Protein–RNA interactions for Protein: Q92947

GCDH, Glutaryl-CoA dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 438 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCDHQ92947 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.18■■□□□ 1.62
GCDHQ92947 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
GCDHQ92947 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.11■■□□□ 1.61
GCDHQ92947 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
GCDHQ92947 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.09■■□□□ 1.61
GCDHQ92947 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
GCDHQ92947 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
GCDHQ92947 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.08■■□□□ 1.61
GCDHQ92947 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
GCDHQ92947 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.06■■□□□ 1.6
GCDHQ92947 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
GCDHQ92947 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
GCDHQ92947 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
GCDHQ92947 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
GCDHQ92947 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.99■■□□□ 1.59
GCDHQ92947 ZNRF2P1-201ENST00000441407 443 ntBASIC24.98■■□□□ 1.59
GCDHQ92947 AC006077.2-201ENST00000623591 457 ntBASIC24.97■■□□□ 1.59
GCDHQ92947 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
GCDHQ92947 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.94■■□□□ 1.58
GCDHQ92947 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
GCDHQ92947 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.89■■□□□ 1.58
GCDHQ92947 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.89■■□□□ 1.57
GCDHQ92947 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
GCDHQ92947 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
GCDHQ92947 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
GCDHQ92947 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.84■■□□□ 1.57
GCDHQ92947 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
GCDHQ92947 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
GCDHQ92947 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.56
GCDHQ92947 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
GCDHQ92947 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
GCDHQ92947 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
GCDHQ92947 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
GCDHQ92947 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
GCDHQ92947 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.76■■□□□ 1.55
GCDHQ92947 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
GCDHQ92947 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
GCDHQ92947 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
GCDHQ92947 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
GCDHQ92947 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
GCDHQ92947 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
GCDHQ92947 AC145285.7-201ENST00000614819 1539 ntBASIC24.7■■□□□ 1.54
GCDHQ92947 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
GCDHQ92947 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
GCDHQ92947 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
GCDHQ92947 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
GCDHQ92947 AC015813.7-201ENST00000623294 581 ntBASIC24.66■■□□□ 1.54
GCDHQ92947 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
GCDHQ92947 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
GCDHQ92947 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GCDHQ92947 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.65■■□□□ 1.54
GCDHQ92947 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
GCDHQ92947 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
GCDHQ92947 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
GCDHQ92947 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
GCDHQ92947 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
GCDHQ92947 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
GCDHQ92947 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
GCDHQ92947 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.52■■□□□ 1.52
GCDHQ92947 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
GCDHQ92947 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
GCDHQ92947 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
GCDHQ92947 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
GCDHQ92947 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.47■■□□□ 1.51
GCDHQ92947 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
GCDHQ92947 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
GCDHQ92947 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
GCDHQ92947 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
GCDHQ92947 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
GCDHQ92947 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
GCDHQ92947 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GCDHQ92947 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GCDHQ92947 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GCDHQ92947 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
GCDHQ92947 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
GCDHQ92947 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.38■■□□□ 1.49
GCDHQ92947 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.36■■□□□ 1.49
GCDHQ92947 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
GCDHQ92947 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
GCDHQ92947 AP002365.1-201ENST00000603448 772 ntBASIC24.35■■□□□ 1.49
GCDHQ92947 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
GCDHQ92947 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GCDHQ92947 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
GCDHQ92947 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
GCDHQ92947 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.31■■□□□ 1.48
GCDHQ92947 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
GCDHQ92947 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GCDHQ92947 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
GCDHQ92947 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
GCDHQ92947 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
GCDHQ92947 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
GCDHQ92947 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.22■■□□□ 1.47
GCDHQ92947 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
GCDHQ92947 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
GCDHQ92947 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
GCDHQ92947 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
GCDHQ92947 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
GCDHQ92947 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
GCDHQ92947 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
GCDHQ92947 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 365.1 ms