RNA–Protein interactions for RNA: ENST00000253023.7

UBE2M-201, Transcript of ubiquitin conjugating enzyme E2 M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2M, Length 1,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2M-201ENST00000253023 NISCHQ9Y2I1 1504 aa72.35■■■■■ 9.17
UBE2M-201ENST00000253023 CCDC180Q9P1Z9 1646 aa63.8■■■■■ 7.8
UBE2M-201ENST00000253023 ABCC9O60706 1549 aa61.82■■■■■ 7.49
UBE2M-201ENST00000253023 ZCCHC6Q5VYS8 1495 aaKnown RBP60.44■■■■■ 7.27
UBE2M-201ENST00000253023 DCAF8L2P0C7V8 631 aa60.28■■■■■ 7.24
UBE2M-201ENST00000253023 DCAF1Q9Y4B6 1507 aa59.83■■■■■ 7.17
UBE2M-201ENST00000253023 NACADO15069 1562 aa59.81■■■■■ 7.17
UBE2M-201ENST00000253023 MYO15BQ96JP2 1530 aa59.7■■■■■ 7.15
UBE2M-201ENST00000253023 RB1CC1Q8TDY2 1594 aa59.66■■■■■ 7.14
UBE2M-201ENST00000253023 SCRIBQ14160 1630 aa58.42■■■■■ 6.94
UBE2M-201ENST00000253023 UNC13AQ9UPW8 1703 aa58.37■■■■■ 6.93
UBE2M-201ENST00000253023 PABPN1Q86U42 306 aaKnown RBP eCLIP57.91■■■■■ 6.86
UBE2M-201ENST00000253023 SHROOM4Q9ULL8 1493 aa57.9■■■■■ 6.86
UBE2M-201ENST00000253023 BICRAQ9NZM4 1560 aa57.86■■■■■ 6.85
UBE2M-201ENST00000253023 CECR2Q9BXF3 1484 aa56.31■■■■■ 6.61
UBE2M-201ENST00000253023 EIF4G1Q04637 1599 aaKnown RBP56.28■■■■■ 6.6
UBE2M-201ENST00000253023 DNAJC5BQ9UF47 199 aa56.13■■■■■ 6.58
UBE2M-201ENST00000253023 BAZ1AQ9NRL2 1556 aaPredicted RBP55.99■■■■■ 6.55
UBE2M-201ENST00000253023 SMARCA4P51532 1647 aa55.92■■■■■ 6.54
UBE2M-201ENST00000253023 CC2D2AQ9P2K1 1620 aa55.9■■■■■ 6.54
UBE2M-201ENST00000253023 MROH2BQ7Z745 1585 aa55.81■■■■■ 6.52
UBE2M-201ENST00000253023 RSF1Q96T23 1441 aaPredicted RBP55.52■■■■■ 6.48
UBE2M-201ENST00000253023 ATAD2BQ9ULI0 1458 aa55.41■■■■■ 6.46
UBE2M-201ENST00000253023 SMARCA2P51531 1590 aa55.34■■■■■ 6.45
UBE2M-201ENST00000253023 PEG3Q9GZU2 1588 aa55.3■■■■■ 6.44
UBE2M-201ENST00000253023 WIZO95785 1651 aa55.25■■■■■ 6.43
UBE2M-201ENST00000253023 NCAPD3P42695 1498 aa55.21■■■■■ 6.43
UBE2M-201ENST00000253023 BAZ1BQ9UIG0 1483 aaKnown RBP55.01■■■■■ 6.4
UBE2M-201ENST00000253023 HMGXB3Q12766 1538 aa54.98■■■■■ 6.39
UBE2M-201ENST00000253023 SUPT5HO00267 1087 aaKnown RBP54.97■■■■■ 6.39
UBE2M-201ENST00000253023 TOP2AP11388 1531 aaKnown RBP54.67■■■■■ 6.34
UBE2M-201ENST00000253023 CCDC88BA6NC98 1476 aa54.09■■■■■ 6.25
UBE2M-201ENST00000253023 NESP48681 1621 aa53.7■■■■■ 6.19
UBE2M-201ENST00000253023 CADPSQ9ULU8 1353 aa53.69■■■■■ 6.19
UBE2M-201ENST00000253023 LAMC3Q9Y6N6 1575 aa53.57■■■■■ 6.17
UBE2M-201ENST00000253023 CFTRP13569 1480 aa53.54■■■■■ 6.16
UBE2M-201ENST00000253023 PDS5BQ9NTI5 1447 aa53.24■■■■■ 6.11
UBE2M-201ENST00000253023 ERCC6Q03468 1493 aa53.21■■■■■ 6.11
UBE2M-201ENST00000253023 PRDM2Q13029 1718 aa53.11■■■■■ 6.09
UBE2M-201ENST00000253023 FANCD2Q9BXW9 1451 aa53.08■■■■■ 6.09
UBE2M-201ENST00000253023 KIF21AQ7Z4S6 1674 aa53.06■■■■■ 6.08
UBE2M-201ENST00000253023 CEP164Q9UPV0 1460 aa52.9■■■■■ 6.06
UBE2M-201ENST00000253023 THOC2Q8NI27 1593 aaKnown RBP52.68■■■■■ 6.02
UBE2M-201ENST00000253023 MRC2Q9UBG0 1479 aa52.62■■■■■ 6.01
UBE2M-201ENST00000253023 URB2Q14146 1524 aaKnown RBP52.48■■■■■ 5.99
UBE2M-201ENST00000253023 ABCC8Q09428 1581 aa52.42■■■■■ 5.98
UBE2M-201ENST00000253023 WDR62O43379 1518 aa52.41■■■■■ 5.98
UBE2M-201ENST00000253023 TOPBP1Q92547 1522 aa52.32■■■■■ 5.97
UBE2M-201ENST00000253023 WRNQ14191 1432 aaPredicted RBP eCLIP52.32■■■■■ 5.97
UBE2M-201ENST00000253023 DNMBPQ6XZF7 1577 aa52.31■■■■■ 5.96
UBE2M-201ENST00000253023 CUX2O14529 1486 aa52.3■■■■■ 5.96
UBE2M-201ENST00000253023 CUX1P39880 1505 aa52.29■■■■■ 5.96
UBE2M-201ENST00000253023 SYNJ1O43426 1573 aa52.12■■■■■ 5.93
UBE2M-201ENST00000253023 TOP2BQ02880 1626 aa52.05■■■■■ 5.92
UBE2M-201ENST00000253023 BIVM-ERCC5R4GMW8 1640 aa52.01■■■■■ 5.92
UBE2M-201ENST00000253023 FGD5Q6ZNL6 1462 aa51.97■■■■■ 5.91
UBE2M-201ENST00000253023 POLA1P09884 1462 aaPredicted RBP51.95■■■■■ 5.91
UBE2M-201ENST00000253023 TRIM41Q8WV44 630 aa51.84■■■■■ 5.89
UBE2M-201ENST00000253023 CHIC1Q5VXU3 224 aa51.82■■■■■ 5.89
UBE2M-201ENST00000253023 SOGA1O94964 1423 aa51.79■■■■■ 5.88
UBE2M-201ENST00000253023 RAD54L2Q9Y4B4 1467 aa51.77■■■■■ 5.88
UBE2M-201ENST00000253023 IFT140Q96RY7 1462 aa51.75■■■■■ 5.87
UBE2M-201ENST00000253023 TARBP1Q13395 1621 aaKnown RBP51.65■■■■■ 5.86
UBE2M-201ENST00000253023 ABCA10Q8WWZ4 1543 aa51.48■■■■■ 5.83
UBE2M-201ENST00000253023 ZNF608Q9ULD9 1512 aaPredicted RBP51.48■■■■■ 5.83
UBE2M-201ENST00000253023 TDRD9Q8NDG6 1382 aaKnown RBP51.42■■■■■ 5.82
UBE2M-201ENST00000253023 WDR97A6NE52 1622 aa51.4■■■■■ 5.82
UBE2M-201ENST00000253023 AQRO60306 1485 aaKnown RBP eCLIP51.34■■■■■ 5.811e-6■■■■■ 29.4
UBE2M-201ENST00000253023 EIF4G3O43432 1585 aaKnown RBP51.28■■■■■ 5.8
UBE2M-201ENST00000253023 GAPVD1Q14C86 1478 aa51.19■■■■■ 5.79
UBE2M-201ENST00000253023 ABCA5Q8WWZ7 1642 aa51.16■■■■■ 5.78
UBE2M-201ENST00000253023 KIF27Q86VH2 1401 aa51.15■■■■■ 5.78
UBE2M-201ENST00000253023 RUSC2Q8N2Y8 1516 aa51.03■■■■■ 5.76
UBE2M-201ENST00000253023 GRIN2BQ13224 1484 aa51.03■■■■■ 5.76
UBE2M-201ENST00000253023 PBRM1Q86U86 1689 aa50.94■■■■■ 5.75
UBE2M-201ENST00000253023 ERICH3Q5RHP9 1530 aa50.86■■■■■ 5.73
UBE2M-201ENST00000253023 IGF1RP08069 1367 aa50.86■■■■■ 5.73
UBE2M-201ENST00000253023 SNAPC4Q5SXM2 1469 aa50.84■■■■■ 5.73
UBE2M-201ENST00000253023 FAM9AQ8IZU1 332 aaPredicted RBP50.81■■■■■ 5.72
UBE2M-201ENST00000253023 MAGI1Q96QZ7 1491 aaPredicted RBP50.76■■■■■ 5.72
UBE2M-201ENST00000253023 EEA1Q15075 1411 aa50.76■■■■■ 5.72
UBE2M-201ENST00000253023 CSRNP3Q8WYN3 585 aa50.67■■■■■ 5.7
UBE2M-201ENST00000253023 FBLN2P98095 1184 aa50.62■■■■■ 5.69
UBE2M-201ENST00000253023 FHAD1B1AJZ9 1412 aa50.61■■■■■ 5.69
UBE2M-201ENST00000253023 ADAMTS12P58397 1594 aa50.61■■■■■ 5.69
UBE2M-201ENST00000253023 CHMP7Q8WUX9 453 aaPredicted RBP50.58■■■■■ 5.69
UBE2M-201ENST00000253023 CARMIL1Q5VZK9 1371 aa50.58■■■■■ 5.69
UBE2M-201ENST00000253023 SYNJ2O15056 1496 aa50.57■■■■■ 5.69
UBE2M-201ENST00000253023 CUL7Q14999 1698 aa50.56■■■■■ 5.68
UBE2M-201ENST00000253023 CHD1O14646 1710 aa50.51■■■■■ 5.68
UBE2M-201ENST00000253023 PRXQ9BXM0 1461 aa50.39■■■■■ 5.66
UBE2M-201ENST00000253023 GRIN2AQ12879 1464 aa50.37■■■■■ 5.65
UBE2M-201ENST00000253023 RAPGEF2Q9Y4G8 1499 aa50.35■■■■■ 5.65
UBE2M-201ENST00000253023 OSCARQ8IYS5 282 aa50.3■■■■■ 5.64
UBE2M-201ENST00000253023 KIF21BO75037 1637 aa50.14■■■■■ 5.62
UBE2M-201ENST00000253023 EHMT2Q96KQ7 1210 aa50.13■■■■■ 5.62
UBE2M-201ENST00000253023 NUP160Q12769 1436 aa50.09■■■■■ 5.61
UBE2M-201ENST00000253023 CEP170Q5SW79 1584 aa50.07■■■■■ 5.61
UBE2M-201ENST00000253023 GOLGA3Q08378 1498 aa49.97■■■■■ 5.59
UBE2M-201ENST00000253023 DNAJC5Q9H3Z4 198 aa49.95■■■■■ 5.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms