RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
TRAPPC12-204ENST00000415624 ABCC9O60706 1549 aa23.28■■□□□ 1.32
TRAPPC12-204ENST00000415624 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
TRAPPC12-204ENST00000415624 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
TRAPPC12-204ENST00000415624 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
TRAPPC12-204ENST00000415624 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
TRAPPC12-204ENST00000415624 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
TRAPPC12-204ENST00000415624 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
TRAPPC12-204ENST00000415624 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
TRAPPC12-204ENST00000415624 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
TRAPPC12-204ENST00000415624 NACADO15069 1562 aa21.36■■□□□ 1.01
TRAPPC12-204ENST00000415624 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
TRAPPC12-204ENST00000415624 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
TRAPPC12-204ENST00000415624 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
TRAPPC12-204ENST00000415624 CECR2Q9BXF3 1484 aa21.04■□□□□ 0.96
TRAPPC12-204ENST00000415624 SCRIBQ14160 1630 aa21■□□□□ 0.95
TRAPPC12-204ENST00000415624 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
TRAPPC12-204ENST00000415624 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
TRAPPC12-204ENST00000415624 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
TRAPPC12-204ENST00000415624 CUX2O14529 1486 aa20.35■□□□□ 0.85
TRAPPC12-204ENST00000415624 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
TRAPPC12-204ENST00000415624 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
TRAPPC12-204ENST00000415624 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
TRAPPC12-204ENST00000415624 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC12-204ENST00000415624 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
TRAPPC12-204ENST00000415624 WIZO95785 1651 aa19.87■□□□□ 0.77
TRAPPC12-204ENST00000415624 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC12-204ENST00000415624 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
TRAPPC12-204ENST00000415624 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
TRAPPC12-204ENST00000415624 NESP48681 1621 aa19.78■□□□□ 0.76
TRAPPC12-204ENST00000415624 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
TRAPPC12-204ENST00000415624 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
TRAPPC12-204ENST00000415624 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
TRAPPC12-204ENST00000415624 THOC2Q8NI27 1593 aaKnown RBP19.69■□□□□ 0.74
TRAPPC12-204ENST00000415624 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
TRAPPC12-204ENST00000415624 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
TRAPPC12-204ENST00000415624 TOP2AP11388 1531 aaKnown RBP19.64■□□□□ 0.73
TRAPPC12-204ENST00000415624 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
TRAPPC12-204ENST00000415624 LAMC3Q9Y6N6 1575 aa19.41■□□□□ 0.7
TRAPPC12-204ENST00000415624 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
TRAPPC12-204ENST00000415624 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
TRAPPC12-204ENST00000415624 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
TRAPPC12-204ENST00000415624 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
TRAPPC12-204ENST00000415624 WDR62O43379 1518 aa19.22■□□□□ 0.67
TRAPPC12-204ENST00000415624 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
TRAPPC12-204ENST00000415624 RIMBP3CA6NJZ7 1639 aa19.17■□□□□ 0.66
TRAPPC12-204ENST00000415624 RIMBP3BA6NNM3 1639 aa19.17■□□□□ 0.66
TRAPPC12-204ENST00000415624 RIMBP3Q9UFD9 1639 aa19.17■□□□□ 0.66
TRAPPC12-204ENST00000415624 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
TRAPPC12-204ENST00000415624 CFTRP13569 1480 aa19.08■□□□□ 0.64
TRAPPC12-204ENST00000415624 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC12-204ENST00000415624 ARHGEF11O15085 1522 aa19.01■□□□□ 0.63
TRAPPC12-204ENST00000415624 TRHP20396 242 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC12-204ENST00000415624 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
TRAPPC12-204ENST00000415624 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
TRAPPC12-204ENST00000415624 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
TRAPPC12-204ENST00000415624 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
TRAPPC12-204ENST00000415624 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
TRAPPC12-204ENST00000415624 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
TRAPPC12-204ENST00000415624 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC12-204ENST00000415624 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
TRAPPC12-204ENST00000415624 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
TRAPPC12-204ENST00000415624 CUX1P39880 1505 aa18.74■□□□□ 0.59
TRAPPC12-204ENST00000415624 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
TRAPPC12-204ENST00000415624 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
TRAPPC12-204ENST00000415624 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
TRAPPC12-204ENST00000415624 TOP2BQ02880 1626 aa18.7■□□□□ 0.58
TRAPPC12-204ENST00000415624 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
TRAPPC12-204ENST00000415624 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
TRAPPC12-204ENST00000415624 CHD1O14646 1710 aa18.59■□□□□ 0.57
TRAPPC12-204ENST00000415624 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
TRAPPC12-204ENST00000415624 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC12-204ENST00000415624 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
TRAPPC12-204ENST00000415624 WDR97A6NE52 1622 aa18.53■□□□□ 0.56
TRAPPC12-204ENST00000415624 FBLN2P98095 1184 aa18.51■□□□□ 0.55
TRAPPC12-204ENST00000415624 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
TRAPPC12-204ENST00000415624 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
TRAPPC12-204ENST00000415624 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRAPPC12-204ENST00000415624 ILDR1Q86SU0 546 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC12-204ENST00000415624 SOGA1O94964 1423 aa18.43■□□□□ 0.54
TRAPPC12-204ENST00000415624 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
TRAPPC12-204ENST00000415624 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
TRAPPC12-204ENST00000415624 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
TRAPPC12-204ENST00000415624 CLASP1Q7Z460 1538 aa18.35■□□□□ 0.53
TRAPPC12-204ENST00000415624 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
TRAPPC12-204ENST00000415624 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-204ENST00000415624 KIF27Q86VH2 1401 aa18.28■□□□□ 0.52
TRAPPC12-204ENST00000415624 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
TRAPPC12-204ENST00000415624 FAM9AQ8IZU1 332 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC12-204ENST00000415624 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC12-204ENST00000415624 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
TRAPPC12-204ENST00000415624 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
TRAPPC12-204ENST00000415624 EEA1Q15075 1411 aa18.2■□□□□ 0.5
TRAPPC12-204ENST00000415624 ERICH3Q5RHP9 1530 aa18.19■□□□□ 0.5
TRAPPC12-204ENST00000415624 CUL7Q14999 1698 aa18.19■□□□□ 0.5
TRAPPC12-204ENST00000415624 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
TRAPPC12-204ENST00000415624 KDM4FA0A1W2PPD8 638 aa18.13■□□□□ 0.49
TRAPPC12-204ENST00000415624 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC12-204ENST00000415624 KIF21BO75037 1637 aa18.09■□□□□ 0.49
TRAPPC12-204ENST00000415624 IGF1RP08069 1367 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms