RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 NISCHQ9Y2I1 1504 aa21.43■■□□□ 1.02
FGFR1-209ENST00000397113 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
FGFR1-209ENST00000397113 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
FGFR1-209ENST00000397113 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.52
FGFR1-209ENST00000397113 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
FGFR1-209ENST00000397113 NACADO15069 1562 aa17.62■□□□□ 0.41
FGFR1-209ENST00000397113 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
FGFR1-209ENST00000397113 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
FGFR1-209ENST00000397113 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
FGFR1-209ENST00000397113 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
FGFR1-209ENST00000397113 ABCC9O60706 1549 aa17.17■□□□□ 0.34
FGFR1-209ENST00000397113 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
FGFR1-209ENST00000397113 PPARGC1BQ86YN6 1023 aaKnown RBP17.07■□□□□ 0.32
FGFR1-209ENST00000397113 DCAF8L2P0C7V8 631 aa16.98■□□□□ 0.31
FGFR1-209ENST00000397113 HRCP23327 699 aa16.98■□□□□ 0.31
FGFR1-209ENST00000397113 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
FGFR1-209ENST00000397113 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
FGFR1-209ENST00000397113 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
FGFR1-209ENST00000397113 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
FGFR1-209ENST00000397113 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
FGFR1-209ENST00000397113 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
FGFR1-209ENST00000397113 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
FGFR1-209ENST00000397113 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
FGFR1-209ENST00000397113 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
FGFR1-209ENST00000397113 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
FGFR1-209ENST00000397113 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
FGFR1-209ENST00000397113 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
FGFR1-209ENST00000397113 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
FGFR1-209ENST00000397113 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
FGFR1-209ENST00000397113 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.21
FGFR1-209ENST00000397113 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
FGFR1-209ENST00000397113 WIZO95785 1651 aa16.26■□□□□ 0.19
FGFR1-209ENST00000397113 TRIM26Q12899 539 aaPredicted RBP16.22■□□□□ 0.19
FGFR1-209ENST00000397113 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
FGFR1-209ENST00000397113 TTBK1Q5TCY1 1321 aaPredicted RBP16.15■□□□□ 0.18
FGFR1-209ENST00000397113 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
FGFR1-209ENST00000397113 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
FGFR1-209ENST00000397113 NCAPD3P42695 1498 aa16.06■□□□□ 0.16
FGFR1-209ENST00000397113 ATAD2BQ9ULI0 1458 aa15.99■□□□□ 0.15
FGFR1-209ENST00000397113 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
FGFR1-209ENST00000397113 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.15
FGFR1-209ENST00000397113 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
FGFR1-209ENST00000397113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
FGFR1-209ENST00000397113 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
FGFR1-209ENST00000397113 YTHDC1Q96MU7 727 aaKnown RBP15.9■□□□□ 0.14
FGFR1-209ENST00000397113 GTF3C3Q9Y5Q9 886 aa15.84■□□□□ 0.13
FGFR1-209ENST00000397113 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
FGFR1-209ENST00000397113 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
FGFR1-209ENST00000397113 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.12
FGFR1-209ENST00000397113 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
FGFR1-209ENST00000397113 CENPBP07199 599 aaPredicted RBP15.73■□□□□ 0.11
FGFR1-209ENST00000397113 ACIN1Q9UKV3 1341 aaKnown RBP15.73■□□□□ 0.11
FGFR1-209ENST00000397113 TOP2BQ02880 1626 aa15.7■□□□□ 0.1
FGFR1-209ENST00000397113 DIEXFQ68CQ4 756 aaKnown RBP15.69■□□□□ 0.1
FGFR1-209ENST00000397113 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
FGFR1-209ENST00000397113 CFTRP13569 1480 aa15.65■□□□□ 0.1
FGFR1-209ENST00000397113 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
FGFR1-209ENST00000397113 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
FGFR1-209ENST00000397113 KIF21BO75037 1637 aa15.5■□□□□ 0.07
FGFR1-209ENST00000397113 RANGAP1P46060 587 aaPredicted RBP15.45■□□□□ 0.06
FGFR1-209ENST00000397113 MYT1Q01538 1121 aa15.39■□□□□ 0.05
FGFR1-209ENST00000397113 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
FGFR1-209ENST00000397113 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
FGFR1-209ENST00000397113 EEA1Q15075 1411 aa15.37■□□□□ 0.05
FGFR1-209ENST00000397113 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
FGFR1-209ENST00000397113 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
FGFR1-209ENST00000397113 CUX1P39880 1505 aa15.35■□□□□ 0.05
FGFR1-209ENST00000397113 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
FGFR1-209ENST00000397113 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
FGFR1-209ENST00000397113 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
FGFR1-209ENST00000397113 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
FGFR1-209ENST00000397113 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
FGFR1-209ENST00000397113 WDR62O43379 1518 aa15.29■□□□□ 0.04
FGFR1-209ENST00000397113 MIER1Q8N108 512 aa15.28■□□□□ 0.04
FGFR1-209ENST00000397113 ZNF316A6NFI3 1004 aaPredicted RBP15.27■□□□□ 0.03
FGFR1-209ENST00000397113 CUL7Q14999 1698 aa15.26■□□□□ 0.03
FGFR1-209ENST00000397113 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.03
FGFR1-209ENST00000397113 PBRM1Q86U86 1689 aa15.19■□□□□ 0.02
FGFR1-209ENST00000397113 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
FGFR1-209ENST00000397113 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
FGFR1-209ENST00000397113 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
FGFR1-209ENST00000397113 BCANQ96GW7 911 aa15.15■□□□□ 0.02
FGFR1-209ENST00000397113 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.014e-6■□□□□ 9.3
FGFR1-209ENST00000397113 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
FGFR1-209ENST00000397113 APLP2Q06481 763 aa15.1■□□□□ 0.01
FGFR1-209ENST00000397113 TOPBP1Q92547 1522 aa15.08■□□□□ 0.01
FGFR1-209ENST00000397113 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
FGFR1-209ENST00000397113 FANCD2Q9BXW9 1451 aa15.05■□□□□ -0
FGFR1-209ENST00000397113 ITGAEP38570 1179 aa15.01□□□□□ -0.01
FGFR1-209ENST00000397113 SAMD9Q5K651 1589 aa15□□□□□ -0.01
FGFR1-209ENST00000397113 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
FGFR1-209ENST00000397113 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
FGFR1-209ENST00000397113 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.02
FGFR1-209ENST00000397113 POLA1P09884 1462 aaPredicted RBP14.94□□□□□ -0.02
FGFR1-209ENST00000397113 MAP3K1Q13233 1512 aa14.94□□□□□ -0.02
FGFR1-209ENST00000397113 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
FGFR1-209ENST00000397113 FGD5Q6ZNL6 1462 aa14.92□□□□□ -0.02
FGFR1-209ENST00000397113 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
FGFR1-209ENST00000397113 CUX2O14529 1486 aa14.89□□□□□ -0.03
FGFR1-209ENST00000397113 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms