Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.082e-123■■■■■ 317.5
CSTF2P33240 NEDD4L-223ENST00000588516 1304 ntTSL 513.35□□□□□ -0.271e-12■■■■■ 170.7
CSTF2P33240 NEDD4L-211ENST00000585363 241 ntTSL 55.79□□□□□ -1.483e-8■■■■■ 141.5
CSTF2P33240 NEDD4L-232ENST00000591579 144 ntTSL 1 (best)13.06□□□□□ -0.322e-8■■■■■ 130.5
CSTF2P33240 NEDD4L-233ENST00000591989 233 ntTSL 312.18□□□□□ -0.462e-8■■■■■ 130.5
CSTF2P33240 NEDD4L-231ENST00000590694 165 ntTSL 54.72□□□□□ -1.652e-8■■■■■ 130.5
CSTF2P33240 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.26□□□□□ -1.099e-8■■■■■ 125
CSTF2P33240 NEDD4L-236ENST00000592846 484 ntTSL 46.13□□□□□ -1.431e-7■■■■■ 122
CSTF2P33240 SRSF1-203ENST00000581497 438 ntTSL 37.73□□□□□ -1.172e-107■■■■■ 111.2
CSTF2P33240 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.31□□□□□ -0.121e-7■■■■■ 107.5
CSTF2P33240 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC9.28□□□□□ -0.921e-7■■■■■ 107.5
CSTF2P33240 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.11■□□□□ 0.978e-8■■■■■ 93.4
CSTF2P33240 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.168e-8■■■■■ 93.4
CSTF2P33240 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.058e-8■■■■■ 93.4
CSTF2P33240 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.77□□□□□ -0.372e-13■■■■■ 79.7
CSTF2P33240 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC10.03□□□□□ -0.81e-57■■■■■ 72.5
CSTF2P33240 AL355987.4-202ENST00000459985 1900 ntTSL 221.53■■□□□ 1.043e-27■■■■■ 72.5
CSTF2P33240 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.378e-9■■■■■ 71.3
CSTF2P33240 LDLRAD4-212ENST00000587905 743 ntTSL 519.92■□□□□ 0.782e-20■■■■■ 68.7
CSTF2P33240 LDLRAD4-215ENST00000590371 598 ntTSL 218.02■□□□□ 0.482e-20■■■■■ 68.7
CSTF2P33240 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.16□□□□□ -0.32e-20■■■■■ 68.7
CSTF2P33240 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.422e-20■■■■■ 68.7
CSTF2P33240 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.21e-7■■■■■ 67.4
CSTF2P33240 LRRFIP1-212ENST00000483443 1069 ntTSL 312.87□□□□□ -0.351e-7■■■■■ 67.4
CSTF2P33240 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.9■■□□□ 1.742e-45■■■■■ 66.1
CSTF2P33240 CPNE1-207ENST00000414664 1070 ntTSL 524.69■■□□□ 1.542e-45■■■■■ 66.1
CSTF2P33240 CPNE1-212ENST00000430570 1332 ntTSL 524.3■■□□□ 1.482e-45■■■■■ 66.1
CSTF2P33240 CPNE1-216ENST00000437340 1755 ntTSL 1 (best)23.78■■□□□ 1.42e-45■■■■■ 66.1
CSTF2P33240 CPNE1-205ENST00000401607 1795 ntTSL 523.74■■□□□ 1.392e-45■■■■■ 66.1
CSTF2P33240 CPNE1-217ENST00000439669 784 ntTSL 523.55■■□□□ 1.362e-45■■■■■ 66.1
CSTF2P33240 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.332e-45■■■■■ 66.1
CSTF2P33240 CPNE1-220ENST00000458038 596 ntTSL 321.45■■□□□ 1.022e-45■■■■■ 66.1
CSTF2P33240 CPNE1-211ENST00000420363 821 ntTSL 220.87■□□□□ 0.932e-45■■■■■ 66.1
CSTF2P33240 CPNE1-219ENST00000440240 746 ntTSL 520.61■□□□□ 0.892e-45■■■■■ 66.1
CSTF2P33240 CPNE1-204ENST00000397443 1928 ntAPPRIS P1 TSL 520.07■□□□□ 0.82e-45■■■■■ 66.1
CSTF2P33240 CPNE1-210ENST00000416778 744 ntTSL 217.61■□□□□ 0.412e-45■■■■■ 66.1
CSTF2P33240 CPNE1-213ENST00000434795 831 ntTSL 317.61■□□□□ 0.412e-45■■■■■ 66.1
CSTF2P33240 CPNE1-224ENST00000483359 1975 ntTSL 517.18■□□□□ 0.342e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.182e-45■■■■■ 66.1
CSTF2P33240 CPNE1-208ENST00000414711 673 ntTSL 515.96■□□□□ 0.152e-45■■■■■ 66.1
CSTF2P33240 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.022e-45■■■■■ 66.1
CSTF2P33240 CPNE1-215ENST00000437100 826 ntTSL 514.21□□□□□ -0.132e-45■■■■■ 66.1
CSTF2P33240 CPNE1-206ENST00000412056 998 ntTSL 313.5□□□□□ -0.252e-45■■■■■ 66.1
CSTF2P33240 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.32□□□□□ -0.442e-45■■■■■ 66.1
CSTF2P33240 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.512e-45■■■■■ 66.1
CSTF2P33240 CPNE1-214ENST00000435747 400 ntTSL 310.48□□□□□ -0.732e-45■■■■■ 66.1
CSTF2P33240 CPNE1-218ENST00000439806 748 ntTSL 59.78□□□□□ -0.842e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-201ENST00000454607 679 ntAPPRIS ALT2 TSL 29.77□□□□□ -0.852e-45■■■■■ 66.1
CSTF2P33240 AL109827.1-202ENST00000441563 611 ntAPPRIS ALT2 TSL 29.77□□□□□ -0.852e-45■■■■■ 66.1
CSTF2P33240 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.942e-45■■■■■ 66.1
CSTF2P33240 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.472e-23■■■■■ 62.4
CSTF2P33240 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.213e-41■■■■■ 61.7
CSTF2P33240 ATP2C1-217ENST00000509662 559 ntTSL 423.31■■□□□ 1.324e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.224e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.87□□□□□ -0.034e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.154e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.29□□□□□ -0.284e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.2□□□□□ -0.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-209ENST00000505072 556 ntTSL 412.16□□□□□ -0.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-204ENST00000428331 4795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.754e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.6□□□□□ -1.194e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.92□□□□□ -1.464e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.584e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.74□□□□□ -1.654e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.724e-21■■■■■ 61.4
CSTF2P33240 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.894e-21■■■■■ 61.4
CSTF2P33240 SMCHD1-213ENST00000609587 460 nt3.88□□□□□ -1.791e-21■■■■■ 58
CSTF2P33240 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.495e-20■■■■■ 57.8
CSTF2P33240 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC10.7□□□□□ -0.75e-20■■■■■ 57.8
CSTF2P33240 PHKB-217ENST00000570047 797 ntTSL 310.07□□□□□ -0.85e-20■■■■■ 57.8
CSTF2P33240 PHKB-214ENST00000567402 1617 ntTSL 1 (best)9.68□□□□□ -0.865e-20■■■■■ 57.8
CSTF2P33240 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.34□□□□□ -1.235e-20■■■■■ 57.8
CSTF2P33240 ABCD3-204ENST00000468860 661 ntTSL 317.79■□□□□ 0.443e-7■■■■■ 55.9
CSTF2P33240 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC11.79□□□□□ -0.523e-7■■■■■ 55.9
CSTF2P33240 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.33e-7■■■■■ 55.9
CSTF2P33240 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.27e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.14□□□□□ -0.317e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13□□□□□ -0.337e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.587e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC10.11□□□□□ -0.797e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-217ENST00000486653 563 ntTSL 49.81□□□□□ -0.847e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.39□□□□□ -1.077e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-205ENST00000396059 1983 ntTSL 1 (best)8.36□□□□□ -1.077e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.01□□□□□ -1.137e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.42□□□□□ -1.227e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.24□□□□□ -1.257e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-211ENST00000467839 566 ntTSL 26.88□□□□□ -1.317e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-208ENST00000432266 569 ntTSL 46.36□□□□□ -1.397e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-216ENST00000483534 1155 ntTSL 1 (best)5.48□□□□□ -1.537e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-221ENST00000493090 563 ntTSL 45.33□□□□□ -1.567e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-219ENST00000490555 549 ntTSL 44.87□□□□□ -1.637e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-220ENST00000492371 535 ntTSL 32.83□□□□□ -1.967e-7■■■■■ 54.7
CSTF2P33240 UBE2V1-214ENST00000472923 421 ntTSL 52.74□□□□□ -1.977e-7■■■■■ 54.7
CSTF2P33240 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.644e-7■■■■■ 54.6
CSTF2P33240 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.472e-11■■■■■ 54.3
CSTF2P33240 TNFAIP3-201ENST00000237289 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.682e-11■■■■■ 54.3
CSTF2P33240 TNFAIP3-208ENST00000615468 3818 ntTSL 5 BASIC10.1□□□□□ -0.792e-11■■■■■ 54.3
CSTF2P33240 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC9.41□□□□□ -0.92e-11■■■■■ 54.3
CSTF2P33240 CRIM1-203ENST00000426856 667 ntTSL 315.12■□□□□ 0.013e-8■■■■■ 54.2
CSTF2P33240 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.7■□□□□ 0.581e-24■■■■■ 54
Retrieved 100 of 6,735 protein–RNA pairs in 26.8 ms