RNA–Protein interactions for RNA: ENST00000310298.8

PDE8A-201, Transcript of phosphodiesterase 8A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDE8A, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-201ENST00000310298 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
PDE8A-201ENST00000310298 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
PDE8A-201ENST00000310298 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
PDE8A-201ENST00000310298 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
PDE8A-201ENST00000310298 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
PDE8A-201ENST00000310298 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
PDE8A-201ENST00000310298 HRCP23327 699 aa23.06■■□□□ 1.28
PDE8A-201ENST00000310298 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
PDE8A-201ENST00000310298 ABCC9O60706 1549 aa22.78■■□□□ 1.24
PDE8A-201ENST00000310298 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
PDE8A-201ENST00000310298 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
PDE8A-201ENST00000310298 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
PDE8A-201ENST00000310298 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
PDE8A-201ENST00000310298 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
PDE8A-201ENST00000310298 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
PDE8A-201ENST00000310298 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
PDE8A-201ENST00000310298 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
PDE8A-201ENST00000310298 TRIM41Q8WV44 630 aa22.22■■□□□ 1.15
PDE8A-201ENST00000310298 TRIM26Q12899 539 aaPredicted RBP22.15■■□□□ 1.14
PDE8A-201ENST00000310298 ZEB1P37275 1124 aaPredicted RBP22.12■■□□□ 1.13
PDE8A-201ENST00000310298 YTHDC1Q96MU7 727 aaKnown RBP22.1■■□□□ 1.13
PDE8A-201ENST00000310298 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
PDE8A-201ENST00000310298 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
PDE8A-201ENST00000310298 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
PDE8A-201ENST00000310298 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
PDE8A-201ENST00000310298 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
PDE8A-201ENST00000310298 MYT1Q01538 1121 aa21.78■■□□□ 1.08
PDE8A-201ENST00000310298 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
PDE8A-201ENST00000310298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
PDE8A-201ENST00000310298 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
PDE8A-201ENST00000310298 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
PDE8A-201ENST00000310298 RSF1Q96T23 1441 aaPredicted RBP21.57■■□□□ 1.04
PDE8A-201ENST00000310298 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
PDE8A-201ENST00000310298 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
PDE8A-201ENST00000310298 ACIN1Q9UKV3 1341 aaKnown RBP21.53■■□□□ 1.04
PDE8A-201ENST00000310298 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
PDE8A-201ENST00000310298 NEUROD1Q13562 356 aa21.49■■□□□ 1.03
PDE8A-201ENST00000310298 NACADO15069 1562 aa21.41■■□□□ 1.02
PDE8A-201ENST00000310298 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
PDE8A-201ENST00000310298 APLP2Q06481 763 aa21.23■□□□□ 0.99
PDE8A-201ENST00000310298 MROH2BQ7Z745 1585 aa21.2■□□□□ 0.98
PDE8A-201ENST00000310298 HNRNPUL2Q1KMD3 747 aaKnown RBP21.19■□□□□ 0.98
PDE8A-201ENST00000310298 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
PDE8A-201ENST00000310298 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
PDE8A-201ENST00000310298 BCANQ96GW7 911 aa21.03■□□□□ 0.96
PDE8A-201ENST00000310298 WIZO95785 1651 aa20.95■□□□□ 0.94
PDE8A-201ENST00000310298 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
PDE8A-201ENST00000310298 ZNF316A6NFI3 1004 aaPredicted RBP20.92■□□□□ 0.94
PDE8A-201ENST00000310298 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
PDE8A-201ENST00000310298 NEFLP07196 543 aa20.88■□□□□ 0.93
PDE8A-201ENST00000310298 ITGAEP38570 1179 aa20.8■□□□□ 0.92
PDE8A-201ENST00000310298 MIER1Q8N108 512 aa20.77■□□□□ 0.92
PDE8A-201ENST00000310298 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
PDE8A-201ENST00000310298 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
PDE8A-201ENST00000310298 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
PDE8A-201ENST00000310298 SOGA1O94964 1423 aa20.65■□□□□ 0.9
PDE8A-201ENST00000310298 P3H3Q8IVL6 736 aa20.64■□□□□ 0.9
PDE8A-201ENST00000310298 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
PDE8A-201ENST00000310298 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
PDE8A-201ENST00000310298 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
PDE8A-201ENST00000310298 CNGB1Q14028 1251 aaPredicted RBP20.46■□□□□ 0.87
PDE8A-201ENST00000310298 ATAD2BQ9ULI0 1458 aa20.46■□□□□ 0.87
PDE8A-201ENST00000310298 FKBP8Q14318 412 aa20.44■□□□□ 0.86
PDE8A-201ENST00000310298 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
PDE8A-201ENST00000310298 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
PDE8A-201ENST00000310298 CEP162Q5TB80 1403 aa20.4■□□□□ 0.86
PDE8A-201ENST00000310298 BCL11AQ9H165 835 aa20.36■□□□□ 0.85
PDE8A-201ENST00000310298 ANP32EQ9BTT0 268 aa20.34■□□□□ 0.85
PDE8A-201ENST00000310298 FBLN2P98095 1184 aa20.33■□□□□ 0.84
PDE8A-201ENST00000310298 SMARCA2P51531 1590 aa20.33■□□□□ 0.84
PDE8A-201ENST00000310298 FAM50AQ14320 339 aaKnown RBP20.31■□□□□ 0.84
PDE8A-201ENST00000310298 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
PDE8A-201ENST00000310298 CLIP1P30622 1438 aa20.28■□□□□ 0.84
PDE8A-201ENST00000310298 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
PDE8A-201ENST00000310298 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
PDE8A-201ENST00000310298 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
PDE8A-201ENST00000310298 GOLGA3Q08378 1498 aa20.23■□□□□ 0.83
PDE8A-201ENST00000310298 EEA1Q15075 1411 aa20.18■□□□□ 0.82
PDE8A-201ENST00000310298 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
PDE8A-201ENST00000310298 UNC13AQ9UPW8 1703 aa20.17■□□□□ 0.82
PDE8A-201ENST00000310298 IRX6P78412 446 aaPredicted RBP20.16■□□□□ 0.82
PDE8A-201ENST00000310298 POLR3GLQ9BT43 218 aa20.14■□□□□ 0.82
PDE8A-201ENST00000310298 HIRIP3Q9BW71 556 aaPredicted RBP20.14■□□□□ 0.81
PDE8A-201ENST00000310298 CDK11AQ9UQ88 783 aaPredicted RBP20.13■□□□□ 0.81
PDE8A-201ENST00000310298 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
PDE8A-201ENST00000310298 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
PDE8A-201ENST00000310298 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
PDE8A-201ENST00000310298 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
PDE8A-201ENST00000310298 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.81
PDE8A-201ENST00000310298 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
PDE8A-201ENST00000310298 CUX2O14529 1486 aa20.06■□□□□ 0.8
PDE8A-201ENST00000310298 ANP32CO43423 234 aa20.05■□□□□ 0.8
PDE8A-201ENST00000310298 NBR1Q14596 966 aa20.04■□□□□ 0.8
PDE8A-201ENST00000310298 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
PDE8A-201ENST00000310298 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
PDE8A-201ENST00000310298 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
PDE8A-201ENST00000310298 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
PDE8A-201ENST00000310298 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
PDE8A-201ENST00000310298 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
PDE8A-201ENST00000310298 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms