Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
HIST3H2BBQ8N257 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
HIST3H2BBQ8N257 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
HIST3H2BBQ8N257 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HIST3H2BBQ8N257 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HIST3H2BBQ8N257 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.34■■□□□ 1.65
HIST3H2BBQ8N257 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.32■■□□□ 1.64
HIST3H2BBQ8N257 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
HIST3H2BBQ8N257 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
HIST3H2BBQ8N257 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
HIST3H2BBQ8N257 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HIST3H2BBQ8N257 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
HIST3H2BBQ8N257 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HIST3H2BBQ8N257 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.45■■□□□ 1.5
HIST3H2BBQ8N257 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HIST3H2BBQ8N257 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HIST3H2BBQ8N257 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HIST3H2BBQ8N257 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
HIST3H2BBQ8N257 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
HIST3H2BBQ8N257 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIST3H2BBQ8N257 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIST3H2BBQ8N257 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
HIST3H2BBQ8N257 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
HIST3H2BBQ8N257 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.69■■□□□ 1.38
HIST3H2BBQ8N257 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HIST3H2BBQ8N257 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.68■■□□□ 1.38
HIST3H2BBQ8N257 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HIST3H2BBQ8N257 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HIST3H2BBQ8N257 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
HIST3H2BBQ8N257 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HIST3H2BBQ8N257 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HIST3H2BBQ8N257 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
HIST3H2BBQ8N257 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HIST3H2BBQ8N257 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
HIST3H2BBQ8N257 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
HIST3H2BBQ8N257 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
HIST3H2BBQ8N257 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HIST3H2BBQ8N257 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.42■■□□□ 1.34
HIST3H2BBQ8N257 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HIST3H2BBQ8N257 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
HIST3H2BBQ8N257 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.39■■□□□ 1.34
HIST3H2BBQ8N257 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.39■■□□□ 1.34
HIST3H2BBQ8N257 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.39■■□□□ 1.34
HIST3H2BBQ8N257 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HIST3H2BBQ8N257 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HIST3H2BBQ8N257 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HIST3H2BBQ8N257 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HIST3H2BBQ8N257 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.21■■□□□ 1.31
HIST3H2BBQ8N257 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HIST3H2BBQ8N257 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HIST3H2BBQ8N257 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST3H2BBQ8N257 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIST3H2BBQ8N257 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HIST3H2BBQ8N257 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
HIST3H2BBQ8N257 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HIST3H2BBQ8N257 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.99■■□□□ 1.27
HIST3H2BBQ8N257 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
HIST3H2BBQ8N257 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HIST3H2BBQ8N257 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.94■■□□□ 1.26
HIST3H2BBQ8N257 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
HIST3H2BBQ8N257 AL161658.1-201ENST00000623641 1967 ntBASIC22.81■■□□□ 1.24
HIST3H2BBQ8N257 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
HIST3H2BBQ8N257 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
HIST3H2BBQ8N257 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.78■■□□□ 1.24
HIST3H2BBQ8N257 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HIST3H2BBQ8N257 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.7■■□□□ 1.22
HIST3H2BBQ8N257 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
HIST3H2BBQ8N257 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HIST3H2BBQ8N257 AL356512.1-201ENST00000607453 1739 ntBASIC22.65■■□□□ 1.22
HIST3H2BBQ8N257 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HIST3H2BBQ8N257 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
HIST3H2BBQ8N257 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HIST3H2BBQ8N257 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
HIST3H2BBQ8N257 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HIST3H2BBQ8N257 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HIST3H2BBQ8N257 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HIST3H2BBQ8N257 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST3H2BBQ8N257 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.51■■□□□ 1.19
HIST3H2BBQ8N257 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST3H2BBQ8N257 AC139426.1-201ENST00000568218 2529 ntBASIC22.42■■□□□ 1.18
HIST3H2BBQ8N257 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST3H2BBQ8N257 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HIST3H2BBQ8N257 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HIST3H2BBQ8N257 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC22.3■■□□□ 1.16
HIST3H2BBQ8N257 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.3■■□□□ 1.16
HIST3H2BBQ8N257 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIST3H2BBQ8N257 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIST3H2BBQ8N257 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC22.28■■□□□ 1.16
HIST3H2BBQ8N257 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HIST3H2BBQ8N257 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST3H2BBQ8N257 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HIST3H2BBQ8N257 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HIST3H2BBQ8N257 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST3H2BBQ8N257 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST3H2BBQ8N257 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.22■■□□□ 1.15
HIST3H2BBQ8N257 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
HIST3H2BBQ8N257 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST3H2BBQ8N257 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HIST3H2BBQ8N257 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
HIST3H2BBQ8N257 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms