00000555996 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
LINC01146-203ENST00000555996 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
LINC01146-203ENST00000555996 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
LINC01146-203ENST00000555996 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
LINC01146-203ENST00000555996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.06
LINC01146-203ENST00000555996 ERCC6Q03468 1493 aa14.51□□□□□ -0.09
LINC01146-203ENST00000555996 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
LINC01146-203ENST00000555996 CUX2O14529 1486 aa14.48□□□□□ -0.09
LINC01146-203ENST00000555996 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
LINC01146-203ENST00000555996 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
LINC01146-203ENST00000555996 NESP48681 1621 aa14.39□□□□□ -0.11
LINC01146-203ENST00000555996 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
LINC01146-203ENST00000555996 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
LINC01146-203ENST00000555996 KCNA4P22459 653 aa14.29□□□□□ -0.12
LINC01146-203ENST00000555996 HMGXB3Q12766 1538 aa14.29□□□□□ -0.12
LINC01146-203ENST00000555996 BAZ1BQ9UIG0 1483 aaKnown RBP14.28□□□□□ -0.12
LINC01146-203ENST00000555996 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
LINC01146-203ENST00000555996 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
LINC01146-203ENST00000555996 CAPN15O75808 1086 aa14.2□□□□□ -0.14
LINC01146-203ENST00000555996 DSG3P32926 999 aa14.2□□□□□ -0.14
LINC01146-203ENST00000555996 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
LINC01146-203ENST00000555996 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
LINC01146-203ENST00000555996 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
LINC01146-203ENST00000555996 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
LINC01146-203ENST00000555996 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
LINC01146-203ENST00000555996 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
LINC01146-203ENST00000555996 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
LINC01146-203ENST00000555996 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
LINC01146-203ENST00000555996 KIF21AQ7Z4S6 1674 aa14.05□□□□□ -0.16
LINC01146-203ENST00000555996 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
LINC01146-203ENST00000555996 APLP2Q06481 763 aa13.95□□□□□ -0.18
LINC01146-203ENST00000555996 WIZO95785 1651 aa13.95□□□□□ -0.18
LINC01146-203ENST00000555996 WDR62O43379 1518 aa13.94□□□□□ -0.18
LINC01146-203ENST00000555996 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
LINC01146-203ENST00000555996 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
LINC01146-203ENST00000555996 FANCD2Q9BXW9 1451 aa13.92□□□□□ -0.18
LINC01146-203ENST00000555996 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
LINC01146-203ENST00000555996 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
LINC01146-203ENST00000555996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
LINC01146-203ENST00000555996 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
LINC01146-203ENST00000555996 POTEHQ6S545 545 aa13.88□□□□□ -0.19
LINC01146-203ENST00000555996 ABCB7O75027 752 aa13.86□□□□□ -0.19
LINC01146-203ENST00000555996 CFTRP13569 1480 aa13.85□□□□□ -0.19
LINC01146-203ENST00000555996 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
LINC01146-203ENST00000555996 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
LINC01146-203ENST00000555996 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
LINC01146-203ENST00000555996 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
LINC01146-203ENST00000555996 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
LINC01146-203ENST00000555996 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
LINC01146-203ENST00000555996 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
LINC01146-203ENST00000555996 IFT140Q96RY7 1462 aa13.66□□□□□ -0.22
LINC01146-203ENST00000555996 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
LINC01146-203ENST00000555996 RIMBP3CA6NJZ7 1639 aa13.63□□□□□ -0.23
LINC01146-203ENST00000555996 RIMBP3BA6NNM3 1639 aa13.63□□□□□ -0.23
LINC01146-203ENST00000555996 RIMBP3Q9UFD9 1639 aa13.63□□□□□ -0.23
LINC01146-203ENST00000555996 FBLN2P98095 1184 aa13.62□□□□□ -0.23
LINC01146-203ENST00000555996 TOPBP1Q92547 1522 aa13.61□□□□□ -0.23
LINC01146-203ENST00000555996 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
LINC01146-203ENST00000555996 AQRO60306 1485 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC01146-203ENST00000555996 ABCC8Q09428 1581 aa13.54□□□□□ -0.24
LINC01146-203ENST00000555996 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms