RNA–Protein interactions for RNA: ENST00000326324.10

FGFR1-201, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 3,816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-201ENST00000326324 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
FGFR1-201ENST00000326324 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
FGFR1-201ENST00000326324 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
FGFR1-201ENST00000326324 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
FGFR1-201ENST00000326324 EHMT2Q96KQ7 1210 aa24.22■■□□□ 1.47
FGFR1-201ENST00000326324 PCGF6Q9BYE7 350 aa24.17■■□□□ 1.46
FGFR1-201ENST00000326324 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
FGFR1-201ENST00000326324 ZCCHC6Q5VYS8 1495 aaKnown RBP23.93■■□□□ 1.42
FGFR1-201ENST00000326324 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
FGFR1-201ENST00000326324 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
FGFR1-201ENST00000326324 PPARGC1BQ86YN6 1023 aaKnown RBP23.79■■□□□ 1.4
FGFR1-201ENST00000326324 HRCP23327 699 aa23.65■■□□□ 1.38
FGFR1-201ENST00000326324 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
FGFR1-201ENST00000326324 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
FGFR1-201ENST00000326324 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
FGFR1-201ENST00000326324 ABCC9O60706 1549 aa23.43■■□□□ 1.34
FGFR1-201ENST00000326324 TTBK1Q5TCY1 1321 aaPredicted RBP23.31■■□□□ 1.32
FGFR1-201ENST00000326324 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
FGFR1-201ENST00000326324 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
FGFR1-201ENST00000326324 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.264e-6■□□□□ 9.3
FGFR1-201ENST00000326324 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
FGFR1-201ENST00000326324 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
FGFR1-201ENST00000326324 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
FGFR1-201ENST00000326324 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
FGFR1-201ENST00000326324 UBTFP17480 764 aaKnown RBP22.63■■□□□ 1.21
FGFR1-201ENST00000326324 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
FGFR1-201ENST00000326324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
FGFR1-201ENST00000326324 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
FGFR1-201ENST00000326324 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
FGFR1-201ENST00000326324 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
FGFR1-201ENST00000326324 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
FGFR1-201ENST00000326324 WIZO95785 1651 aa22.23■■□□□ 1.15
FGFR1-201ENST00000326324 NACADO15069 1562 aa22.23■■□□□ 1.15
FGFR1-201ENST00000326324 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
FGFR1-201ENST00000326324 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
FGFR1-201ENST00000326324 APLP2Q06481 763 aa22.18■■□□□ 1.14
FGFR1-201ENST00000326324 CSRNP3Q8WYN3 585 aa22.08■■□□□ 1.12
FGFR1-201ENST00000326324 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
FGFR1-201ENST00000326324 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
FGFR1-201ENST00000326324 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
FGFR1-201ENST00000326324 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
FGFR1-201ENST00000326324 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
FGFR1-201ENST00000326324 SOGA1O94964 1423 aa21.97■■□□□ 1.11
FGFR1-201ENST00000326324 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
FGFR1-201ENST00000326324 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
FGFR1-201ENST00000326324 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
FGFR1-201ENST00000326324 ITGAEP38570 1179 aa21.93■■□□□ 1.1
FGFR1-201ENST00000326324 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
FGFR1-201ENST00000326324 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
FGFR1-201ENST00000326324 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
FGFR1-201ENST00000326324 CEP162Q5TB80 1403 aa21.78■■□□□ 1.08
FGFR1-201ENST00000326324 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
FGFR1-201ENST00000326324 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
FGFR1-201ENST00000326324 TOP2AP11388 1531 aaKnown RBP21.61■■□□□ 1.05
FGFR1-201ENST00000326324 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
FGFR1-201ENST00000326324 ZNF316A6NFI3 1004 aaPredicted RBP21.57■■□□□ 1.04
FGFR1-201ENST00000326324 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
FGFR1-201ENST00000326324 BAZ1BQ9UIG0 1483 aaKnown RBP21.54■■□□□ 1.04
FGFR1-201ENST00000326324 TNIKQ9UKE5 1360 aa21.53■■□□□ 1.04
FGFR1-201ENST00000326324 CLIP1P30622 1438 aa21.5■■□□□ 1.03
FGFR1-201ENST00000326324 MIER1Q8N108 512 aa21.48■■□□□ 1.03
FGFR1-201ENST00000326324 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
FGFR1-201ENST00000326324 FAM50AQ14320 339 aaKnown RBP21.37■■□□□ 1.01
FGFR1-201ENST00000326324 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
FGFR1-201ENST00000326324 EEA1Q15075 1411 aa21.31■■□□□ 1
FGFR1-201ENST00000326324 RAPGEF2Q9Y4G8 1499 aa21.3■■□□□ 1
FGFR1-201ENST00000326324 KANK4Q5T7N3 995 aaPredicted RBP21.3■■□□□ 1
FGFR1-201ENST00000326324 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
FGFR1-201ENST00000326324 BCANQ96GW7 911 aa21.27■■□□□ 1
FGFR1-201ENST00000326324 UNC13AQ9UPW8 1703 aa21.27■■□□□ 1
FGFR1-201ENST00000326324 ARID3CA6NKF2 412 aa21.26■□□□□ 0.99
FGFR1-201ENST00000326324 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
FGFR1-201ENST00000326324 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
FGFR1-201ENST00000326324 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
FGFR1-201ENST00000326324 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
FGFR1-201ENST00000326324 VPS8Q8N3P4 1428 aa21.11■□□□□ 0.97
FGFR1-201ENST00000326324 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
FGFR1-201ENST00000326324 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
FGFR1-201ENST00000326324 CUX2O14529 1486 aa20.99■□□□□ 0.95
FGFR1-201ENST00000326324 SIN3AQ96ST3 1273 aa20.95■□□□□ 0.94
FGFR1-201ENST00000326324 MYT1Q01538 1121 aa20.91■□□□□ 0.94
FGFR1-201ENST00000326324 DDX10Q13206 875 aaKnown RBP20.89■□□□□ 0.93
FGFR1-201ENST00000326324 CHIC2Q9UKJ5 165 aa20.87■□□□□ 0.93
FGFR1-201ENST00000326324 CARMIL1Q5VZK9 1371 aa20.87■□□□□ 0.93
FGFR1-201ENST00000326324 KIF21BO75037 1637 aa20.87■□□□□ 0.93
FGFR1-201ENST00000326324 NEFLP07196 543 aa20.86■□□□□ 0.93
FGFR1-201ENST00000326324 TRIM52Q96A61 297 aa20.83■□□□□ 0.93
FGFR1-201ENST00000326324 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
FGFR1-201ENST00000326324 FBLN2P98095 1184 aa20.81■□□□□ 0.92
FGFR1-201ENST00000326324 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
FGFR1-201ENST00000326324 ARAP1Q96P48 1450 aa20.8■□□□□ 0.92
FGFR1-201ENST00000326324 CCNB3Q8WWL7 1395 aa20.8■□□□□ 0.92
FGFR1-201ENST00000326324 FKBP8Q14318 412 aa20.79■□□□□ 0.92
FGFR1-201ENST00000326324 CUX1P39880 1505 aa20.77■□□□□ 0.92
FGFR1-201ENST00000326324 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
FGFR1-201ENST00000326324 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
FGFR1-201ENST00000326324 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
FGFR1-201ENST00000326324 SUPT16HQ9Y5B9 1047 aaKnown RBP20.75■□□□□ 0.91
FGFR1-201ENST00000326324 IGF1RP08069 1367 aa20.75■□□□□ 0.91
FGFR1-201ENST00000326324 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms