Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.96■■□□□ 1.43
EXD3Q8N9H8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
EXD3Q8N9H8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
EXD3Q8N9H8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.43
EXD3Q8N9H8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
EXD3Q8N9H8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
EXD3Q8N9H8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
EXD3Q8N9H8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
EXD3Q8N9H8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
EXD3Q8N9H8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.95■■□□□ 1.42
EXD3Q8N9H8 RARRES2P1-201ENST00000474487 481 ntBASIC23.95■■□□□ 1.42
EXD3Q8N9H8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
EXD3Q8N9H8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
EXD3Q8N9H8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.95■■□□□ 1.42
EXD3Q8N9H8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
EXD3Q8N9H8 TSPY13P-201ENST00000338964 914 ntBASIC23.94■■□□□ 1.42
EXD3Q8N9H8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
EXD3Q8N9H8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
EXD3Q8N9H8 ST7-AS1-201ENST00000456775 1889 ntBASIC23.94■■□□□ 1.42
EXD3Q8N9H8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
EXD3Q8N9H8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
EXD3Q8N9H8 AC004987.1-201ENST00000428627 508 ntBASIC23.93■■□□□ 1.42
EXD3Q8N9H8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
EXD3Q8N9H8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
EXD3Q8N9H8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
EXD3Q8N9H8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
EXD3Q8N9H8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
EXD3Q8N9H8 ATP5G2P3-201ENST00000429083 425 ntBASIC23.9■■□□□ 1.42
EXD3Q8N9H8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
EXD3Q8N9H8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
EXD3Q8N9H8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.9■■□□□ 1.42
EXD3Q8N9H8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
EXD3Q8N9H8 KRT18P60-201ENST00000312876 1297 ntBASIC23.89■■□□□ 1.41
EXD3Q8N9H8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
EXD3Q8N9H8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
EXD3Q8N9H8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
EXD3Q8N9H8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
EXD3Q8N9H8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
EXD3Q8N9H8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.88■■□□□ 1.41
EXD3Q8N9H8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
EXD3Q8N9H8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
EXD3Q8N9H8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.87■■□□□ 1.41
EXD3Q8N9H8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
EXD3Q8N9H8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
EXD3Q8N9H8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
EXD3Q8N9H8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
EXD3Q8N9H8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
EXD3Q8N9H8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 AC060814.1-201ENST00000554326 538 ntBASIC23.86■■□□□ 1.41
EXD3Q8N9H8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
EXD3Q8N9H8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.85■■□□□ 1.41
EXD3Q8N9H8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.85■■□□□ 1.41
EXD3Q8N9H8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
EXD3Q8N9H8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.85■■□□□ 1.41
EXD3Q8N9H8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
EXD3Q8N9H8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
EXD3Q8N9H8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
EXD3Q8N9H8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
EXD3Q8N9H8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
EXD3Q8N9H8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
EXD3Q8N9H8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
EXD3Q8N9H8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
EXD3Q8N9H8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
EXD3Q8N9H8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
EXD3Q8N9H8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.83■■□□□ 1.41
EXD3Q8N9H8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
EXD3Q8N9H8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
EXD3Q8N9H8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
EXD3Q8N9H8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
EXD3Q8N9H8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
EXD3Q8N9H8 AL135925.1-201ENST00000605920 1701 ntBASIC23.8■■□□□ 1.4
EXD3Q8N9H8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
EXD3Q8N9H8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
EXD3Q8N9H8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.79■■□□□ 1.4
EXD3Q8N9H8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EXD3Q8N9H8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
EXD3Q8N9H8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EXD3Q8N9H8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.78■■□□□ 1.4
EXD3Q8N9H8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.78■■□□□ 1.4
EXD3Q8N9H8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EXD3Q8N9H8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EXD3Q8N9H8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
EXD3Q8N9H8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
EXD3Q8N9H8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EXD3Q8N9H8 AC139426.1-201ENST00000568218 2529 ntBASIC23.77■■□□□ 1.4
EXD3Q8N9H8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EXD3Q8N9H8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
EXD3Q8N9H8 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.76■■□□□ 1.39
EXD3Q8N9H8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EXD3Q8N9H8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EXD3Q8N9H8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EXD3Q8N9H8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.75■■□□□ 1.39
EXD3Q8N9H8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms