RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
PDE8A-204ENST00000478717 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
PDE8A-204ENST00000478717 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
PDE8A-204ENST00000478717 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
PDE8A-204ENST00000478717 DCAF8L2P0C7V8 631 aa31.48■■■□□ 2.63
PDE8A-204ENST00000478717 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
PDE8A-204ENST00000478717 DCAF1Q9Y4B6 1507 aa30.71■■■□□ 2.51
PDE8A-204ENST00000478717 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
PDE8A-204ENST00000478717 HRCP23327 699 aa30.24■■■□□ 2.43
PDE8A-204ENST00000478717 MYO15BQ96JP2 1530 aa30.15■■■□□ 2.42
PDE8A-204ENST00000478717 SCRIBQ14160 1630 aa30■■■□□ 2.39
PDE8A-204ENST00000478717 PPARGC1BQ86YN6 1023 aaKnown RBP29.93■■■□□ 2.38
PDE8A-204ENST00000478717 ABCC9O60706 1549 aa29.92■■■□□ 2.38
PDE8A-204ENST00000478717 PCGF6Q9BYE7 350 aa29.76■■■□□ 2.36
PDE8A-204ENST00000478717 RSF1Q96T23 1441 aaPredicted RBP29.71■■■□□ 2.35
PDE8A-204ENST00000478717 NACADO15069 1562 aa29.58■■■□□ 2.33
PDE8A-204ENST00000478717 LOC105371045A0A1W2PR82 267 aa29.57■■■□□ 2.32
PDE8A-204ENST00000478717 CECR2Q9BXF3 1484 aa29.4■■■□□ 2.3
PDE8A-204ENST00000478717 RB1CC1Q8TDY2 1594 aa29.32■■■□□ 2.28
PDE8A-204ENST00000478717 MROH2BQ7Z745 1585 aa29.23■■■□□ 2.27
PDE8A-204ENST00000478717 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
PDE8A-204ENST00000478717 PELP1Q8IZL8 1130 aaKnown RBP29.13■■■□□ 2.25
PDE8A-204ENST00000478717 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
PDE8A-204ENST00000478717 WIZO95785 1651 aa29.05■■■□□ 2.24
PDE8A-204ENST00000478717 EHMT2Q96KQ7 1210 aa28.89■■■□□ 2.22
PDE8A-204ENST00000478717 SCAF1Q9H7N4 1312 aaKnown RBP28.83■■■□□ 2.21
PDE8A-204ENST00000478717 BAZ1AQ9NRL2 1556 aaPredicted RBP28.82■■■□□ 2.2
PDE8A-204ENST00000478717 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
PDE8A-204ENST00000478717 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
PDE8A-204ENST00000478717 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
PDE8A-204ENST00000478717 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
PDE8A-204ENST00000478717 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
PDE8A-204ENST00000478717 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
PDE8A-204ENST00000478717 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
PDE8A-204ENST00000478717 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
PDE8A-204ENST00000478717 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
PDE8A-204ENST00000478717 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
PDE8A-204ENST00000478717 ZEB1P37275 1124 aaPredicted RBP28.18■■■□□ 2.1
PDE8A-204ENST00000478717 SOGA1O94964 1423 aa28.12■■■□□ 2.09
PDE8A-204ENST00000478717 NEUROD1Q13562 356 aa28.01■■■□□ 2.07
PDE8A-204ENST00000478717 PEG3Q9GZU2 1588 aa28.01■■■□□ 2.07
PDE8A-204ENST00000478717 RUSC2Q8N2Y8 1516 aa28■■■□□ 2.07
PDE8A-204ENST00000478717 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
PDE8A-204ENST00000478717 ACIN1Q9UKV3 1341 aaKnown RBP27.96■■■□□ 2.07
PDE8A-204ENST00000478717 CSRNP3Q8WYN3 585 aa27.96■■■□□ 2.07
PDE8A-204ENST00000478717 MYT1Q01538 1121 aa27.91■■■□□ 2.06
PDE8A-204ENST00000478717 WRNQ14191 1432 aaPredicted RBP eCLIP27.9■■■□□ 2.06
PDE8A-204ENST00000478717 UBTFP17480 764 aaKnown RBP27.89■■■□□ 2.06
PDE8A-204ENST00000478717 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
PDE8A-204ENST00000478717 TTBK1Q5TCY1 1321 aaPredicted RBP27.88■■■□□ 2.05
PDE8A-204ENST00000478717 GTF3C3Q9Y5Q9 886 aa27.86■■■□□ 2.05
PDE8A-204ENST00000478717 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
PDE8A-204ENST00000478717 TNIKQ9UKE5 1360 aa27.8■■■□□ 2.04
PDE8A-204ENST00000478717 EEA1Q15075 1411 aa27.79■■■□□ 2.04
PDE8A-204ENST00000478717 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
PDE8A-204ENST00000478717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.7■■■□□ 2.02
PDE8A-204ENST00000478717 GOLGA3Q08378 1498 aa27.64■■■□□ 2.02
PDE8A-204ENST00000478717 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
PDE8A-204ENST00000478717 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
PDE8A-204ENST00000478717 CENPBP07199 599 aaPredicted RBP27.5■■□□□ 1.99
PDE8A-204ENST00000478717 RANGAP1P46060 587 aaPredicted RBP27.48■■□□□ 1.99
PDE8A-204ENST00000478717 DIEXFQ68CQ4 756 aaKnown RBP27.46■■□□□ 1.99
PDE8A-204ENST00000478717 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
PDE8A-204ENST00000478717 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
PDE8A-204ENST00000478717 KIF21BO75037 1637 aa27.4■■□□□ 1.98
PDE8A-204ENST00000478717 CLIP1P30622 1438 aa27.37■■□□□ 1.97
PDE8A-204ENST00000478717 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
PDE8A-204ENST00000478717 HMGXB3Q12766 1538 aa27.34■■□□□ 1.97
PDE8A-204ENST00000478717 YTHDC1Q96MU7 727 aaKnown RBP27.25■■□□□ 1.95
PDE8A-204ENST00000478717 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
PDE8A-204ENST00000478717 CUX1P39880 1505 aa27.2■■□□□ 1.95
PDE8A-204ENST00000478717 VPS8Q8N3P4 1428 aa27.19■■□□□ 1.94
PDE8A-204ENST00000478717 CFTRP13569 1480 aa27.18■■□□□ 1.94
PDE8A-204ENST00000478717 APLP2Q06481 763 aa27.18■■□□□ 1.94
PDE8A-204ENST00000478717 HNRNPUL2Q1KMD3 747 aaKnown RBP27.18■■□□□ 1.94
PDE8A-204ENST00000478717 PRXQ9BXM0 1461 aa27.11■■□□□ 1.93
PDE8A-204ENST00000478717 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
PDE8A-204ENST00000478717 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
PDE8A-204ENST00000478717 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
PDE8A-204ENST00000478717 ARAP1Q96P48 1450 aa26.92■■□□□ 1.9
PDE8A-204ENST00000478717 KANK4Q5T7N3 995 aaPredicted RBP26.9■■□□□ 1.9
PDE8A-204ENST00000478717 CUX2O14529 1486 aa26.86■■□□□ 1.89
PDE8A-204ENST00000478717 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
PDE8A-204ENST00000478717 IGF1RP08069 1367 aa26.83■■□□□ 1.89
PDE8A-204ENST00000478717 MIER1Q8N108 512 aa26.82■■□□□ 1.88
PDE8A-204ENST00000478717 ZNF316A6NFI3 1004 aaPredicted RBP26.81■■□□□ 1.88
PDE8A-204ENST00000478717 PRDM2Q13029 1718 aa26.76■■□□□ 1.88
PDE8A-204ENST00000478717 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
PDE8A-204ENST00000478717 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
PDE8A-204ENST00000478717 CARMIL1Q5VZK9 1371 aa26.7■■□□□ 1.87
PDE8A-204ENST00000478717 FANCD2Q9BXW9 1451 aa26.68■■□□□ 1.86
PDE8A-204ENST00000478717 NESP48681 1621 aa26.62■■□□□ 1.85
PDE8A-204ENST00000478717 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
PDE8A-204ENST00000478717 P3H3Q8IVL6 736 aa26.58■■□□□ 1.84
PDE8A-204ENST00000478717 ITGAEP38570 1179 aa26.57■■□□□ 1.84
PDE8A-204ENST00000478717 BCL11AQ9H165 835 aa26.53■■□□□ 1.84
PDE8A-204ENST00000478717 RRBP1Q9P2E9 1410 aaKnown RBP26.52■■□□□ 1.84
PDE8A-204ENST00000478717 DHX57Q6P158 1386 aaKnown RBP26.5■■□□□ 1.83
PDE8A-204ENST00000478717 CCNB3Q8WWL7 1395 aa26.48■■□□□ 1.83
PDE8A-204ENST00000478717 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms