Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.75
DHX40Q8IX18 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.26■■■□□ 2.75
DHX40Q8IX18 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
DHX40Q8IX18 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
DHX40Q8IX18 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
DHX40Q8IX18 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
DHX40Q8IX18 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
DHX40Q8IX18 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
DHX40Q8IX18 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DHX40Q8IX18 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.15■■■□□ 2.74
DHX40Q8IX18 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.15■■■□□ 2.74
DHX40Q8IX18 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
DHX40Q8IX18 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
DHX40Q8IX18 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
DHX40Q8IX18 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
DHX40Q8IX18 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.06■■■□□ 2.72
DHX40Q8IX18 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
DHX40Q8IX18 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
DHX40Q8IX18 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
DHX40Q8IX18 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32■■■□□ 2.71
DHX40Q8IX18 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
DHX40Q8IX18 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
DHX40Q8IX18 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.99■■■□□ 2.71
DHX40Q8IX18 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
DHX40Q8IX18 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
DHX40Q8IX18 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
DHX40Q8IX18 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
DHX40Q8IX18 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
DHX40Q8IX18 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
DHX40Q8IX18 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.92■■■□□ 2.7
DHX40Q8IX18 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
DHX40Q8IX18 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
DHX40Q8IX18 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
DHX40Q8IX18 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
DHX40Q8IX18 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.84■■■□□ 2.69
DHX40Q8IX18 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
DHX40Q8IX18 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
DHX40Q8IX18 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DHX40Q8IX18 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
DHX40Q8IX18 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
DHX40Q8IX18 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
DHX40Q8IX18 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.77■■■□□ 2.68
DHX40Q8IX18 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
DHX40Q8IX18 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
DHX40Q8IX18 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.74■■■□□ 2.67
DHX40Q8IX18 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
DHX40Q8IX18 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
DHX40Q8IX18 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
DHX40Q8IX18 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
DHX40Q8IX18 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.69■■■□□ 2.66
DHX40Q8IX18 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
DHX40Q8IX18 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
DHX40Q8IX18 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
DHX40Q8IX18 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
DHX40Q8IX18 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
DHX40Q8IX18 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.62■■■□□ 2.65
DHX40Q8IX18 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
DHX40Q8IX18 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
DHX40Q8IX18 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
DHX40Q8IX18 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
DHX40Q8IX18 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
DHX40Q8IX18 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
DHX40Q8IX18 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.59■■■□□ 2.65
DHX40Q8IX18 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
DHX40Q8IX18 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
DHX40Q8IX18 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
DHX40Q8IX18 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
DHX40Q8IX18 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
DHX40Q8IX18 AC015813.7-201ENST00000623294 581 ntBASIC31.54■■■□□ 2.64
DHX40Q8IX18 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
DHX40Q8IX18 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.52■■■□□ 2.64
DHX40Q8IX18 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
DHX40Q8IX18 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
DHX40Q8IX18 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
DHX40Q8IX18 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DHX40Q8IX18 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
DHX40Q8IX18 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
DHX40Q8IX18 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
DHX40Q8IX18 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
DHX40Q8IX18 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
DHX40Q8IX18 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
DHX40Q8IX18 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
DHX40Q8IX18 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.34■■■□□ 2.61
DHX40Q8IX18 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DHX40Q8IX18 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.33■■■□□ 2.61
DHX40Q8IX18 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DHX40Q8IX18 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.32■■■□□ 2.6
DHX40Q8IX18 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
DHX40Q8IX18 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
DHX40Q8IX18 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DHX40Q8IX18 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
DHX40Q8IX18 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DHX40Q8IX18 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.28■■■□□ 2.6
DHX40Q8IX18 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
DHX40Q8IX18 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.27■■■□□ 2.6
DHX40Q8IX18 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
DHX40Q8IX18 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
DHX40Q8IX18 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
DHX40Q8IX18 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.21■■■□□ 2.59
DHX40Q8IX18 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms