RNA–Protein interactions for RNA: ENST00000394553.5

PDE8A-203, Transcript of phosphodiesterase 8A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDE8A, Length 3,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-203ENST00000394553 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
PDE8A-203ENST00000394553 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.7
PDE8A-203ENST00000394553 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
PDE8A-203ENST00000394553 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.65
PDE8A-203ENST00000394553 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
PDE8A-203ENST00000394553 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
PDE8A-203ENST00000394553 FAM9AQ8IZU1 332 aaPredicted RBP23.68■■□□□ 1.38
PDE8A-203ENST00000394553 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
PDE8A-203ENST00000394553 LOC105371045A0A1W2PR82 267 aa23.48■■□□□ 1.35
PDE8A-203ENST00000394553 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
PDE8A-203ENST00000394553 HRCP23327 699 aa23.24■■□□□ 1.31
PDE8A-203ENST00000394553 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
PDE8A-203ENST00000394553 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
PDE8A-203ENST00000394553 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
PDE8A-203ENST00000394553 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
PDE8A-203ENST00000394553 MYO15BQ96JP2 1530 aa22.85■■□□□ 1.25
PDE8A-203ENST00000394553 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
PDE8A-203ENST00000394553 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
PDE8A-203ENST00000394553 CCDC180Q9P1Z9 1646 aa22.65■■□□□ 1.22
PDE8A-203ENST00000394553 ABCC9O60706 1549 aa22.65■■□□□ 1.22
PDE8A-203ENST00000394553 ZEB1P37275 1124 aaPredicted RBP22.61■■□□□ 1.21
PDE8A-203ENST00000394553 UBTFP17480 764 aaKnown RBP22.57■■□□□ 1.2
PDE8A-203ENST00000394553 APLP2Q06481 763 aa22.42■■□□□ 1.18
PDE8A-203ENST00000394553 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
PDE8A-203ENST00000394553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.18
PDE8A-203ENST00000394553 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
PDE8A-203ENST00000394553 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
PDE8A-203ENST00000394553 RSF1Q96T23 1441 aaPredicted RBP22.17■■□□□ 1.14
PDE8A-203ENST00000394553 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
PDE8A-203ENST00000394553 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
PDE8A-203ENST00000394553 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
PDE8A-203ENST00000394553 ATP1B4Q9UN42 357 aaPredicted RBP21.92■■□□□ 1.1
PDE8A-203ENST00000394553 DIEXFQ68CQ4 756 aaKnown RBP21.88■■□□□ 1.09
PDE8A-203ENST00000394553 CECR2Q9BXF3 1484 aa21.88■■□□□ 1.09
PDE8A-203ENST00000394553 ITGAEP38570 1179 aa21.85■■□□□ 1.09
PDE8A-203ENST00000394553 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
PDE8A-203ENST00000394553 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
PDE8A-203ENST00000394553 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
PDE8A-203ENST00000394553 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.04
PDE8A-203ENST00000394553 GTF3C3Q9Y5Q9 886 aa21.58■■□□□ 1.04
PDE8A-203ENST00000394553 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
PDE8A-203ENST00000394553 NACADO15069 1562 aa21.5■■□□□ 1.03
PDE8A-203ENST00000394553 ZNF316A6NFI3 1004 aaPredicted RBP21.48■■□□□ 1.03
PDE8A-203ENST00000394553 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
PDE8A-203ENST00000394553 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
PDE8A-203ENST00000394553 CEP162Q5TB80 1403 aa21.41■■□□□ 1.02
PDE8A-203ENST00000394553 SOGA1O94964 1423 aa21.39■■□□□ 1.01
PDE8A-203ENST00000394553 WIZO95785 1651 aa21.38■■□□□ 1.01
PDE8A-203ENST00000394553 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
PDE8A-203ENST00000394553 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
PDE8A-203ENST00000394553 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
PDE8A-203ENST00000394553 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
PDE8A-203ENST00000394553 P3H3Q8IVL6 736 aa21.29■■□□□ 1
PDE8A-203ENST00000394553 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
PDE8A-203ENST00000394553 CLIP1P30622 1438 aa21.2■□□□□ 0.98
PDE8A-203ENST00000394553 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
PDE8A-203ENST00000394553 MIER1Q8N108 512 aa21.18■□□□□ 0.98
PDE8A-203ENST00000394553 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
PDE8A-203ENST00000394553 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
PDE8A-203ENST00000394553 EEA1Q15075 1411 aa21.06■□□□□ 0.96
PDE8A-203ENST00000394553 CNGB1Q14028 1251 aaPredicted RBP21.03■□□□□ 0.96
PDE8A-203ENST00000394553 NEFLP07196 543 aa21.01■□□□□ 0.95
PDE8A-203ENST00000394553 BCANQ96GW7 911 aa20.99■□□□□ 0.95
PDE8A-203ENST00000394553 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
PDE8A-203ENST00000394553 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
PDE8A-203ENST00000394553 ARID3CA6NKF2 412 aa20.94■□□□□ 0.94
PDE8A-203ENST00000394553 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
PDE8A-203ENST00000394553 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.93
PDE8A-203ENST00000394553 HIRIP3Q9BW71 556 aaPredicted RBP20.88■□□□□ 0.93
PDE8A-203ENST00000394553 KANK4Q5T7N3 995 aaPredicted RBP20.85■□□□□ 0.93
PDE8A-203ENST00000394553 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
PDE8A-203ENST00000394553 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
PDE8A-203ENST00000394553 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
PDE8A-203ENST00000394553 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
PDE8A-203ENST00000394553 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
PDE8A-203ENST00000394553 RAPGEF2Q9Y4G8 1499 aa20.74■□□□□ 0.91
PDE8A-203ENST00000394553 ANP32CO43423 234 aa20.71■□□□□ 0.91
PDE8A-203ENST00000394553 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
PDE8A-203ENST00000394553 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
PDE8A-203ENST00000394553 CHIC2Q9UKJ5 165 aa20.66■□□□□ 0.9
PDE8A-203ENST00000394553 ERICH6Q7L0X2 663 aa20.65■□□□□ 0.9
PDE8A-203ENST00000394553 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
PDE8A-203ENST00000394553 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
PDE8A-203ENST00000394553 FKBP8Q14318 412 aa20.59■□□□□ 0.89
PDE8A-203ENST00000394553 MYT1Q01538 1121 aa20.57■□□□□ 0.88
PDE8A-203ENST00000394553 FBLN2P98095 1184 aa20.57■□□□□ 0.88
PDE8A-203ENST00000394553 CCNB3Q8WWL7 1395 aa20.56■□□□□ 0.88
PDE8A-203ENST00000394553 TONSLQ96HA7 1378 aa20.55■□□□□ 0.88
PDE8A-203ENST00000394553 CUX2O14529 1486 aa20.53■□□□□ 0.88
PDE8A-203ENST00000394553 MTUS2Q5JR59 1369 aa20.49■□□□□ 0.87
PDE8A-203ENST00000394553 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
PDE8A-203ENST00000394553 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
PDE8A-203ENST00000394553 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
PDE8A-203ENST00000394553 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
PDE8A-203ENST00000394553 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
PDE8A-203ENST00000394553 HNRNPUQ00839 825 aaKnown RBP eCLIP20.42■□□□□ 0.865e-7■□□□□ 9.2
PDE8A-203ENST00000394553 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
PDE8A-203ENST00000394553 KCNH8Q96L42 1107 aa20.4■□□□□ 0.86
PDE8A-203ENST00000394553 RAB3GAP2Q9H2M9 1393 aa20.39■□□□□ 0.85
PDE8A-203ENST00000394553 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms