RNA–Protein interactions for RNA: ENST00000318779.7

FOXP1-201, Transcript of forkhead box P1, humanhuman

TSL 1 (best) BASIC

Gene FOXP1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-201ENST00000318779 NISCHQ9Y2I1 1504 aa58.52■■■■■ 6.96
FOXP1-201ENST00000318779 CCDC180Q9P1Z9 1646 aa52.3■■■■■ 5.96
FOXP1-201ENST00000318779 ABCC9O60706 1549 aa52.25■■■■■ 5.96
FOXP1-201ENST00000318779 RB1CC1Q8TDY2 1594 aa49.68■■■■■ 5.54
FOXP1-201ENST00000318779 NACADO15069 1562 aa49.4■■■■■ 5.5
FOXP1-201ENST00000318779 DCAF8L2P0C7V8 631 aa49.26■■■■■ 5.48
FOXP1-201ENST00000318779 DNAJC5BQ9UF47 199 aa48.97■■■■■ 5.43
FOXP1-201ENST00000318779 MYO15BQ96JP2 1530 aa48.78■■■■■ 5.4
FOXP1-201ENST00000318779 PABPN1Q86U42 306 aaKnown RBP eCLIP48.72■■■■■ 5.39
FOXP1-201ENST00000318779 UNC13AQ9UPW8 1703 aa48.66■■■■■ 5.38
FOXP1-201ENST00000318779 ZCCHC6Q5VYS8 1495 aaKnown RBP48.56■■■■■ 5.36
FOXP1-201ENST00000318779 BICRAQ9NZM4 1560 aa48.41■■■■■ 5.34
FOXP1-201ENST00000318779 DCAF1Q9Y4B6 1507 aa48.27■■■■■ 5.32
FOXP1-201ENST00000318779 SCRIBQ14160 1630 aa47.81■■■■■ 5.24
FOXP1-201ENST00000318779 SHROOM4Q9ULL8 1493 aa47.54■■■■■ 5.2
FOXP1-201ENST00000318779 CC2D2AQ9P2K1 1620 aa47.18■■■■■ 5.14
FOXP1-201ENST00000318779 EIF4G1Q04637 1599 aaKnown RBP47.12■■■■■ 5.13
FOXP1-201ENST00000318779 CECR2Q9BXF3 1484 aa47■■■■■ 5.11
FOXP1-201ENST00000318779 NCAPD3P42695 1498 aa45.68■■■■■ 4.9
FOXP1-201ENST00000318779 ATAD2BQ9ULI0 1458 aa45.61■■■■■ 4.89
FOXP1-201ENST00000318779 SMARCA4P51532 1647 aa45.59■■■■■ 4.89
FOXP1-201ENST00000318779 SMARCA2P51531 1590 aa45.37■■■■■ 4.85
FOXP1-201ENST00000318779 BAZ1AQ9NRL2 1556 aaPredicted RBP45.33■■■■■ 4.85
FOXP1-201ENST00000318779 HMGXB3Q12766 1538 aa45.32■■■■■ 4.85
FOXP1-201ENST00000318779 MROH2BQ7Z745 1585 aa45.17■■■■■ 4.82
FOXP1-201ENST00000318779 PEG3Q9GZU2 1588 aa45.12■■■■■ 4.81
FOXP1-201ENST00000318779 BAZ1BQ9UIG0 1483 aaKnown RBP45.11■■■■■ 4.81
FOXP1-201ENST00000318779 NESP48681 1621 aa45.01■■■■■ 4.8
FOXP1-201ENST00000318779 ERCC6Q03468 1493 aa44.97■■■■■ 4.79
FOXP1-201ENST00000318779 CUX2O14529 1486 aa44.81■■■■■ 4.76
FOXP1-201ENST00000318779 DNAJC5Q9H3Z4 198 aa44.62■■■■■ 4.73
FOXP1-201ENST00000318779 WIZO95785 1651 aa44.61■■■■■ 4.73
FOXP1-201ENST00000318779 LAMC3Q9Y6N6 1575 aa44.54■■■■■ 4.72
FOXP1-201ENST00000318779 THOC2Q8NI27 1593 aaKnown RBP44.44■■■■■ 4.71
FOXP1-201ENST00000318779 KIF21AQ7Z4S6 1674 aa44.35■■■■■ 4.69
FOXP1-201ENST00000318779 CADPSQ9ULU8 1353 aa44.3■■■■■ 4.68
FOXP1-201ENST00000318779 RSF1Q96T23 1441 aaPredicted RBP44.29■■■■■ 4.68
FOXP1-201ENST00000318779 PDS5BQ9NTI5 1447 aa44.25■■■■■ 4.67
FOXP1-201ENST00000318779 TOP2AP11388 1531 aaKnown RBP43.99■■■■■ 4.63
FOXP1-201ENST00000318779 MRC2Q9UBG0 1479 aa43.94■■■■■ 4.62
FOXP1-201ENST00000318779 CFTRP13569 1480 aa43.85■■■■■ 4.61
FOXP1-201ENST00000318779 WDR62O43379 1518 aa43.84■■■■■ 4.61
FOXP1-201ENST00000318779 FANCD2Q9BXW9 1451 aa43.8■■■■■ 4.6
FOXP1-201ENST00000318779 CEP164Q9UPV0 1460 aa43.77■■■■■ 4.6
FOXP1-201ENST00000318779 CCDC88BA6NC98 1476 aa43.56■■■■■ 4.56
FOXP1-201ENST00000318779 URB2Q14146 1524 aaKnown RBP43.5■■■■■ 4.55
FOXP1-201ENST00000318779 PRDM2Q13029 1718 aa43.31■■■■■ 4.52
FOXP1-201ENST00000318779 TOPBP1Q92547 1522 aa43.02■■■■■ 4.48
FOXP1-201ENST00000318779 ZNF608Q9ULD9 1512 aaPredicted RBP42.96■■■■■ 4.47
FOXP1-201ENST00000318779 IFT140Q96RY7 1462 aa42.89■■■■■ 4.46
FOXP1-201ENST00000318779 DNMBPQ6XZF7 1577 aa42.83■■■■■ 4.45
FOXP1-201ENST00000318779 OSCARQ8IYS5 282 aa42.81■■■■■ 4.44
FOXP1-201ENST00000318779 TRIM41Q8WV44 630 aa42.76■■■■■ 4.44
FOXP1-201ENST00000318779 ABCC8Q09428 1581 aa42.76■■■■■ 4.44
FOXP1-201ENST00000318779 EIF4G3O43432 1585 aaKnown RBP42.65■■■■■ 4.42
FOXP1-201ENST00000318779 TARBP1Q13395 1621 aaKnown RBP42.64■■■■■ 4.42
FOXP1-201ENST00000318779 POLA1P09884 1462 aaPredicted RBP42.61■■■■■ 4.41
FOXP1-201ENST00000318779 AQRO60306 1485 aaKnown RBP eCLIP42.56■■■■■ 4.43e-6■■■□□ 15.7
FOXP1-201ENST00000318779 RAD54L2Q9Y4B4 1467 aa42.5■■■■■ 4.39
FOXP1-201ENST00000318779 SUPT5HO00267 1087 aaKnown RBP42.46■■■■■ 4.39
FOXP1-201ENST00000318779 CUX1P39880 1505 aa42.41■■■■■ 4.38
FOXP1-201ENST00000318779 SOGA1O94964 1423 aa42.37■■■■■ 4.37
FOXP1-201ENST00000318779 FGD5Q6ZNL6 1462 aa42.36■■■■■ 4.37
FOXP1-201ENST00000318779 TDRD9Q8NDG6 1382 aaKnown RBP42.33■■■■■ 4.37
FOXP1-201ENST00000318779 RIMBP3CA6NJZ7 1639 aa42.31■■■■■ 4.36
FOXP1-201ENST00000318779 RIMBP3BA6NNM3 1639 aa42.31■■■■■ 4.36
FOXP1-201ENST00000318779 RIMBP3Q9UFD9 1639 aa42.31■■■■■ 4.36
FOXP1-201ENST00000318779 CHD1O14646 1710 aa42.27■■■■■ 4.36
FOXP1-201ENST00000318779 ARHGEF11O15085 1522 aa42.2■■■■■ 4.35
FOXP1-201ENST00000318779 FBLN2P98095 1184 aa42.14■■■■■ 4.34
FOXP1-201ENST00000318779 SNAPC4Q5SXM2 1469 aa42.1■■■■■ 4.33
FOXP1-201ENST00000318779 WDR97A6NE52 1622 aa42.04■■■■■ 4.32
FOXP1-201ENST00000318779 GRIN2BQ13224 1484 aa41.95■■■■■ 4.31
FOXP1-201ENST00000318779 MAGI1Q96QZ7 1491 aaPredicted RBP41.91■■■■■ 4.3
FOXP1-201ENST00000318779 ABCA10Q8WWZ4 1543 aa41.87■■■■■ 4.29
FOXP1-201ENST00000318779 CYB5RLQ6IPT4 315 aa41.86■■■■■ 4.29
FOXP1-201ENST00000318779 ARAP1Q96P48 1450 aa41.85■■■■■ 4.29
FOXP1-201ENST00000318779 GAPVD1Q14C86 1478 aa41.85■■■■■ 4.29
FOXP1-201ENST00000318779 CLASP1Q7Z460 1538 aa41.84■■■■■ 4.29
FOXP1-201ENST00000318779 CHMP7Q8WUX9 453 aaPredicted RBP41.83■■■■■ 4.29
FOXP1-201ENST00000318779 PBRM1Q86U86 1689 aa41.8■■■■■ 4.28
FOXP1-201ENST00000318779 ABCA5Q8WWZ7 1642 aa41.8■■■■■ 4.28
FOXP1-201ENST00000318779 SYNJ2O15056 1496 aa41.79■■■■■ 4.28
FOXP1-201ENST00000318779 SYNJ1O43426 1573 aa41.76■■■■■ 4.27
FOXP1-201ENST00000318779 WRNQ14191 1432 aaPredicted RBP eCLIP41.7■■■■■ 4.27
FOXP1-201ENST00000318779 TOP2BQ02880 1626 aa41.7■■■■■ 4.27
FOXP1-201ENST00000318779 BIVM-ERCC5R4GMW8 1640 aa41.7■■■■■ 4.27
FOXP1-201ENST00000318779 ADAMTS12P58397 1594 aa41.47■■■■■ 4.23
FOXP1-201ENST00000318779 GRIN2AQ12879 1464 aa41.44■■■■■ 4.22
FOXP1-201ENST00000318779 CEP170Q5SW79 1584 aa41.35■■■■■ 4.21
FOXP1-201ENST00000318779 NUP160Q12769 1436 aa41.32■■■■■ 4.21
FOXP1-201ENST00000318779 FHAD1B1AJZ9 1412 aa41.31■■■■■ 4.2
FOXP1-201ENST00000318779 ERCC6L2Q5T890 1561 aa41.31■■■■■ 4.2
FOXP1-201ENST00000318779 ERICH3Q5RHP9 1530 aa41.3■■■■■ 4.2
FOXP1-201ENST00000318779 TRHP20396 242 aaPredicted RBP41.25■■■■■ 4.19
FOXP1-201ENST00000318779 SHROOM2Q13796 1616 aa41.11■■■■■ 4.17
FOXP1-201ENST00000318779 IGF1RP08069 1367 aa40.92■■■■■ 4.14
FOXP1-201ENST00000318779 PRG4Q92954 1404 aaPredicted RBP40.89■■■■■ 4.14
FOXP1-201ENST00000318779 RUSC2Q8N2Y8 1516 aa40.88■■■■■ 4.14
FOXP1-201ENST00000318779 JPH4Q96JJ6 628 aa40.85■■■■■ 4.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms