RNA–Protein interactions for RNA: ENST00000557339.5

LINC01146-207, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3 BASIC

Gene LINC01146, Length 397 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-207ENST00000557339 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
LINC01146-207ENST00000557339 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
LINC01146-207ENST00000557339 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
LINC01146-207ENST00000557339 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
LINC01146-207ENST00000557339 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
LINC01146-207ENST00000557339 FOXD1Q16676 465 aa17.68■□□□□ 0.42
LINC01146-207ENST00000557339 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
LINC01146-207ENST00000557339 ADRA2BP18089 450 aa17.04■□□□□ 0.32
LINC01146-207ENST00000557339 PIAS4Q8N2W9 510 aaPredicted RBP16.67■□□□□ 0.26
LINC01146-207ENST00000557339 MSH5O43196 834 aa16.23■□□□□ 0.19
LINC01146-207ENST00000557339 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
LINC01146-207ENST00000557339 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
LINC01146-207ENST00000557339 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
LINC01146-207ENST00000557339 KCNA4P22459 653 aa15.39■□□□□ 0.05
LINC01146-207ENST00000557339 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
LINC01146-207ENST00000557339 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
LINC01146-207ENST00000557339 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
LINC01146-207ENST00000557339 NPM3O75607 178 aaKnown RBP15.08■□□□□ 0
LINC01146-207ENST00000557339 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
LINC01146-207ENST00000557339 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
LINC01146-207ENST00000557339 POTEDQ86YR6 584 aa14.81□□□□□ -0.04
LINC01146-207ENST00000557339 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
LINC01146-207ENST00000557339 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
LINC01146-207ENST00000557339 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
LINC01146-207ENST00000557339 NISCHQ9Y2I1 1504 aa14.34□□□□□ -0.11
LINC01146-207ENST00000557339 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
LINC01146-207ENST00000557339 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
LINC01146-207ENST00000557339 ZBTB22O15209 634 aa14.18□□□□□ -0.14
LINC01146-207ENST00000557339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC01146-207ENST00000557339 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
LINC01146-207ENST00000557339 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
LINC01146-207ENST00000557339 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
LINC01146-207ENST00000557339 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
LINC01146-207ENST00000557339 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
LINC01146-207ENST00000557339 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
LINC01146-207ENST00000557339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
LINC01146-207ENST00000557339 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
LINC01146-207ENST00000557339 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
LINC01146-207ENST00000557339 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
LINC01146-207ENST00000557339 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
LINC01146-207ENST00000557339 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
LINC01146-207ENST00000557339 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
LINC01146-207ENST00000557339 APLP2Q06481 763 aa13.56□□□□□ -0.24
LINC01146-207ENST00000557339 CAPN15O75808 1086 aa13.52□□□□□ -0.25
LINC01146-207ENST00000557339 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
LINC01146-207ENST00000557339 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
LINC01146-207ENST00000557339 ABCB7O75027 752 aa13.3□□□□□ -0.28
LINC01146-207ENST00000557339 DSG3P32926 999 aa13.29□□□□□ -0.28
LINC01146-207ENST00000557339 POLA2Q14181 598 aa13.25□□□□□ -0.29
LINC01146-207ENST00000557339 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
LINC01146-207ENST00000557339 FBLN2P98095 1184 aa12.95□□□□□ -0.34
LINC01146-207ENST00000557339 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
LINC01146-207ENST00000557339 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
LINC01146-207ENST00000557339 FKBP8Q14318 412 aa12.74□□□□□ -0.37
LINC01146-207ENST00000557339 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
LINC01146-207ENST00000557339 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
LINC01146-207ENST00000557339 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
LINC01146-207ENST00000557339 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
LINC01146-207ENST00000557339 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
LINC01146-207ENST00000557339 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
LINC01146-207ENST00000557339 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
LINC01146-207ENST00000557339 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
LINC01146-207ENST00000557339 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC01146-207ENST00000557339 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
LINC01146-207ENST00000557339 PROM2Q8N271 834 aa12.46□□□□□ -0.41
LINC01146-207ENST00000557339 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
LINC01146-207ENST00000557339 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
LINC01146-207ENST00000557339 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
LINC01146-207ENST00000557339 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
LINC01146-207ENST00000557339 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
LINC01146-207ENST00000557339 FBXO3Q9UK99 471 aa12.2□□□□□ -0.46
LINC01146-207ENST00000557339 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
LINC01146-207ENST00000557339 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
LINC01146-207ENST00000557339 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
LINC01146-207ENST00000557339 MIER1Q8N108 512 aa12.02□□□□□ -0.49
LINC01146-207ENST00000557339 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.49
LINC01146-207ENST00000557339 ABCC9O60706 1549 aa12.01□□□□□ -0.49
LINC01146-207ENST00000557339 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
LINC01146-207ENST00000557339 CREBZFQ9NS37 354 aa12□□□□□ -0.49
LINC01146-207ENST00000557339 PLCD3Q8N3E9 789 aa11.99□□□□□ -0.49
LINC01146-207ENST00000557339 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
LINC01146-207ENST00000557339 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
LINC01146-207ENST00000557339 IFNLR1Q8IU57 520 aaPredicted RBP11.95□□□□□ -0.5
LINC01146-207ENST00000557339 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
LINC01146-207ENST00000557339 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
LINC01146-207ENST00000557339 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
LINC01146-207ENST00000557339 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
LINC01146-207ENST00000557339 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
LINC01146-207ENST00000557339 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
LINC01146-207ENST00000557339 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
LINC01146-207ENST00000557339 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
LINC01146-207ENST00000557339 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
LINC01146-207ENST00000557339 NACADO15069 1562 aa11.79□□□□□ -0.52
LINC01146-207ENST00000557339 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
LINC01146-207ENST00000557339 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
LINC01146-207ENST00000557339 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC01146-207ENST00000557339 NUBP1P53384 320 aa11.72□□□□□ -0.53
LINC01146-207ENST00000557339 POTEHQ6S545 545 aa11.71□□□□□ -0.53
LINC01146-207ENST00000557339 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
LINC01146-207ENST00000557339 DNAJC5Q9H3Z4 198 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms