RNA–Protein interactions for RNA: ENST00000581776.5

MSI2-214, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2

Gene MSI2, Length 493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-214ENST00000581776 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
MSI2-214ENST00000581776 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
MSI2-214ENST00000581776 POTEDQ86YR6 584 aa21.42■■□□□ 1.02
MSI2-214ENST00000581776 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
MSI2-214ENST00000581776 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
MSI2-214ENST00000581776 FOXD1Q16676 465 aa20.03■□□□□ 0.8
MSI2-214ENST00000581776 MSH5O43196 834 aa19.29■□□□□ 0.68
MSI2-214ENST00000581776 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
MSI2-214ENST00000581776 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
MSI2-214ENST00000581776 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
MSI2-214ENST00000581776 ADRA2BP18089 450 aa17.47■□□□□ 0.39
MSI2-214ENST00000581776 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
MSI2-214ENST00000581776 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
MSI2-214ENST00000581776 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
MSI2-214ENST00000581776 POTEHQ6S545 545 aa16.49■□□□□ 0.23
MSI2-214ENST00000581776 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
MSI2-214ENST00000581776 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
MSI2-214ENST00000581776 C1QBPQ07021 282 aaKnown RBP15.99■□□□□ 0.15
MSI2-214ENST00000581776 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
MSI2-214ENST00000581776 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
MSI2-214ENST00000581776 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
MSI2-214ENST00000581776 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
MSI2-214ENST00000581776 DSG3P32926 999 aa14.81□□□□□ -0.04
MSI2-214ENST00000581776 SP7Q8TDD2 431 aaPredicted RBP14.75□□□□□ -0.05
MSI2-214ENST00000581776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
MSI2-214ENST00000581776 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
MSI2-214ENST00000581776 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
MSI2-214ENST00000581776 NISCHQ9Y2I1 1504 aa14.61□□□□□ -0.07
MSI2-214ENST00000581776 CAPN15O75808 1086 aa14.57□□□□□ -0.08
MSI2-214ENST00000581776 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.09
MSI2-214ENST00000581776 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
MSI2-214ENST00000581776 PLSCR2Q9NRY7 297 aa14.27□□□□□ -0.13
MSI2-214ENST00000581776 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
MSI2-214ENST00000581776 ABCB7O75027 752 aa14.13□□□□□ -0.15
MSI2-214ENST00000581776 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
MSI2-214ENST00000581776 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
MSI2-214ENST00000581776 HAX1O00165 279 aa13.97□□□□□ -0.17
MSI2-214ENST00000581776 ABCC9O60706 1549 aa13.88□□□□□ -0.19
MSI2-214ENST00000581776 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
MSI2-214ENST00000581776 LHX8Q68G74 356 aa13.82□□□□□ -0.2
MSI2-214ENST00000581776 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
MSI2-214ENST00000581776 EVX2Q03828 476 aa13.69□□□□□ -0.22
MSI2-214ENST00000581776 APLP2Q06481 763 aa13.63□□□□□ -0.23
MSI2-214ENST00000581776 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
MSI2-214ENST00000581776 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
MSI2-214ENST00000581776 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
MSI2-214ENST00000581776 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
MSI2-214ENST00000581776 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
MSI2-214ENST00000581776 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
MSI2-214ENST00000581776 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
MSI2-214ENST00000581776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
MSI2-214ENST00000581776 GABBR2O75899 941 aa13.27□□□□□ -0.29
MSI2-214ENST00000581776 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
MSI2-214ENST00000581776 POLA2Q14181 598 aa13.24□□□□□ -0.29
MSI2-214ENST00000581776 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
MSI2-214ENST00000581776 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
MSI2-214ENST00000581776 POTEMA6NI47 508 aa13.11□□□□□ -0.31
MSI2-214ENST00000581776 C19orf67A6NJJ6 358 aa13.08□□□□□ -0.32
MSI2-214ENST00000581776 POTEGQ6S5H5 508 aa13.01□□□□□ -0.33
MSI2-214ENST00000581776 RB1CC1Q8TDY2 1594 aa13.01□□□□□ -0.33
MSI2-214ENST00000581776 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
MSI2-214ENST00000581776 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
MSI2-214ENST00000581776 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
MSI2-214ENST00000581776 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
MSI2-214ENST00000581776 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
MSI2-214ENST00000581776 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
MSI2-214ENST00000581776 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
MSI2-214ENST00000581776 NACADO15069 1562 aa12.77□□□□□ -0.37
MSI2-214ENST00000581776 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
MSI2-214ENST00000581776 UNC13AQ9UPW8 1703 aa12.69□□□□□ -0.38
MSI2-214ENST00000581776 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
MSI2-214ENST00000581776 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
MSI2-214ENST00000581776 BICRAQ9NZM4 1560 aa12.59□□□□□ -0.39
MSI2-214ENST00000581776 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
MSI2-214ENST00000581776 CECR2Q9BXF3 1484 aa12.56□□□□□ -0.4
MSI2-214ENST00000581776 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
MSI2-214ENST00000581776 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
MSI2-214ENST00000581776 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
MSI2-214ENST00000581776 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
MSI2-214ENST00000581776 CLCN6P51797 869 aa12.45□□□□□ -0.42
MSI2-214ENST00000581776 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
MSI2-214ENST00000581776 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
MSI2-214ENST00000581776 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
MSI2-214ENST00000581776 LCE2DQ5TA82 110 aaPredicted RBP12.4□□□□□ -0.42
MSI2-214ENST00000581776 MYO15BQ96JP2 1530 aa12.39□□□□□ -0.43
MSI2-214ENST00000581776 EIF4G1Q04637 1599 aaKnown RBP12.36□□□□□ -0.43
MSI2-214ENST00000581776 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
MSI2-214ENST00000581776 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
MSI2-214ENST00000581776 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
MSI2-214ENST00000581776 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
MSI2-214ENST00000581776 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
MSI2-214ENST00000581776 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.45
MSI2-214ENST00000581776 CUX2O14529 1486 aa12.2□□□□□ -0.46
MSI2-214ENST00000581776 SCRIBQ14160 1630 aa12.15□□□□□ -0.46
MSI2-214ENST00000581776 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
MSI2-214ENST00000581776 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
MSI2-214ENST00000581776 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
MSI2-214ENST00000581776 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
MSI2-214ENST00000581776 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
MSI2-214ENST00000581776 MMRN1Q13201 1228 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms