RNA–Protein interactions for RNA: ENST00000616824.1

FAM220A-206, Transcript of family with sequence similarity 220 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM220A, Length 2,211 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220A-206ENST00000616824 NISCHQ9Y2I1 1504 aa53.14■■■■■ 6.1
FAM220A-206ENST00000616824 CCDC180Q9P1Z9 1646 aa46.09■■■■■ 4.97
FAM220A-206ENST00000616824 ZCCHC6Q5VYS8 1495 aaKnown RBP44.59■■■■■ 4.73
FAM220A-206ENST00000616824 DCAF8L2P0C7V8 631 aa44.36■■■■■ 4.69
FAM220A-206ENST00000616824 ABCC9O60706 1549 aa44■■■■■ 4.63
FAM220A-206ENST00000616824 SHROOM4Q9ULL8 1493 aa43.78■■■■■ 4.6
FAM220A-206ENST00000616824 DCAF1Q9Y4B6 1507 aa43.73■■■■■ 4.59
FAM220A-206ENST00000616824 MYO15BQ96JP2 1530 aa43.16■■■■■ 4.5
FAM220A-206ENST00000616824 NACADO15069 1562 aa43.02■■■■■ 4.48
FAM220A-206ENST00000616824 SCRIBQ14160 1630 aa42.71■■■■■ 4.43
FAM220A-206ENST00000616824 RB1CC1Q8TDY2 1594 aa42.68■■■■■ 4.42
FAM220A-206ENST00000616824 SUPT5HO00267 1087 aaKnown RBP42.14■■■■■ 4.34
FAM220A-206ENST00000616824 UNC13AQ9UPW8 1703 aa41.86■■■■■ 4.29
FAM220A-206ENST00000616824 PABPN1Q86U42 306 aaKnown RBP eCLIP41.67■■■■■ 4.26
FAM220A-206ENST00000616824 BICRAQ9NZM4 1560 aa41.49■■■■■ 4.23
FAM220A-206ENST00000616824 CECR2Q9BXF3 1484 aa41.46■■■■■ 4.23
FAM220A-206ENST00000616824 RSF1Q96T23 1441 aaPredicted RBP41.32■■■■■ 4.21
FAM220A-206ENST00000616824 MROH2BQ7Z745 1585 aa41.16■■■■■ 4.18
FAM220A-206ENST00000616824 BAZ1AQ9NRL2 1556 aaPredicted RBP40.97■■■■■ 4.15
FAM220A-206ENST00000616824 WIZO95785 1651 aa40.82■■■■■ 4.12
FAM220A-206ENST00000616824 SMARCA4P51532 1647 aa40.81■■■■■ 4.12
FAM220A-206ENST00000616824 HRCP23327 699 aa40.73■■■■■ 4.11
FAM220A-206ENST00000616824 TOP2AP11388 1531 aaKnown RBP40.25■■■■■ 4.03
FAM220A-206ENST00000616824 EIF4G1Q04637 1599 aaKnown RBP40.23■■■■■ 4.03
FAM220A-206ENST00000616824 CHIC1Q5VXU3 224 aa40.21■■■■■ 4.03
FAM220A-206ENST00000616824 ATAD2BQ9ULI0 1458 aa40.2■■■■■ 4.03
FAM220A-206ENST00000616824 PEG3Q9GZU2 1588 aa40.19■■■■■ 4.02
FAM220A-206ENST00000616824 SMARCA2P51531 1590 aa40.06■■■■■ 4
FAM220A-206ENST00000616824 CCDC88BA6NC98 1476 aa39.99■■■■□ 3.99
FAM220A-206ENST00000616824 BAZ1BQ9UIG0 1483 aaKnown RBP39.98■■■■□ 3.99
FAM220A-206ENST00000616824 NCAPD3P42695 1498 aa39.79■■■■□ 3.96
FAM220A-206ENST00000616824 CC2D2AQ9P2K1 1620 aa39.67■■■■□ 3.94
FAM220A-206ENST00000616824 PCGF6Q9BYE7 350 aa39.66■■■■□ 3.94
FAM220A-206ENST00000616824 HMGXB3Q12766 1538 aa39.64■■■■□ 3.94
FAM220A-206ENST00000616824 TRIM41Q8WV44 630 aa39.48■■■■□ 3.91
FAM220A-206ENST00000616824 PELP1Q8IZL8 1130 aaKnown RBP39.48■■■■□ 3.91
FAM220A-206ENST00000616824 PPARGC1BQ86YN6 1023 aaKnown RBP39.42■■■■□ 3.9
FAM220A-206ENST00000616824 ABCC8Q09428 1581 aa39.23■■■■□ 3.87
FAM220A-206ENST00000616824 DNAJC5BQ9UF47 199 aa39.05■■■■□ 3.84
FAM220A-206ENST00000616824 FAM9AQ8IZU1 332 aaPredicted RBP38.97■■■■□ 3.83
FAM220A-206ENST00000616824 CFTRP13569 1480 aa38.94■■■■□ 3.82
FAM220A-206ENST00000616824 WRNQ14191 1432 aaPredicted RBP eCLIP38.88■■■■□ 3.81
FAM220A-206ENST00000616824 CADPSQ9ULU8 1353 aa38.86■■■■□ 3.81
FAM220A-206ENST00000616824 LOC105371045A0A1W2PR82 267 aa38.86■■■■□ 3.81
FAM220A-206ENST00000616824 TRIM26Q12899 539 aaPredicted RBP38.77■■■■□ 3.8
FAM220A-206ENST00000616824 SYNJ1O43426 1573 aa38.71■■■■□ 3.79
FAM220A-206ENST00000616824 ZEB1P37275 1124 aaPredicted RBP38.65■■■■□ 3.78
FAM220A-206ENST00000616824 NESP48681 1621 aa38.65■■■■□ 3.78
FAM220A-206ENST00000616824 EHMT2Q96KQ7 1210 aa38.59■■■■□ 3.77
FAM220A-206ENST00000616824 SOGA1O94964 1423 aa38.54■■■■□ 3.76
FAM220A-206ENST00000616824 PRDM2Q13029 1718 aa38.52■■■■□ 3.76
FAM220A-206ENST00000616824 TOP2BQ02880 1626 aa38.45■■■■□ 3.75
FAM220A-206ENST00000616824 CUX1P39880 1505 aa38.44■■■■□ 3.74
FAM220A-206ENST00000616824 FANCD2Q9BXW9 1451 aa38.44■■■■□ 3.74
FAM220A-206ENST00000616824 RUSC2Q8N2Y8 1516 aa38.42■■■■□ 3.74
FAM220A-206ENST00000616824 LAMC3Q9Y6N6 1575 aa38.37■■■■□ 3.73
FAM220A-206ENST00000616824 BIVM-ERCC5R4GMW8 1640 aa38.35■■■■□ 3.73
FAM220A-206ENST00000616824 SCAF1Q9H7N4 1312 aaKnown RBP38.27■■■■□ 3.72
FAM220A-206ENST00000616824 CSRNP3Q8WYN3 585 aa38.22■■■■□ 3.71
FAM220A-206ENST00000616824 PDS5BQ9NTI5 1447 aa38.17■■■■□ 3.7
FAM220A-206ENST00000616824 EEA1Q15075 1411 aa38.16■■■■□ 3.7
FAM220A-206ENST00000616824 CEP164Q9UPV0 1460 aa38.14■■■■□ 3.7
FAM220A-206ENST00000616824 MYT1Q01538 1121 aa38.06■■■■□ 3.68
FAM220A-206ENST00000616824 FGD5Q6ZNL6 1462 aa38.03■■■■□ 3.68
FAM220A-206ENST00000616824 KIF21AQ7Z4S6 1674 aa38.01■■■■□ 3.67
FAM220A-206ENST00000616824 TOPBP1Q92547 1522 aa38■■■■□ 3.67
FAM220A-206ENST00000616824 DNMBPQ6XZF7 1577 aa37.98■■■■□ 3.67
FAM220A-206ENST00000616824 URB2Q14146 1524 aaKnown RBP37.96■■■■□ 3.67
FAM220A-206ENST00000616824 KIF27Q86VH2 1401 aa37.86■■■■□ 3.65
FAM220A-206ENST00000616824 UBTFP17480 764 aaKnown RBP37.85■■■■□ 3.65
FAM220A-206ENST00000616824 POLA1P09884 1462 aaPredicted RBP37.84■■■■□ 3.65
FAM220A-206ENST00000616824 RAD54L2Q9Y4B4 1467 aa37.84■■■■□ 3.65
FAM220A-206ENST00000616824 CUX2O14529 1486 aa37.83■■■■□ 3.65
FAM220A-206ENST00000616824 GOLGA3Q08378 1498 aa37.75■■■■□ 3.63
FAM220A-206ENST00000616824 RAPGEF2Q9Y4G8 1499 aa37.69■■■■□ 3.62
FAM220A-206ENST00000616824 KIF21BO75037 1637 aa37.68■■■■□ 3.62
FAM220A-206ENST00000616824 TNIKQ9UKE5 1360 aa37.67■■■■□ 3.62
FAM220A-206ENST00000616824 MRC2Q9UBG0 1479 aa37.66■■■■□ 3.62
FAM220A-206ENST00000616824 ERCC6Q03468 1493 aa37.66■■■■□ 3.62
FAM220A-206ENST00000616824 IGF1RP08069 1367 aa37.61■■■■□ 3.61
FAM220A-206ENST00000616824 ABCA10Q8WWZ4 1543 aa37.6■■■■□ 3.61
FAM220A-206ENST00000616824 PRXQ9BXM0 1461 aa37.6■■■■□ 3.61
FAM220A-206ENST00000616824 ACIN1Q9UKV3 1341 aaKnown RBP37.56■■■■□ 3.6
FAM220A-206ENST00000616824 CEP162Q5TB80 1403 aa37.54■■■■□ 3.6
FAM220A-206ENST00000616824 TDRD9Q8NDG6 1382 aaKnown RBP37.51■■■■□ 3.6
FAM220A-206ENST00000616824 RANGAP1P46060 587 aaPredicted RBP37.45■■■■□ 3.59
FAM220A-206ENST00000616824 ERICH3Q5RHP9 1530 aa37.42■■■■□ 3.58
FAM220A-206ENST00000616824 CARMIL1Q5VZK9 1371 aa37.41■■■■□ 3.58
FAM220A-206ENST00000616824 WDR62O43379 1518 aa37.41■■■■□ 3.58
FAM220A-206ENST00000616824 WDR97A6NE52 1622 aa37.39■■■■□ 3.58
FAM220A-206ENST00000616824 TARBP1Q13395 1621 aaKnown RBP37.37■■■■□ 3.57
FAM220A-206ENST00000616824 THOC2Q8NI27 1593 aaKnown RBP37.31■■■■□ 3.56
FAM220A-206ENST00000616824 GAPVD1Q14C86 1478 aa37.3■■■■□ 3.56
FAM220A-206ENST00000616824 NEUROD1Q13562 356 aa37.26■■■■□ 3.56
FAM220A-206ENST00000616824 ABCA5Q8WWZ7 1642 aa37.26■■■■□ 3.56
FAM220A-206ENST00000616824 AQRO60306 1485 aaKnown RBP eCLIP37.24■■■■□ 3.55
FAM220A-206ENST00000616824 CLIP1P30622 1438 aa37.24■■■■□ 3.55
FAM220A-206ENST00000616824 CENPBP07199 599 aaPredicted RBP37.2■■■■□ 3.55
FAM220A-206ENST00000616824 IFT140Q96RY7 1462 aa37.19■■■■□ 3.54
FAM220A-206ENST00000616824 ZNF608Q9ULD9 1512 aaPredicted RBP37.17■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms