RNA–Protein interactions for RNA: ENST00000421322.1

XIST-203, X inactive specific transcript, humanhuman

TSL 2

Gene XIST, Length 446 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-203ENST00000421322 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
XIST-203ENST00000421322 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
XIST-203ENST00000421322 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
XIST-203ENST00000421322 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
XIST-203ENST00000421322 FOXD1Q16676 465 aa19.35■□□□□ 0.69
XIST-203ENST00000421322 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
XIST-203ENST00000421322 MSH5O43196 834 aa18.47■□□□□ 0.55
XIST-203ENST00000421322 PIAS4Q8N2W9 510 aaPredicted RBP18.01■□□□□ 0.47
XIST-203ENST00000421322 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
XIST-203ENST00000421322 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
XIST-203ENST00000421322 ADRA2BP18089 450 aa17.55■□□□□ 0.4
XIST-203ENST00000421322 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
XIST-203ENST00000421322 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
XIST-203ENST00000421322 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
XIST-203ENST00000421322 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
XIST-203ENST00000421322 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
XIST-203ENST00000421322 RNF39Q9H2S5 420 aa15.62■□□□□ 0.09
XIST-203ENST00000421322 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
XIST-203ENST00000421322 PPP4R3CPQ6ZMV5 832 aa15.45■□□□□ 0.06
XIST-203ENST00000421322 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
XIST-203ENST00000421322 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
XIST-203ENST00000421322 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
XIST-203ENST00000421322 DNAJC5BQ9UF47 199 aa15.25■□□□□ 0.03
XIST-203ENST00000421322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
XIST-203ENST00000421322 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
XIST-203ENST00000421322 POTEHQ6S545 545 aa14.67□□□□□ -0.06
XIST-203ENST00000421322 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
XIST-203ENST00000421322 CAPN15O75808 1086 aa14.43□□□□□ -0.1
XIST-203ENST00000421322 DSG3P32926 999 aa14.43□□□□□ -0.1
XIST-203ENST00000421322 U3KPZ7 1027 aaPredicted RBP14.42□□□□□ -0.1
XIST-203ENST00000421322 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
XIST-203ENST00000421322 APLP2Q06481 763 aa14.19□□□□□ -0.14
XIST-203ENST00000421322 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
XIST-203ENST00000421322 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
XIST-203ENST00000421322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
XIST-203ENST00000421322 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
XIST-203ENST00000421322 ABCB7O75027 752 aa13.97□□□□□ -0.17
XIST-203ENST00000421322 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
XIST-203ENST00000421322 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
XIST-203ENST00000421322 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
XIST-203ENST00000421322 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
XIST-203ENST00000421322 KCNA4P22459 653 aa13.66□□□□□ -0.22
XIST-203ENST00000421322 POLA2Q14181 598 aa13.53□□□□□ -0.24
XIST-203ENST00000421322 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
XIST-203ENST00000421322 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
XIST-203ENST00000421322 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
XIST-203ENST00000421322 ZBTB12Q9Y330 459 aaPredicted RBP13.37□□□□□ -0.27
XIST-203ENST00000421322 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
XIST-203ENST00000421322 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
XIST-203ENST00000421322 HAX1O00165 279 aa13.2□□□□□ -0.3
XIST-203ENST00000421322 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
XIST-203ENST00000421322 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
XIST-203ENST00000421322 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
XIST-203ENST00000421322 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
XIST-203ENST00000421322 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
XIST-203ENST00000421322 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
XIST-203ENST00000421322 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
XIST-203ENST00000421322 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
XIST-203ENST00000421322 EVX2Q03828 476 aa12.85□□□□□ -0.35
XIST-203ENST00000421322 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
XIST-203ENST00000421322 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
XIST-203ENST00000421322 FBLN2P98095 1184 aa12.77□□□□□ -0.37
XIST-203ENST00000421322 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
XIST-203ENST00000421322 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
XIST-203ENST00000421322 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
XIST-203ENST00000421322 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
XIST-203ENST00000421322 LHX8Q68G74 356 aa12.66□□□□□ -0.38
XIST-203ENST00000421322 GABBR2O75899 941 aa12.64□□□□□ -0.39
XIST-203ENST00000421322 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
XIST-203ENST00000421322 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
XIST-203ENST00000421322 ZBTB22O15209 634 aa12.49□□□□□ -0.41
XIST-203ENST00000421322 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
XIST-203ENST00000421322 CLCN6P51797 869 aa12.45□□□□□ -0.42
XIST-203ENST00000421322 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
XIST-203ENST00000421322 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
XIST-203ENST00000421322 CD44P16070 742 aaKnown RBP12.36□□□□□ -0.43
XIST-203ENST00000421322 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
XIST-203ENST00000421322 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
XIST-203ENST00000421322 PLSCR2Q9NRY7 297 aa12.29□□□□□ -0.44
XIST-203ENST00000421322 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
XIST-203ENST00000421322 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
XIST-203ENST00000421322 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
XIST-203ENST00000421322 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
XIST-203ENST00000421322 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
XIST-203ENST00000421322 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
XIST-203ENST00000421322 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
XIST-203ENST00000421322 GALR2O43603 387 aaPredicted RBP11.97□□□□□ -0.49
XIST-203ENST00000421322 POTEMA6NI47 508 aa11.95□□□□□ -0.5
XIST-203ENST00000421322 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
XIST-203ENST00000421322 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
XIST-203ENST00000421322 POTEGQ6S5H5 508 aa11.9□□□□□ -0.5
XIST-203ENST00000421322 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
XIST-203ENST00000421322 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
XIST-203ENST00000421322 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
XIST-203ENST00000421322 MAMSTRQ6ZN01 415 aa11.81□□□□□ -0.52
XIST-203ENST00000421322 SLC39A7Q92504 469 aa11.77□□□□□ -0.53
XIST-203ENST00000421322 C7P10643 843 aa11.76□□□□□ -0.53
XIST-203ENST00000421322 METRNQ9UJH8 293 aa11.75□□□□□ -0.53
XIST-203ENST00000421322 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
XIST-203ENST00000421322 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms