RNA–Protein interactions for RNA: ENST00000594794.5

HOMER3-207, Transcript of homer scaffold protein 3, humanhuman

TSL 5 BASIC

Gene HOMER3, Length 903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-207ENST00000594794 NISCHQ9Y2I1 1504 aa60.22■■■■■ 7.23
HOMER3-207ENST00000594794 CCDC180Q9P1Z9 1646 aa54.02■■■■■ 6.24
HOMER3-207ENST00000594794 ABCC9O60706 1549 aa53.66■■■■■ 6.18
HOMER3-207ENST00000594794 RB1CC1Q8TDY2 1594 aa51.31■■■■■ 5.8
HOMER3-207ENST00000594794 NACADO15069 1562 aa51.05■■■■■ 5.76
HOMER3-207ENST00000594794 MYO15BQ96JP2 1530 aa50.53■■■■■ 5.68
HOMER3-207ENST00000594794 DCAF8L2P0C7V8 631 aa50.51■■■■■ 5.68
HOMER3-207ENST00000594794 DNAJC5BQ9UF47 199 aa50.25■■■■■ 5.63
HOMER3-207ENST00000594794 UNC13AQ9UPW8 1703 aa50.04■■■■■ 5.6
HOMER3-207ENST00000594794 ZCCHC6Q5VYS8 1495 aaKnown RBP49.95■■■■■ 5.59
HOMER3-207ENST00000594794 PABPN1Q86U42 306 aaKnown RBP eCLIP49.94■■■■■ 5.59
HOMER3-207ENST00000594794 DCAF1Q9Y4B6 1507 aa49.9■■■■■ 5.58
HOMER3-207ENST00000594794 BICRAQ9NZM4 1560 aa49.75■■■■■ 5.56
HOMER3-207ENST00000594794 SHROOM4Q9ULL8 1493 aa49.34■■■■■ 5.49
HOMER3-207ENST00000594794 SCRIBQ14160 1630 aa49.03■■■■■ 5.44
HOMER3-207ENST00000594794 CC2D2AQ9P2K1 1620 aa48.55■■■■■ 5.36
HOMER3-207ENST00000594794 EIF4G1Q04637 1599 aaKnown RBP48.53■■■■■ 5.36
HOMER3-207ENST00000594794 CECR2Q9BXF3 1484 aa48.41■■■■■ 5.34
HOMER3-207ENST00000594794 NCAPD3P42695 1498 aa47.13■■■■■ 5.13
HOMER3-207ENST00000594794 ATAD2BQ9ULI0 1458 aa46.95■■■■■ 5.11
HOMER3-207ENST00000594794 SMARCA4P51532 1647 aa46.9■■■■■ 5.1
HOMER3-207ENST00000594794 SMARCA2P51531 1590 aa46.86■■■■■ 5.09
HOMER3-207ENST00000594794 HMGXB3Q12766 1538 aa46.79■■■■■ 5.08
HOMER3-207ENST00000594794 BAZ1AQ9NRL2 1556 aaPredicted RBP46.76■■■■■ 5.08
HOMER3-207ENST00000594794 PEG3Q9GZU2 1588 aa46.58■■■■■ 5.05
HOMER3-207ENST00000594794 BAZ1BQ9UIG0 1483 aaKnown RBP46.46■■■■■ 5.03
HOMER3-207ENST00000594794 CUX2O14529 1486 aa46.37■■■■■ 5.01
HOMER3-207ENST00000594794 ERCC6Q03468 1493 aa46.37■■■■■ 5.01
HOMER3-207ENST00000594794 MROH2BQ7Z745 1585 aa46.32■■■■■ 5.01
HOMER3-207ENST00000594794 DNAJC5Q9H3Z4 198 aa46.29■■■■■ 5
HOMER3-207ENST00000594794 NESP48681 1621 aa46.13■■■■■ 4.97
HOMER3-207ENST00000594794 LAMC3Q9Y6N6 1575 aa46.01■■■■■ 4.96
HOMER3-207ENST00000594794 PDS5BQ9NTI5 1447 aa45.75■■■■■ 4.91
HOMER3-207ENST00000594794 WIZO95785 1651 aa45.73■■■■■ 4.91
HOMER3-207ENST00000594794 THOC2Q8NI27 1593 aaKnown RBP45.73■■■■■ 4.91
HOMER3-207ENST00000594794 CADPSQ9ULU8 1353 aa45.66■■■■■ 4.9
HOMER3-207ENST00000594794 KIF21AQ7Z4S6 1674 aa45.57■■■■■ 4.88
HOMER3-207ENST00000594794 RSF1Q96T23 1441 aaPredicted RBP45.47■■■■■ 4.87
HOMER3-207ENST00000594794 MRC2Q9UBG0 1479 aa45.29■■■■■ 4.84
HOMER3-207ENST00000594794 TOP2AP11388 1531 aaKnown RBP45.27■■■■■ 4.84
HOMER3-207ENST00000594794 CFTRP13569 1480 aa45.2■■■■■ 4.83
HOMER3-207ENST00000594794 WDR62O43379 1518 aa45.2■■■■■ 4.83
HOMER3-207ENST00000594794 CEP164Q9UPV0 1460 aa45.13■■■■■ 4.82
HOMER3-207ENST00000594794 FANCD2Q9BXW9 1451 aa45.09■■■■■ 4.81
HOMER3-207ENST00000594794 PRDM2Q13029 1718 aa44.72■■■■■ 4.75
HOMER3-207ENST00000594794 CCDC88BA6NC98 1476 aa44.72■■■■■ 4.75
HOMER3-207ENST00000594794 URB2Q14146 1524 aaKnown RBP44.69■■■■■ 4.74
HOMER3-207ENST00000594794 ABCC8Q09428 1581 aa44.31■■■■■ 4.68
HOMER3-207ENST00000594794 IFT140Q96RY7 1462 aa44.27■■■■■ 4.68
HOMER3-207ENST00000594794 TOPBP1Q92547 1522 aa44.26■■■■■ 4.68
HOMER3-207ENST00000594794 OSCARQ8IYS5 282 aa44.22■■■■■ 4.67
HOMER3-207ENST00000594794 DNMBPQ6XZF7 1577 aa44.13■■■■■ 4.65
HOMER3-207ENST00000594794 TRIM41Q8WV44 630 aa44.12■■■■■ 4.65
HOMER3-207ENST00000594794 ZNF608Q9ULD9 1512 aaPredicted RBP44.07■■■■■ 4.65
HOMER3-207ENST00000594794 EIF4G3O43432 1585 aaKnown RBP43.86■■■■■ 4.61
HOMER3-207ENST00000594794 TARBP1Q13395 1621 aaKnown RBP43.86■■■■■ 4.61
HOMER3-207ENST00000594794 SUPT5HO00267 1087 aaKnown RBP43.84■■■■■ 4.61
HOMER3-207ENST00000594794 POLA1P09884 1462 aaPredicted RBP43.82■■■■■ 4.6
HOMER3-207ENST00000594794 AQRO60306 1485 aaKnown RBP eCLIP43.69■■■■■ 4.58
HOMER3-207ENST00000594794 SOGA1O94964 1423 aa43.61■■■■■ 4.57
HOMER3-207ENST00000594794 WDR97A6NE52 1622 aa43.58■■■■■ 4.57
HOMER3-207ENST00000594794 RAD54L2Q9Y4B4 1467 aa43.57■■■■■ 4.56
HOMER3-207ENST00000594794 RIMBP3CA6NJZ7 1639 aa43.55■■■■■ 4.56
HOMER3-207ENST00000594794 RIMBP3BA6NNM3 1639 aa43.55■■■■■ 4.56
HOMER3-207ENST00000594794 RIMBP3Q9UFD9 1639 aa43.55■■■■■ 4.56
HOMER3-207ENST00000594794 FGD5Q6ZNL6 1462 aa43.53■■■■■ 4.56
HOMER3-207ENST00000594794 CUX1P39880 1505 aa43.53■■■■■ 4.56
HOMER3-207ENST00000594794 ARHGEF11O15085 1522 aa43.48■■■■■ 4.55
HOMER3-207ENST00000594794 CHD1O14646 1710 aa43.46■■■■■ 4.55
HOMER3-207ENST00000594794 TDRD9Q8NDG6 1382 aaKnown RBP43.44■■■■■ 4.54
HOMER3-207ENST00000594794 FBLN2P98095 1184 aa43.3■■■■■ 4.52
HOMER3-207ENST00000594794 MAGI1Q96QZ7 1491 aaPredicted RBP43.28■■■■■ 4.52
HOMER3-207ENST00000594794 GRIN2BQ13224 1484 aa43.26■■■■■ 4.52
HOMER3-207ENST00000594794 SNAPC4Q5SXM2 1469 aa43.26■■■■■ 4.52
HOMER3-207ENST00000594794 ABCA10Q8WWZ4 1543 aa43.14■■■■■ 4.5
HOMER3-207ENST00000594794 CHMP7Q8WUX9 453 aaPredicted RBP43.12■■■■■ 4.49
HOMER3-207ENST00000594794 SYNJ2O15056 1496 aa43.1■■■■■ 4.49
HOMER3-207ENST00000594794 GAPVD1Q14C86 1478 aa43.1■■■■■ 4.49
HOMER3-207ENST00000594794 CYB5RLQ6IPT4 315 aa43.07■■■■■ 4.49
HOMER3-207ENST00000594794 SYNJ1O43426 1573 aa43.07■■■■■ 4.48
HOMER3-207ENST00000594794 CLASP1Q7Z460 1538 aa43.07■■■■■ 4.48
HOMER3-207ENST00000594794 ARAP1Q96P48 1450 aa43.04■■■■■ 4.48
HOMER3-207ENST00000594794 PBRM1Q86U86 1689 aa43.02■■■■■ 4.48
HOMER3-207ENST00000594794 ABCA5Q8WWZ7 1642 aa43.01■■■■■ 4.48
HOMER3-207ENST00000594794 WRNQ14191 1432 aaPredicted RBP eCLIP42.98■■■■■ 4.47
HOMER3-207ENST00000594794 TOP2BQ02880 1626 aa42.93■■■■■ 4.46
HOMER3-207ENST00000594794 BIVM-ERCC5R4GMW8 1640 aa42.92■■■■■ 4.46
HOMER3-207ENST00000594794 GRIN2AQ12879 1464 aa42.68■■■■■ 4.42
HOMER3-207ENST00000594794 ADAMTS12P58397 1594 aa42.65■■■■■ 4.42
HOMER3-207ENST00000594794 ERICH3Q5RHP9 1530 aa42.62■■■■■ 4.41
HOMER3-207ENST00000594794 FHAD1B1AJZ9 1412 aa42.6■■■■■ 4.41
HOMER3-207ENST00000594794 NUP160Q12769 1436 aa42.58■■■■■ 4.41
HOMER3-207ENST00000594794 TRHP20396 242 aaPredicted RBP42.49■■■■■ 4.39
HOMER3-207ENST00000594794 CEP170Q5SW79 1584 aa42.47■■■■■ 4.39
HOMER3-207ENST00000594794 SHROOM2Q13796 1616 aa42.35■■■■■ 4.37
HOMER3-207ENST00000594794 ERCC6L2Q5T890 1561 aa42.27■■■■■ 4.36
HOMER3-207ENST00000594794 KIF27Q86VH2 1401 aa42.11■■■■■ 4.33
HOMER3-207ENST00000594794 JPH4Q96JJ6 628 aa42.1■■■■■ 4.33
HOMER3-207ENST00000594794 PRG4Q92954 1404 aaPredicted RBP42.07■■■■■ 4.33
HOMER3-207ENST00000594794 IGF1RP08069 1367 aa42.06■■■■■ 4.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms