RNA–Protein interactions for RNA: ENST00000557339.5

LINC01146-207, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3 BASIC

Gene LINC01146, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-207ENST00000557339 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
LINC01146-207ENST00000557339 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
LINC01146-207ENST00000557339 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
LINC01146-207ENST00000557339 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
LINC01146-207ENST00000557339 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
LINC01146-207ENST00000557339 FOXD1Q16676 465 aa17.68■□□□□ 0.42
LINC01146-207ENST00000557339 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
LINC01146-207ENST00000557339 ADRA2BP18089 450 aa17.04■□□□□ 0.32
LINC01146-207ENST00000557339 PIAS4Q8N2W9 510 aaPredicted RBP16.67■□□□□ 0.26
LINC01146-207ENST00000557339 MSH5O43196 834 aa16.23■□□□□ 0.19
LINC01146-207ENST00000557339 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
LINC01146-207ENST00000557339 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
LINC01146-207ENST00000557339 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
LINC01146-207ENST00000557339 KCNA4P22459 653 aa15.39■□□□□ 0.05
LINC01146-207ENST00000557339 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
LINC01146-207ENST00000557339 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
LINC01146-207ENST00000557339 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
LINC01146-207ENST00000557339 NPM3O75607 178 aaKnown RBP15.08■□□□□ 0
LINC01146-207ENST00000557339 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
LINC01146-207ENST00000557339 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
LINC01146-207ENST00000557339 POTEDQ86YR6 584 aa14.81□□□□□ -0.04
LINC01146-207ENST00000557339 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
LINC01146-207ENST00000557339 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
LINC01146-207ENST00000557339 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
LINC01146-207ENST00000557339 NISCHQ9Y2I1 1504 aa14.34□□□□□ -0.11
LINC01146-207ENST00000557339 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
LINC01146-207ENST00000557339 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
LINC01146-207ENST00000557339 ZBTB22O15209 634 aa14.18□□□□□ -0.14
LINC01146-207ENST00000557339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC01146-207ENST00000557339 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
LINC01146-207ENST00000557339 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
LINC01146-207ENST00000557339 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
LINC01146-207ENST00000557339 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
LINC01146-207ENST00000557339 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
LINC01146-207ENST00000557339 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
LINC01146-207ENST00000557339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
LINC01146-207ENST00000557339 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
LINC01146-207ENST00000557339 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
LINC01146-207ENST00000557339 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
LINC01146-207ENST00000557339 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
LINC01146-207ENST00000557339 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
LINC01146-207ENST00000557339 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
LINC01146-207ENST00000557339 APLP2Q06481 763 aa13.56□□□□□ -0.24
LINC01146-207ENST00000557339 CAPN15O75808 1086 aa13.52□□□□□ -0.25
LINC01146-207ENST00000557339 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
LINC01146-207ENST00000557339 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
LINC01146-207ENST00000557339 ABCB7O75027 752 aa13.3□□□□□ -0.28
LINC01146-207ENST00000557339 DSG3P32926 999 aa13.29□□□□□ -0.28
LINC01146-207ENST00000557339 POLA2Q14181 598 aa13.25□□□□□ -0.29
LINC01146-207ENST00000557339 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
LINC01146-207ENST00000557339 FBLN2P98095 1184 aa12.95□□□□□ -0.34
LINC01146-207ENST00000557339 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
LINC01146-207ENST00000557339 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
LINC01146-207ENST00000557339 FKBP8Q14318 412 aa12.74□□□□□ -0.37
LINC01146-207ENST00000557339 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
LINC01146-207ENST00000557339 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
LINC01146-207ENST00000557339 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
LINC01146-207ENST00000557339 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
LINC01146-207ENST00000557339 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
LINC01146-207ENST00000557339 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
LINC01146-207ENST00000557339 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
LINC01146-207ENST00000557339 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
LINC01146-207ENST00000557339 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC01146-207ENST00000557339 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
LINC01146-207ENST00000557339 PROM2Q8N271 834 aa12.46□□□□□ -0.41
LINC01146-207ENST00000557339 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
LINC01146-207ENST00000557339 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
LINC01146-207ENST00000557339 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
LINC01146-207ENST00000557339 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
LINC01146-207ENST00000557339 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
LINC01146-207ENST00000557339 FBXO3Q9UK99 471 aa12.2□□□□□ -0.46
LINC01146-207ENST00000557339 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
LINC01146-207ENST00000557339 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
LINC01146-207ENST00000557339 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
LINC01146-207ENST00000557339 MIER1Q8N108 512 aa12.02□□□□□ -0.49
LINC01146-207ENST00000557339 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.49
LINC01146-207ENST00000557339 ABCC9O60706 1549 aa12.01□□□□□ -0.49
LINC01146-207ENST00000557339 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
LINC01146-207ENST00000557339 CREBZFQ9NS37 354 aa12□□□□□ -0.49
LINC01146-207ENST00000557339 PLCD3Q8N3E9 789 aa11.99□□□□□ -0.49
LINC01146-207ENST00000557339 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
LINC01146-207ENST00000557339 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
LINC01146-207ENST00000557339 IFNLR1Q8IU57 520 aaPredicted RBP11.95□□□□□ -0.5
LINC01146-207ENST00000557339 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
LINC01146-207ENST00000557339 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
LINC01146-207ENST00000557339 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
LINC01146-207ENST00000557339 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
LINC01146-207ENST00000557339 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
LINC01146-207ENST00000557339 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
LINC01146-207ENST00000557339 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
LINC01146-207ENST00000557339 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
LINC01146-207ENST00000557339 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
LINC01146-207ENST00000557339 NACADO15069 1562 aa11.79□□□□□ -0.52
LINC01146-207ENST00000557339 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
LINC01146-207ENST00000557339 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
LINC01146-207ENST00000557339 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC01146-207ENST00000557339 NUBP1P53384 320 aa11.72□□□□□ -0.53
LINC01146-207ENST00000557339 POTEHQ6S545 545 aa11.71□□□□□ -0.53
LINC01146-207ENST00000557339 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
LINC01146-207ENST00000557339 DNAJC5Q9H3Z4 198 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms