Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 SLC2A1-208ENST00000630287 2398 ntTSL 521.42■■□□□ 1.028e-7■■□□□ 14.3
HNRNPUQ00839 SLC2A1-201ENST00000372500 533 ntTSL 319.53■□□□□ 0.728e-7■■□□□ 14.3
HNRNPUQ00839 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.368e-7■■□□□ 14.3
HNRNPUQ00839 SLC2A1-205ENST00000475162 598 ntTSL 517.21■□□□□ 0.358e-7■■□□□ 14.3
HNRNPUQ00839 XIST-202ENST00000417942 724 ntTSL 37.47□□□□□ -1.213e-6■■□□□ 14.2
HNRNPUQ00839 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.89□□□□□ -1.313e-6■■□□□ 14.2
HNRNPUQ00839 XIST-203ENST00000421322 446 ntTSL 25.68□□□□□ -1.53e-6■■□□□ 14.2
HNRNPUQ00839 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC18.19■□□□□ 0.56e-7■■□□□ 14.2
HNRNPUQ00839 MEG3-202ENST00000398461 3452 ntTSL 1 (best)17.29■□□□□ 0.367e-9■■□□□ 14.2
HNRNPUQ00839 SCARB1-206ENST00000539320 720 ntTSL 227.66■■■□□ 2.023e-6■■□□□ 14.2
HNRNPUQ00839 SCARB1-210ENST00000545493 581 ntTSL 226.32■■□□□ 1.83e-6■■□□□ 14.2
HNRNPUQ00839 SCARB1-207ENST00000541661 476 ntTSL 515.79■□□□□ 0.123e-6■■□□□ 14.2
HNRNPUQ00839 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.192e-6■■□□□ 14.1
HNRNPUQ00839 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC19.71■□□□□ 0.755e-6■■□□□ 14.1
HNRNPUQ00839 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.234e-6■■□□□ 14.1
HNRNPUQ00839 AP2A2-212ENST00000528195 562 ntTSL 322.22■■□□□ 1.154e-6■■□□□ 14.1
HNRNPUQ00839 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC22.16■■□□□ 1.144e-6■■□□□ 14.1
HNRNPUQ00839 AP2A2-213ENST00000528815 3072 ntTSL 219.28■□□□□ 0.684e-6■■□□□ 14.1
HNRNPUQ00839 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.524e-6■■□□□ 14.1
HNRNPUQ00839 XIST-206ENST00000434839 2865 ntTSL 5 BASIC10.77□□□□□ -0.691e-6■■□□□ 14.1
HNRNPUQ00839 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.32□□□□□ -1.41e-6■■□□□ 14.1
HNRNPUQ00839 XIST-211ENST00000635841 1734 ntTSL 5 BASIC11.8□□□□□ -0.524e-8■■□□□ 14
HNRNPUQ00839 MEG3-203ENST00000398474 1721 ntTSL 221.77■■□□□ 1.084e-9■■□□□ 14
HNRNPUQ00839 MEG3-225ENST00000555928 720 ntTSL 1 (best)20.45■□□□□ 0.864e-9■■□□□ 14
HNRNPUQ00839 GREB1-207ENST00000432985 2052 ntTSL 1 (best)17.45■□□□□ 0.381e-7■■□□□ 14
HNRNPUQ00839 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.078e-10■■□□□ 13.9
HNRNPUQ00839 XPO1-206ENST00000428210 6776 ntTSL 218.2■□□□□ 0.58e-10■■□□□ 13.9
HNRNPUQ00839 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.58e-10■■□□□ 13.9
HNRNPUQ00839 XPO1-209ENST00000443240 565 ntTSL 47.24□□□□□ -1.258e-10■■□□□ 13.9
HNRNPUQ00839 XPO1-212ENST00000457483 488 ntTSL 47.23□□□□□ -1.258e-10■■□□□ 13.9
HNRNPUQ00839 XPO1-220ENST00000481214 720 ntTSL 26.18□□□□□ -1.428e-10■■□□□ 13.9
HNRNPUQ00839 XPO1-207ENST00000436018 318 ntTSL 45□□□□□ -1.618e-10■■□□□ 13.9
HNRNPUQ00839 FGFR1-217ENST00000470826 2281 ntTSL 1 (best)29.07■■■□□ 2.244e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-223ENST00000496296 1898 ntTSL 1 (best)28.8■■■□□ 2.24e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-205ENST00000397090 777 ntTSL 227.76■■■□□ 2.034e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC27.27■■□□□ 1.964e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.944e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.824e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC25.27■■□□□ 1.644e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.384e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC20.43■□□□□ 0.864e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC20.43■□□□□ 0.864e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC20.34■□□□□ 0.854e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-222ENST00000487647 1608 ntTSL 1 (best)19.83■□□□□ 0.764e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-210ENST00000413133 587 ntTSL 419.63■□□□□ 0.734e-7■■□□□ 13.9
HNRNPUQ00839 ABAT-207ENST00000563992 1870 ntTSL 218.72■□□□□ 0.591e-6■■□□□ 13.9
HNRNPUQ00839 FGFR1-221ENST00000484370 826 ntTSL 1 (best)17.8■□□□□ 0.444e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC17.52■□□□□ 0.44e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC17■□□□□ 0.314e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-226ENST00000525001 1155 ntTSL 516.98■□□□□ 0.314e-7■■□□□ 13.9
HNRNPUQ00839 WDR6-217ENST00000491365 491 ntTSL 316.58■□□□□ 0.249e-8■■□□□ 13.9
HNRNPUQ00839 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.194e-7■■□□□ 13.9
HNRNPUQ00839 WDR6-215ENST00000489427 564 ntTSL 415.68■□□□□ 0.19e-8■■□□□ 13.9
HNRNPUQ00839 ABAT-209ENST00000564714 466 ntTSL 314.67□□□□□ -0.061e-6■■□□□ 13.9
HNRNPUQ00839 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.14e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-231ENST00000527203 556 ntTSL 314.18□□□□□ -0.144e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-229ENST00000526742 657 ntTSL 413.27□□□□□ -0.294e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-212ENST00000434187 529 ntTSL 413.27□□□□□ -0.294e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-234ENST00000530568 467 ntTSL 312.47□□□□□ -0.414e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-233ENST00000529552 688 ntTSL 411.08□□□□□ -0.644e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-240ENST00000533668 571 ntTSL 59.92□□□□□ -0.824e-7■■□□□ 13.9
HNRNPUQ00839 FGFR1-235ENST00000530701 276 ntTSL 1 (best)2.93□□□□□ -1.944e-7■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-209ENST00000518437 240 ntTSL 221.84■■□□□ 1.094e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.9■□□□□ 0.624e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-203ENST00000469846 670 ntTSL 313□□□□□ -0.334e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC10.08□□□□□ -0.84e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-201ENST00000467069 667 ntTSL 58.06□□□□□ -1.124e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.9□□□□□ -1.144e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-218ENST00000522525 1867 ntTSL 1 (best)6.64□□□□□ -1.354e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.58□□□□□ -1.364e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-216ENST00000521708 549 ntTSL 34.96□□□□□ -1.624e-6■■□□□ 13.9
HNRNPUQ00839 THUMPD3-AS1-207ENST00000494680 544 ntTSL 54.66□□□□□ -1.664e-6■■□□□ 13.9
HNRNPUQ00839 BLCAP-213ENST00000467603 439 ntTSL 318.36■□□□□ 0.534e-8■■□□□ 13.9
HNRNPUQ00839 BLCAP-206ENST00000411780 714 ntTSL 39.93□□□□□ -0.824e-8■■□□□ 13.9
HNRNPUQ00839 MEG3-208ENST00000429159 1608 ntTSL 1 (best)25.14■■□□□ 1.617e-8■■□□□ 13.8
HNRNPUQ00839 MEG3-227ENST00000556736 1689 ntTSL 224.53■■□□□ 1.527e-8■■□□□ 13.8
HNRNPUQ00839 MEG3-224ENST00000554639 1712 ntTSL 1 (best)24.52■■□□□ 1.527e-8■■□□□ 13.8
HNRNPUQ00839 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC23.8■■□□□ 1.47e-8■■□□□ 13.8
HNRNPUQ00839 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC22.96■■□□□ 1.277e-8■■□□□ 13.8
HNRNPUQ00839 MEG3-217ENST00000521404 1426 ntTSL 1 (best)20.64■□□□□ 0.897e-8■■□□□ 13.8
HNRNPUQ00839 MEG3-204ENST00000398518 1674 ntTSL 219.56■□□□□ 0.727e-8■■□□□ 13.8
HNRNPUQ00839 MEG3-209ENST00000451743 1582 ntTSL 1 (best)18.93■□□□□ 0.627e-8■■□□□ 13.8
HNRNPUQ00839 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC17.79■□□□□ 0.447e-8■■□□□ 13.8
HNRNPUQ00839 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC17.05■□□□□ 0.328e-7■■□□□ 13.8
HNRNPUQ00839 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.73e-6■■□□□ 13.8
HNRNPUQ00839 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC24.92■■□□□ 1.581e-6■■□□□ 13.7
HNRNPUQ00839 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.061e-6■■□□□ 13.7
HNRNPUQ00839 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.851e-6■■□□□ 13.7
HNRNPUQ00839 MSI2-212ENST00000579590 452 ntTSL 56.23□□□□□ -1.412e-7■■□□□ 13.7
HNRNPUQ00839 MSI2-214ENST00000581776 493 ntTSL 26.11□□□□□ -1.433e-7■■□□□ 13.7
HNRNPUQ00839 MSI2-215ENST00000582453 496 ntTSL 35.4□□□□□ -1.541e-6■■□□□ 13.7
HNRNPUQ00839 PFKL-205ENST00000466134 5986 ntTSL 227.33■■□□□ 1.972e-6■■□□□ 13.7
HNRNPUQ00839 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.512e-6■■□□□ 13.7
HNRNPUQ00839 PFKL-210ENST00000496824 1063 ntTSL 524.07■■□□□ 1.442e-6■■□□□ 13.7
HNRNPUQ00839 PFKL-202ENST00000397961 3390 ntTSL 1 (best)20.85■□□□□ 0.932e-6■■□□□ 13.7
HNRNPUQ00839 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.195e-6■■□□□ 13.7
HNRNPUQ00839 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.515e-6■■□□□ 13.7
HNRNPUQ00839 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.953e-6■■□□□ 13.6
HNRNPUQ00839 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.286e-6■■□□□ 13.6
HNRNPUQ00839 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.116e-6■■□□□ 13.6
Retrieved 100 of 2,288 protein–RNA pairs in 58.4 ms