RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
SAMD4A-211ENST00000557013 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
SAMD4A-211ENST00000557013 ABCC9O60706 1549 aa14.09□□□□□ -0.15
SAMD4A-211ENST00000557013 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
SAMD4A-211ENST00000557013 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
SAMD4A-211ENST00000557013 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
SAMD4A-211ENST00000557013 MYT1Q01538 1121 aa13.62□□□□□ -0.23
SAMD4A-211ENST00000557013 HRCP23327 699 aa13.59□□□□□ -0.23
SAMD4A-211ENST00000557013 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.23
SAMD4A-211ENST00000557013 PPARGC1BQ86YN6 1023 aaKnown RBP13.54□□□□□ -0.24
SAMD4A-211ENST00000557013 RB1CC1Q8TDY2 1594 aa13.39□□□□□ -0.27
SAMD4A-211ENST00000557013 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
SAMD4A-211ENST00000557013 NACADO15069 1562 aa13.32□□□□□ -0.28
SAMD4A-211ENST00000557013 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
SAMD4A-211ENST00000557013 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
SAMD4A-211ENST00000557013 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
SAMD4A-211ENST00000557013 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
SAMD4A-211ENST00000557013 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
SAMD4A-211ENST00000557013 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
SAMD4A-211ENST00000557013 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
SAMD4A-211ENST00000557013 SCRIBQ14160 1630 aa13.08□□□□□ -0.32
SAMD4A-211ENST00000557013 BICRAQ9NZM4 1560 aa12.99□□□□□ -0.33
SAMD4A-211ENST00000557013 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
SAMD4A-211ENST00000557013 LOC105371045A0A1W2PR82 267 aa12.92□□□□□ -0.34
SAMD4A-211ENST00000557013 GTF3C3Q9Y5Q9 886 aa12.84□□□□□ -0.35
SAMD4A-211ENST00000557013 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
SAMD4A-211ENST00000557013 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
SAMD4A-211ENST00000557013 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
SAMD4A-211ENST00000557013 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
SAMD4A-211ENST00000557013 NEUROD1Q13562 356 aa12.74□□□□□ -0.37
SAMD4A-211ENST00000557013 CENPBP07199 599 aaPredicted RBP12.74□□□□□ -0.37
SAMD4A-211ENST00000557013 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
SAMD4A-211ENST00000557013 EIF4G1Q04637 1599 aaKnown RBP12.68□□□□□ -0.38
SAMD4A-211ENST00000557013 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
SAMD4A-211ENST00000557013 FAM9AQ8IZU1 332 aaPredicted RBP12.66□□□□□ -0.38
SAMD4A-211ENST00000557013 ZEB1P37275 1124 aaPredicted RBP12.62□□□□□ -0.39
SAMD4A-211ENST00000557013 CECR2Q9BXF3 1484 aa12.6□□□□□ -0.39
SAMD4A-211ENST00000557013 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
SAMD4A-211ENST00000557013 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
SAMD4A-211ENST00000557013 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
SAMD4A-211ENST00000557013 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
SAMD4A-211ENST00000557013 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
SAMD4A-211ENST00000557013 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
SAMD4A-211ENST00000557013 ANP32EQ9BTT0 268 aa12.37□□□□□ -0.43
SAMD4A-211ENST00000557013 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
SAMD4A-211ENST00000557013 RSF1Q96T23 1441 aaPredicted RBP12.36□□□□□ -0.43
SAMD4A-211ENST00000557013 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
SAMD4A-211ENST00000557013 DIEXFQ68CQ4 756 aaKnown RBP12.34□□□□□ -0.43
SAMD4A-211ENST00000557013 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
SAMD4A-211ENST00000557013 CCER1Q8TC90 406 aaPredicted RBP12.32□□□□□ -0.44
SAMD4A-211ENST00000557013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
SAMD4A-211ENST00000557013 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
SAMD4A-211ENST00000557013 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
SAMD4A-211ENST00000557013 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
SAMD4A-211ENST00000557013 WIZO95785 1651 aa12.25□□□□□ -0.45
SAMD4A-211ENST00000557013 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
SAMD4A-211ENST00000557013 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
SAMD4A-211ENST00000557013 NESP48681 1621 aa12.17□□□□□ -0.46
SAMD4A-211ENST00000557013 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
SAMD4A-211ENST00000557013 APLP2Q06481 763 aa12.05□□□□□ -0.48
SAMD4A-211ENST00000557013 TOP2AP11388 1531 aaKnown RBP12.04□□□□□ -0.48
SAMD4A-211ENST00000557013 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
SAMD4A-211ENST00000557013 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
SAMD4A-211ENST00000557013 CADPSQ9ULU8 1353 aa12□□□□□ -0.49
SAMD4A-211ENST00000557013 LAMC3Q9Y6N6 1575 aa12□□□□□ -0.49
SAMD4A-211ENST00000557013 BCANQ96GW7 911 aa11.99□□□□□ -0.49
SAMD4A-211ENST00000557013 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
SAMD4A-211ENST00000557013 UBTFP17480 764 aaKnown RBP11.98□□□□□ -0.49
SAMD4A-211ENST00000557013 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
SAMD4A-211ENST00000557013 PDS5BQ9NTI5 1447 aa11.96□□□□□ -0.5
SAMD4A-211ENST00000557013 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
SAMD4A-211ENST00000557013 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
SAMD4A-211ENST00000557013 CEP162Q5TB80 1403 aa11.93□□□□□ -0.5
SAMD4A-211ENST00000557013 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
SAMD4A-211ENST00000557013 MIER1Q8N108 512 aa11.92□□□□□ -0.5
SAMD4A-211ENST00000557013 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
SAMD4A-211ENST00000557013 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
SAMD4A-211ENST00000557013 CFTRP13569 1480 aa11.89□□□□□ -0.51
SAMD4A-211ENST00000557013 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
SAMD4A-211ENST00000557013 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
SAMD4A-211ENST00000557013 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
SAMD4A-211ENST00000557013 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
SAMD4A-211ENST00000557013 CUX2O14529 1486 aa11.87□□□□□ -0.51
SAMD4A-211ENST00000557013 SOGA1O94964 1423 aa11.86□□□□□ -0.51
SAMD4A-211ENST00000557013 TNIKQ9UKE5 1360 aa11.85□□□□□ -0.51
SAMD4A-211ENST00000557013 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
SAMD4A-211ENST00000557013 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
SAMD4A-211ENST00000557013 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
SAMD4A-211ENST00000557013 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
SAMD4A-211ENST00000557013 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 WDR62O43379 1518 aa11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 RTN4Q9NQC3 1192 aaKnown RBP11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
SAMD4A-211ENST00000557013 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
SAMD4A-211ENST00000557013 EEA1Q15075 1411 aa11.74□□□□□ -0.53
SAMD4A-211ENST00000557013 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
SAMD4A-211ENST00000557013 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
SAMD4A-211ENST00000557013 FBLN2P98095 1184 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms