RNA–Protein interactions for RNA: ENST00000602004.1

PAK4-212, Transcript of p21 (RAC1) activated kinase 4, humanhuman

TSL 4

Gene PAK4, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK4-212ENST00000602004 NISCHQ9Y2I1 1504 aa46.49■■■■■ 5.03
PAK4-212ENST00000602004 CCDC180Q9P1Z9 1646 aa41.7■■■■■ 4.27
PAK4-212ENST00000602004 ABCC9O60706 1549 aa41.63■■■■■ 4.25
PAK4-212ENST00000602004 RB1CC1Q8TDY2 1594 aa39.64■■■■□ 3.94
PAK4-212ENST00000602004 NACADO15069 1562 aa39.37■■■■□ 3.89
PAK4-212ENST00000602004 DCAF8L2P0C7V8 631 aa39.23■■■■□ 3.87
PAK4-212ENST00000602004 DNAJC5BQ9UF47 199 aa38.86■■■■□ 3.81
PAK4-212ENST00000602004 MYO15BQ96JP2 1530 aa38.81■■■■□ 3.8
PAK4-212ENST00000602004 UNC13AQ9UPW8 1703 aa38.79■■■■□ 3.8
PAK4-212ENST00000602004 PABPN1Q86U42 306 aaKnown RBP eCLIP38.74■■■■□ 3.79
PAK4-212ENST00000602004 ZCCHC6Q5VYS8 1495 aaKnown RBP38.57■■■■□ 3.76
PAK4-212ENST00000602004 BICRAQ9NZM4 1560 aa38.46■■■■□ 3.75
PAK4-212ENST00000602004 DCAF1Q9Y4B6 1507 aa38.37■■■■□ 3.73
PAK4-212ENST00000602004 SCRIBQ14160 1630 aa38.07■■■■□ 3.68
PAK4-212ENST00000602004 SHROOM4Q9ULL8 1493 aa37.94■■■■□ 3.66
PAK4-212ENST00000602004 CC2D2AQ9P2K1 1620 aa37.6■■■■□ 3.61
PAK4-212ENST00000602004 EIF4G1Q04637 1599 aaKnown RBP37.54■■■■□ 3.6
PAK4-212ENST00000602004 CECR2Q9BXF3 1484 aa37.46■■■■□ 3.59
PAK4-212ENST00000602004 NCAPD3P42695 1498 aa36.31■■■■□ 3.4
PAK4-212ENST00000602004 SMARCA4P51532 1647 aa36.28■■■■□ 3.4
PAK4-212ENST00000602004 ATAD2BQ9ULI0 1458 aa36.24■■■■□ 3.39
PAK4-212ENST00000602004 SMARCA2P51531 1590 aa36.17■■■■□ 3.38
PAK4-212ENST00000602004 HMGXB3Q12766 1538 aa36.1■■■■□ 3.37
PAK4-212ENST00000602004 BAZ1AQ9NRL2 1556 aaPredicted RBP36.1■■■■□ 3.37
PAK4-212ENST00000602004 ERCC6Q03468 1493 aa35.95■■■■□ 3.35
PAK4-212ENST00000602004 BAZ1BQ9UIG0 1483 aaKnown RBP35.95■■■■□ 3.35
PAK4-212ENST00000602004 PEG3Q9GZU2 1588 aa35.88■■■■□ 3.33
PAK4-212ENST00000602004 MROH2BQ7Z745 1585 aa35.84■■■■□ 3.33
PAK4-212ENST00000602004 CUX2O14529 1486 aa35.8■■■■□ 3.32
PAK4-212ENST00000602004 NESP48681 1621 aa35.78■■■■□ 3.32
PAK4-212ENST00000602004 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
PAK4-212ENST00000602004 LAMC3Q9Y6N6 1575 aa35.53■■■■□ 3.28
PAK4-212ENST00000602004 WIZO95785 1651 aa35.44■■■■□ 3.26
PAK4-212ENST00000602004 THOC2Q8NI27 1593 aaKnown RBP35.41■■■■□ 3.26
PAK4-212ENST00000602004 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
PAK4-212ENST00000602004 PDS5BQ9NTI5 1447 aa35.31■■■■□ 3.24
PAK4-212ENST00000602004 CADPSQ9ULU8 1353 aa35.23■■■■□ 3.23
PAK4-212ENST00000602004 RSF1Q96T23 1441 aaPredicted RBP35.11■■■■□ 3.21
PAK4-212ENST00000602004 MRC2Q9UBG0 1479 aa35.03■■■■□ 3.2
PAK4-212ENST00000602004 TOP2AP11388 1531 aaKnown RBP34.99■■■■□ 3.19
PAK4-212ENST00000602004 WDR62O43379 1518 aa34.92■■■■□ 3.18
PAK4-212ENST00000602004 CEP164Q9UPV0 1460 aa34.92■■■■□ 3.18
PAK4-212ENST00000602004 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
PAK4-212ENST00000602004 CFTRP13569 1480 aa34.85■■■■□ 3.17
PAK4-212ENST00000602004 PRDM2Q13029 1718 aa34.61■■■■□ 3.13
PAK4-212ENST00000602004 URB2Q14146 1524 aaKnown RBP34.58■■■■□ 3.13
PAK4-212ENST00000602004 CCDC88BA6NC98 1476 aa34.56■■■■□ 3.12
PAK4-212ENST00000602004 TOPBP1Q92547 1522 aa34.22■■■■□ 3.07
PAK4-212ENST00000602004 TRIM41Q8WV44 630 aa34.19■■■■□ 3.06
PAK4-212ENST00000602004 IFT140Q96RY7 1462 aa34.19■■■■□ 3.06
PAK4-212ENST00000602004 OSCARQ8IYS5 282 aa34.14■■■■□ 3.06
PAK4-212ENST00000602004 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
PAK4-212ENST00000602004 DNMBPQ6XZF7 1577 aa34.12■■■■□ 3.05
PAK4-212ENST00000602004 ABCC8Q09428 1581 aa34.11■■■■□ 3.05
PAK4-212ENST00000602004 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
PAK4-212ENST00000602004 TARBP1Q13395 1621 aaKnown RBP33.9■■■■□ 3.02
PAK4-212ENST00000602004 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
PAK4-212ENST00000602004 AQRO60306 1485 aaKnown RBP eCLIP33.83■■■■□ 3.011e-6■■■■□ 19.7
PAK4-212ENST00000602004 RAD54L2Q9Y4B4 1467 aa33.76■■■■□ 3
PAK4-212ENST00000602004 RIMBP3CA6NJZ7 1639 aa33.76■■■■□ 3
PAK4-212ENST00000602004 RIMBP3BA6NNM3 1639 aa33.76■■■■□ 3
PAK4-212ENST00000602004 RIMBP3Q9UFD9 1639 aa33.76■■■■□ 3
PAK4-212ENST00000602004 CHD1O14646 1710 aa33.74■■■□□ 2.99
PAK4-212ENST00000602004 FGD5Q6ZNL6 1462 aa33.7■■■□□ 2.99
PAK4-212ENST00000602004 SOGA1O94964 1423 aa33.7■■■□□ 2.98
PAK4-212ENST00000602004 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
PAK4-212ENST00000602004 CUX1P39880 1505 aa33.68■■■□□ 2.98
PAK4-212ENST00000602004 ARHGEF11O15085 1522 aa33.66■■■□□ 2.98
PAK4-212ENST00000602004 TDRD9Q8NDG6 1382 aaKnown RBP33.63■■■□□ 2.97
PAK4-212ENST00000602004 FBLN2P98095 1184 aa33.62■■■□□ 2.97
PAK4-212ENST00000602004 WDR97A6NE52 1622 aa33.56■■■□□ 2.96
PAK4-212ENST00000602004 SNAPC4Q5SXM2 1469 aa33.53■■■□□ 2.96
PAK4-212ENST00000602004 GRIN2BQ13224 1484 aa33.42■■■□□ 2.94
PAK4-212ENST00000602004 MAGI1Q96QZ7 1491 aaPredicted RBP33.41■■■□□ 2.94
PAK4-212ENST00000602004 CYB5RLQ6IPT4 315 aa33.37■■■□□ 2.93
PAK4-212ENST00000602004 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
PAK4-212ENST00000602004 CHMP7Q8WUX9 453 aaPredicted RBP33.35■■■□□ 2.93
PAK4-212ENST00000602004 ARAP1Q96P48 1450 aa33.33■■■□□ 2.93
PAK4-212ENST00000602004 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
PAK4-212ENST00000602004 SYNJ1O43426 1573 aa33.31■■■□□ 2.92
PAK4-212ENST00000602004 CLASP1Q7Z460 1538 aa33.3■■■□□ 2.92
PAK4-212ENST00000602004 SYNJ2O15056 1496 aa33.3■■■□□ 2.92
PAK4-212ENST00000602004 ABCA10Q8WWZ4 1543 aa33.29■■■□□ 2.92
PAK4-212ENST00000602004 ABCA5Q8WWZ7 1642 aa33.27■■■□□ 2.92
PAK4-212ENST00000602004 WRNQ14191 1432 aaPredicted RBP eCLIP33.18■■■□□ 2.9
PAK4-212ENST00000602004 BIVM-ERCC5R4GMW8 1640 aa33.17■■■□□ 2.9
PAK4-212ENST00000602004 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
PAK4-212ENST00000602004 ADAMTS12P58397 1594 aa33.03■■■□□ 2.88
PAK4-212ENST00000602004 GRIN2AQ12879 1464 aa33■■■□□ 2.87
PAK4-212ENST00000602004 TRHP20396 242 aaPredicted RBP33■■■□□ 2.87
PAK4-212ENST00000602004 CEP170Q5SW79 1584 aa32.89■■■□□ 2.86
PAK4-212ENST00000602004 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
PAK4-212ENST00000602004 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
PAK4-212ENST00000602004 NUP160Q12769 1436 aa32.85■■■□□ 2.85
PAK4-212ENST00000602004 ERCC6L2Q5T890 1561 aa32.81■■■□□ 2.84
PAK4-212ENST00000602004 SHROOM2Q13796 1616 aa32.72■■■□□ 2.83
PAK4-212ENST00000602004 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
PAK4-212ENST00000602004 PRG4Q92954 1404 aaPredicted RBP32.55■■■□□ 2.8
PAK4-212ENST00000602004 KIF27Q86VH2 1401 aa32.51■■■□□ 2.79
PAK4-212ENST00000602004 JPH4Q96JJ6 628 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms