RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 NISCHQ9Y2I1 1504 aa39.43■■■■□ 3.9
PDE8A-211ENST00000559742 CCDC180Q9P1Z9 1646 aa33.63■■■□□ 2.97
PDE8A-211ENST00000559742 SHROOM4Q9ULL8 1493 aa33.61■■■□□ 2.97
PDE8A-211ENST00000559742 ZCCHC6Q5VYS8 1495 aaKnown RBP33.26■■■□□ 2.91
PDE8A-211ENST00000559742 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
PDE8A-211ENST00000559742 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
PDE8A-211ENST00000559742 DCAF1Q9Y4B6 1507 aa32.22■■■□□ 2.75
PDE8A-211ENST00000559742 ABCC9O60706 1549 aa31.76■■■□□ 2.67
PDE8A-211ENST00000559742 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
PDE8A-211ENST00000559742 CHIC1Q5VXU3 224 aa31.53■■■□□ 2.64
PDE8A-211ENST00000559742 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
PDE8A-211ENST00000559742 NACADO15069 1562 aa31.2■■■□□ 2.58
PDE8A-211ENST00000559742 HRCP23327 699 aa31.13■■■□□ 2.57
PDE8A-211ENST00000559742 RSF1Q96T23 1441 aaPredicted RBP31.09■■■□□ 2.57
PDE8A-211ENST00000559742 CECR2Q9BXF3 1484 aa30.88■■■□□ 2.53
PDE8A-211ENST00000559742 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
PDE8A-211ENST00000559742 LOC105371045A0A1W2PR82 267 aa30.71■■■□□ 2.51
PDE8A-211ENST00000559742 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.51
PDE8A-211ENST00000559742 WIZO95785 1651 aa30.56■■■□□ 2.48
PDE8A-211ENST00000559742 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
PDE8A-211ENST00000559742 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
PDE8A-211ENST00000559742 PPARGC1BQ86YN6 1023 aaKnown RBP30.39■■■□□ 2.46
PDE8A-211ENST00000559742 PCGF6Q9BYE7 350 aa30.34■■■□□ 2.45
PDE8A-211ENST00000559742 FAM9AQ8IZU1 332 aaPredicted RBP30.34■■■□□ 2.45
PDE8A-211ENST00000559742 BAZ1AQ9NRL2 1556 aaPredicted RBP30.31■■■□□ 2.44
PDE8A-211ENST00000559742 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
PDE8A-211ENST00000559742 PELP1Q8IZL8 1130 aaKnown RBP30.26■■■□□ 2.44
PDE8A-211ENST00000559742 EHMT2Q96KQ7 1210 aa30.21■■■□□ 2.43
PDE8A-211ENST00000559742 SMARCA4P51532 1647 aa30.13■■■□□ 2.41
PDE8A-211ENST00000559742 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.39
PDE8A-211ENST00000559742 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
PDE8A-211ENST00000559742 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
PDE8A-211ENST00000559742 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
PDE8A-211ENST00000559742 SMARCA2P51531 1590 aa29.83■■■□□ 2.37
PDE8A-211ENST00000559742 ABCC8Q09428 1581 aa29.78■■■□□ 2.36
PDE8A-211ENST00000559742 TRIM26Q12899 539 aaPredicted RBP29.67■■■□□ 2.34
PDE8A-211ENST00000559742 SCAF1Q9H7N4 1312 aaKnown RBP29.5■■■□□ 2.31
PDE8A-211ENST00000559742 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
PDE8A-211ENST00000559742 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
PDE8A-211ENST00000559742 SOGA1O94964 1423 aa29.4■■■□□ 2.3
PDE8A-211ENST00000559742 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
PDE8A-211ENST00000559742 RUSC2Q8N2Y8 1516 aa29.29■■■□□ 2.28
PDE8A-211ENST00000559742 ZEB1P37275 1124 aaPredicted RBP29.25■■■□□ 2.27
PDE8A-211ENST00000559742 WRNQ14191 1432 aaPredicted RBP eCLIP29.24■■■□□ 2.27
PDE8A-211ENST00000559742 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
PDE8A-211ENST00000559742 MYT1Q01538 1121 aa29.13■■■□□ 2.25
PDE8A-211ENST00000559742 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
PDE8A-211ENST00000559742 UBTFP17480 764 aaKnown RBP29.12■■■□□ 2.25
PDE8A-211ENST00000559742 TTBK1Q5TCY1 1321 aaPredicted RBP29.12■■■□□ 2.25
PDE8A-211ENST00000559742 CEP162Q5TB80 1403 aa29.04■■■□□ 2.24
PDE8A-211ENST00000559742 EEA1Q15075 1411 aa29■■■□□ 2.23
PDE8A-211ENST00000559742 TNIKQ9UKE5 1360 aa28.95■■■□□ 2.22
PDE8A-211ENST00000559742 GOLGA3Q08378 1498 aa28.88■■■□□ 2.21
PDE8A-211ENST00000559742 NCAPD3P42695 1498 aa28.88■■■□□ 2.21
PDE8A-211ENST00000559742 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
PDE8A-211ENST00000559742 RANGAP1P46060 587 aaPredicted RBP28.81■■■□□ 2.2
PDE8A-211ENST00000559742 ACIN1Q9UKV3 1341 aaKnown RBP28.75■■■□□ 2.19
PDE8A-211ENST00000559742 CEP164Q9UPV0 1460 aa28.75■■■□□ 2.19
PDE8A-211ENST00000559742 TOP2BQ02880 1626 aa28.74■■■□□ 2.19
PDE8A-211ENST00000559742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.72■■■□□ 2.19
PDE8A-211ENST00000559742 RAPGEF2Q9Y4G8 1499 aa28.69■■■□□ 2.18
PDE8A-211ENST00000559742 KIF21BO75037 1637 aa28.68■■■□□ 2.18
PDE8A-211ENST00000559742 NEUROD1Q13562 356 aa28.63■■■□□ 2.17
PDE8A-211ENST00000559742 BIVM-ERCC5R4GMW8 1640 aa28.62■■■□□ 2.17
PDE8A-211ENST00000559742 CC2D2AQ9P2K1 1620 aa28.6■■■□□ 2.17
PDE8A-211ENST00000559742 CUX1P39880 1505 aa28.59■■■□□ 2.17
PDE8A-211ENST00000559742 CLIP1P30622 1438 aa28.59■■■□□ 2.17
PDE8A-211ENST00000559742 CFTRP13569 1480 aa28.58■■■□□ 2.17
PDE8A-211ENST00000559742 CCER1Q8TC90 406 aaPredicted RBP28.57■■■□□ 2.16
PDE8A-211ENST00000559742 GTF3C3Q9Y5Q9 886 aa28.48■■■□□ 2.15
PDE8A-211ENST00000559742 VPS8Q8N3P4 1428 aa28.37■■■□□ 2.13
PDE8A-211ENST00000559742 CADPSQ9ULU8 1353 aa28.36■■■□□ 2.13
PDE8A-211ENST00000559742 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
PDE8A-211ENST00000559742 CENPBP07199 599 aaPredicted RBP28.35■■■□□ 2.13
PDE8A-211ENST00000559742 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
PDE8A-211ENST00000559742 APLP2Q06481 763 aa28.34■■■□□ 2.13
PDE8A-211ENST00000559742 PRDM2Q13029 1718 aa28.32■■■□□ 2.12
PDE8A-211ENST00000559742 HNRNPUL2Q1KMD3 747 aaKnown RBP28.28■■■□□ 2.12
PDE8A-211ENST00000559742 ERICH3Q5RHP9 1530 aa28.27■■■□□ 2.12
PDE8A-211ENST00000559742 CUX2O14529 1486 aa28.22■■■□□ 2.11
PDE8A-211ENST00000559742 DNAJC5BQ9UF47 199 aa28.19■■■□□ 2.1
PDE8A-211ENST00000559742 DIEXFQ68CQ4 756 aaKnown RBP28.16■■■□□ 2.1
PDE8A-211ENST00000559742 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
PDE8A-211ENST00000559742 ARAP1Q96P48 1450 aa28.14■■■□□ 2.1
PDE8A-211ENST00000559742 NESP48681 1621 aa28.13■■■□□ 2.09
PDE8A-211ENST00000559742 FANCD2Q9BXW9 1451 aa28.12■■■□□ 2.09
PDE8A-211ENST00000559742 IGF1RP08069 1367 aa28.08■■■□□ 2.09
PDE8A-211ENST00000559742 KANK4Q5T7N3 995 aaPredicted RBP28.05■■■□□ 2.08
PDE8A-211ENST00000559742 CARMIL1Q5VZK9 1371 aa27.98■■■□□ 2.07
PDE8A-211ENST00000559742 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
PDE8A-211ENST00000559742 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
PDE8A-211ENST00000559742 TOPBP1Q92547 1522 aa27.88■■■□□ 2.05
PDE8A-211ENST00000559742 DNMBPQ6XZF7 1577 aa27.87■■■□□ 2.05
PDE8A-211ENST00000559742 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
PDE8A-211ENST00000559742 P3H3Q8IVL6 736 aa27.86■■■□□ 2.05
PDE8A-211ENST00000559742 ITGAEP38570 1179 aa27.75■■■□□ 2.03
PDE8A-211ENST00000559742 ATP1B4Q9UN42 357 aaPredicted RBP27.75■■■□□ 2.03
PDE8A-211ENST00000559742 ABCA10Q8WWZ4 1543 aa27.74■■■□□ 2.03
PDE8A-211ENST00000559742 URB2Q14146 1524 aaKnown RBP27.74■■■□□ 2.03
PDE8A-211ENST00000559742 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms