Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST3H2BBQ8N257 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.18■■□□□ 1.14
HIST3H2BBQ8N257 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.18■■□□□ 1.14
HIST3H2BBQ8N257 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
HIST3H2BBQ8N257 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
HIST3H2BBQ8N257 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HIST3H2BBQ8N257 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HIST3H2BBQ8N257 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST3H2BBQ8N257 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
HIST3H2BBQ8N257 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.13■■□□□ 1.13
HIST3H2BBQ8N257 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.13■■□□□ 1.13
HIST3H2BBQ8N257 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HIST3H2BBQ8N257 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HIST3H2BBQ8N257 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
HIST3H2BBQ8N257 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
HIST3H2BBQ8N257 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HIST3H2BBQ8N257 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
HIST3H2BBQ8N257 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HIST3H2BBQ8N257 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HIST3H2BBQ8N257 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HIST3H2BBQ8N257 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.03■■□□□ 1.12
HIST3H2BBQ8N257 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HIST3H2BBQ8N257 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HIST3H2BBQ8N257 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HIST3H2BBQ8N257 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
HIST3H2BBQ8N257 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIST3H2BBQ8N257 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST3H2BBQ8N257 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST3H2BBQ8N257 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST3H2BBQ8N257 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST3H2BBQ8N257 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST3H2BBQ8N257 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HIST3H2BBQ8N257 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIST3H2BBQ8N257 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HIST3H2BBQ8N257 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST3H2BBQ8N257 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST3H2BBQ8N257 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
HIST3H2BBQ8N257 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.85■■□□□ 1.09
HIST3H2BBQ8N257 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST3H2BBQ8N257 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST3H2BBQ8N257 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HIST3H2BBQ8N257 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST3H2BBQ8N257 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST3H2BBQ8N257 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST3H2BBQ8N257 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HIST3H2BBQ8N257 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST3H2BBQ8N257 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST3H2BBQ8N257 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST3H2BBQ8N257 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST3H2BBQ8N257 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST3H2BBQ8N257 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST3H2BBQ8N257 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HIST3H2BBQ8N257 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIST3H2BBQ8N257 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST3H2BBQ8N257 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HIST3H2BBQ8N257 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.71■■□□□ 1.07
HIST3H2BBQ8N257 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
HIST3H2BBQ8N257 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST3H2BBQ8N257 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST3H2BBQ8N257 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HIST3H2BBQ8N257 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
HIST3H2BBQ8N257 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HIST3H2BBQ8N257 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIST3H2BBQ8N257 ABCB10P3-201ENST00000561950 2166 ntBASIC21.6■■□□□ 1.05
HIST3H2BBQ8N257 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIST3H2BBQ8N257 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HIST3H2BBQ8N257 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
HIST3H2BBQ8N257 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIST3H2BBQ8N257 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.56■■□□□ 1.04
HIST3H2BBQ8N257 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HIST3H2BBQ8N257 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.54■■□□□ 1.04
HIST3H2BBQ8N257 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HIST3H2BBQ8N257 AC135731.1-201ENST00000569415 2548 ntBASIC21.53■■□□□ 1.04
HIST3H2BBQ8N257 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST3H2BBQ8N257 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST3H2BBQ8N257 ABCB10P1-201ENST00000614297 2181 ntBASIC21.51■■□□□ 1.03
HIST3H2BBQ8N257 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST3H2BBQ8N257 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HIST3H2BBQ8N257 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HIST3H2BBQ8N257 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST3H2BBQ8N257 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HIST3H2BBQ8N257 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST3H2BBQ8N257 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
HIST3H2BBQ8N257 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST3H2BBQ8N257 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST3H2BBQ8N257 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HIST3H2BBQ8N257 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.44■■□□□ 1.02
HIST3H2BBQ8N257 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST3H2BBQ8N257 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST3H2BBQ8N257 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.43■■□□□ 1.02
HIST3H2BBQ8N257 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST3H2BBQ8N257 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST3H2BBQ8N257 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HIST3H2BBQ8N257 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIST3H2BBQ8N257 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.39■■□□□ 1.01
HIST3H2BBQ8N257 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST3H2BBQ8N257 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.36■■□□□ 1.01
HIST3H2BBQ8N257 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST3H2BBQ8N257 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HIST3H2BBQ8N257 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms