RNA–Protein interactions for RNA: ENST00000339708.9

PDE8A-202, Transcript of phosphodiesterase 8A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8A, Length 2,663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-202ENST00000339708 NISCHQ9Y2I1 1504 aa38.78■■■■□ 3.8
PDE8A-202ENST00000339708 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
PDE8A-202ENST00000339708 CCDC180Q9P1Z9 1646 aa32.82■■■□□ 2.84
PDE8A-202ENST00000339708 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
PDE8A-202ENST00000339708 SUPT5HO00267 1087 aaKnown RBP32.68■■■□□ 2.82
PDE8A-202ENST00000339708 DCAF8L2P0C7V8 631 aa32.6■■■□□ 2.81
PDE8A-202ENST00000339708 DCAF1Q9Y4B6 1507 aa31.64■■■□□ 2.66
PDE8A-202ENST00000339708 CHIC1Q5VXU3 224 aa31.6■■■□□ 2.65
PDE8A-202ENST00000339708 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
PDE8A-202ENST00000339708 SCRIBQ14160 1630 aa31.03■■■□□ 2.56
PDE8A-202ENST00000339708 ABCC9O60706 1549 aa30.86■■■□□ 2.53
PDE8A-202ENST00000339708 LOC105371045A0A1W2PR82 267 aa30.81■■■□□ 2.52
PDE8A-202ENST00000339708 RSF1Q96T23 1441 aaPredicted RBP30.74■■■□□ 2.51
PDE8A-202ENST00000339708 PCGF6Q9BYE7 350 aa30.65■■■□□ 2.5
PDE8A-202ENST00000339708 HRCP23327 699 aa30.45■■■□□ 2.47
PDE8A-202ENST00000339708 NACADO15069 1562 aa30.44■■■□□ 2.46
PDE8A-202ENST00000339708 CECR2Q9BXF3 1484 aa30.4■■■□□ 2.46
PDE8A-202ENST00000339708 RB1CC1Q8TDY2 1594 aa30.4■■■□□ 2.46
PDE8A-202ENST00000339708 TRIM41Q8WV44 630 aa30.34■■■□□ 2.45
PDE8A-202ENST00000339708 FAM9AQ8IZU1 332 aaPredicted RBP30.26■■■□□ 2.43
PDE8A-202ENST00000339708 MROH2BQ7Z745 1585 aa30.23■■■□□ 2.43
PDE8A-202ENST00000339708 EHMT2Q96KQ7 1210 aa30.14■■■□□ 2.42
PDE8A-202ENST00000339708 WIZO95785 1651 aa30.06■■■□□ 2.4
PDE8A-202ENST00000339708 PPARGC1BQ86YN6 1023 aaKnown RBP30.05■■■□□ 2.4
PDE8A-202ENST00000339708 TRIM26Q12899 539 aaPredicted RBP29.93■■■□□ 2.38
PDE8A-202ENST00000339708 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
PDE8A-202ENST00000339708 PABPN1Q86U42 306 aaKnown RBP eCLIP29.6■■■□□ 2.33
PDE8A-202ENST00000339708 UNC13AQ9UPW8 1703 aa29.56■■■□□ 2.32
PDE8A-202ENST00000339708 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
PDE8A-202ENST00000339708 TOP2AP11388 1531 aaKnown RBP29.47■■■□□ 2.31
PDE8A-202ENST00000339708 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
PDE8A-202ENST00000339708 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
PDE8A-202ENST00000339708 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
PDE8A-202ENST00000339708 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
PDE8A-202ENST00000339708 BICRAQ9NZM4 1560 aa29.24■■■□□ 2.27
PDE8A-202ENST00000339708 SOGA1O94964 1423 aa29.16■■■□□ 2.26
PDE8A-202ENST00000339708 ZEB1P37275 1124 aaPredicted RBP29.13■■■□□ 2.25
PDE8A-202ENST00000339708 TTBK1Q5TCY1 1321 aaPredicted RBP29.11■■■□□ 2.25
PDE8A-202ENST00000339708 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
PDE8A-202ENST00000339708 CSRNP3Q8WYN3 585 aa28.97■■■□□ 2.23
PDE8A-202ENST00000339708 UBTFP17480 764 aaKnown RBP28.96■■■□□ 2.23
PDE8A-202ENST00000339708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.93■■■□□ 2.22
PDE8A-202ENST00000339708 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
PDE8A-202ENST00000339708 WRNQ14191 1432 aaPredicted RBP eCLIP28.88■■■□□ 2.21
PDE8A-202ENST00000339708 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
PDE8A-202ENST00000339708 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
PDE8A-202ENST00000339708 TNIKQ9UKE5 1360 aa28.83■■■□□ 2.21
PDE8A-202ENST00000339708 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
PDE8A-202ENST00000339708 CCER1Q8TC90 406 aaPredicted RBP28.77■■■□□ 2.2
PDE8A-202ENST00000339708 EEA1Q15075 1411 aa28.77■■■□□ 2.2
PDE8A-202ENST00000339708 SYNJ1O43426 1573 aa28.72■■■□□ 2.19
PDE8A-202ENST00000339708 GOLGA3Q08378 1498 aa28.66■■■□□ 2.18
PDE8A-202ENST00000339708 RANGAP1P46060 587 aaPredicted RBP28.59■■■□□ 2.17
PDE8A-202ENST00000339708 CEP164Q9UPV0 1460 aa28.49■■■□□ 2.15
PDE8A-202ENST00000339708 RAPGEF2Q9Y4G8 1499 aa28.42■■■□□ 2.14
PDE8A-202ENST00000339708 CLIP1P30622 1438 aa28.41■■■□□ 2.14
PDE8A-202ENST00000339708 KIF21BO75037 1637 aa28.38■■■□□ 2.13
PDE8A-202ENST00000339708 HNRNPUL2Q1KMD3 747 aaKnown RBP28.32■■■□□ 2.12
PDE8A-202ENST00000339708 TOP2BQ02880 1626 aa28.28■■■□□ 2.12
PDE8A-202ENST00000339708 NCAPD3P42695 1498 aa28.24■■■□□ 2.11
PDE8A-202ENST00000339708 APLP2Q06481 763 aa28.23■■■□□ 2.11
PDE8A-202ENST00000339708 VPS8Q8N3P4 1428 aa28.22■■■□□ 2.11
PDE8A-202ENST00000339708 HMGXB3Q12766 1538 aa28.15■■■□□ 2.1
PDE8A-202ENST00000339708 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
PDE8A-202ENST00000339708 DIEXFQ68CQ4 756 aaKnown RBP28.12■■■□□ 2.09
PDE8A-202ENST00000339708 CUX1P39880 1505 aa28.12■■■□□ 2.09
PDE8A-202ENST00000339708 SCAF1Q9H7N4 1312 aaKnown RBP28.07■■■□□ 2.08
PDE8A-202ENST00000339708 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
PDE8A-202ENST00000339708 CFTRP13569 1480 aa28.02■■■□□ 2.08
PDE8A-202ENST00000339708 KIF27Q86VH2 1401 aa27.97■■■□□ 2.07
PDE8A-202ENST00000339708 KANK4Q5T7N3 995 aaPredicted RBP27.94■■■□□ 2.06
PDE8A-202ENST00000339708 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
PDE8A-202ENST00000339708 ARAP1Q96P48 1450 aa27.93■■■□□ 2.06
PDE8A-202ENST00000339708 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
PDE8A-202ENST00000339708 NEUROD1Q13562 356 aa27.85■■■□□ 2.05
PDE8A-202ENST00000339708 ACIN1Q9UKV3 1341 aaKnown RBP27.79■■■□□ 2.04
PDE8A-202ENST00000339708 CUX2O14529 1486 aa27.78■■■□□ 2.04
PDE8A-202ENST00000339708 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
PDE8A-202ENST00000339708 IGF1RP08069 1367 aa27.72■■■□□ 2.03
PDE8A-202ENST00000339708 ARHGAP35Q9NRY4 1499 aa27.71■■■□□ 2.03
PDE8A-202ENST00000339708 ITGAEP38570 1179 aa27.66■■■□□ 2.02
PDE8A-202ENST00000339708 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
PDE8A-202ENST00000339708 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
PDE8A-202ENST00000339708 CARMIL1Q5VZK9 1371 aa27.61■■■□□ 2.01
PDE8A-202ENST00000339708 YTHDC1Q96MU7 727 aaKnown RBP27.61■■■□□ 2.01
PDE8A-202ENST00000339708 CENPBP07199 599 aaPredicted RBP27.6■■■□□ 2.01
PDE8A-202ENST00000339708 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
PDE8A-202ENST00000339708 MIER1Q8N108 512 aa27.58■■■□□ 2.01
PDE8A-202ENST00000339708 P3H3Q8IVL6 736 aa27.57■■■□□ 2
PDE8A-202ENST00000339708 DHX57Q6P158 1386 aaKnown RBP27.57■■■□□ 2
PDE8A-202ENST00000339708 GTF3C3Q9Y5Q9 886 aa27.54■■■□□ 2
PDE8A-202ENST00000339708 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
PDE8A-202ENST00000339708 RRBP1Q9P2E9 1410 aaKnown RBP27.52■■■□□ 2
PDE8A-202ENST00000339708 CCNB3Q8WWL7 1395 aa27.5■■□□□ 1.99
PDE8A-202ENST00000339708 ATP1B4Q9UN42 357 aaPredicted RBP27.49■■□□□ 1.99
PDE8A-202ENST00000339708 RAD54L2Q9Y4B4 1467 aa27.47■■□□□ 1.99
PDE8A-202ENST00000339708 NESP48681 1621 aa27.46■■□□□ 1.99
PDE8A-202ENST00000339708 CLSPNQ9HAW4 1339 aa27.38■■□□□ 1.97
PDE8A-202ENST00000339708 TIAM1Q13009 1591 aa27.33■■□□□ 1.96
PDE8A-202ENST00000339708 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms