RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 NISCHQ9Y2I1 1504 aa39.14■■■■□ 3.86
MEG3-224ENST00000554639 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
MEG3-224ENST00000554639 ZCCHC6Q5VYS8 1495 aaKnown RBP33.01■■■□□ 2.88
MEG3-224ENST00000554639 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
MEG3-224ENST00000554639 SHROOM4Q9ULL8 1493 aa32.14■■■□□ 2.74
MEG3-224ENST00000554639 DCAF8L2P0C7V8 631 aa31.92■■■□□ 2.7
MEG3-224ENST00000554639 MYO15BQ96JP2 1530 aa31.89■■■□□ 2.7
MEG3-224ENST00000554639 NACADO15069 1562 aa31.43■■■□□ 2.62
MEG3-224ENST00000554639 ABCC9O60706 1549 aa31.3■■■□□ 2.6
MEG3-224ENST00000554639 SUPT5HO00267 1087 aaKnown RBP31.29■■■□□ 2.6
MEG3-224ENST00000554639 SCRIBQ14160 1630 aa31.1■■■□□ 2.57
MEG3-224ENST00000554639 RB1CC1Q8TDY2 1594 aa30.98■■■□□ 2.55
MEG3-224ENST00000554639 RSF1Q96T23 1441 aaPredicted RBP30.57■■■□□ 2.48
MEG3-224ENST00000554639 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
MEG3-224ENST00000554639 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
MEG3-224ENST00000554639 CECR2Q9BXF3 1484 aa30.25■■■□□ 2.43
MEG3-224ENST00000554639 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.43
MEG3-224ENST00000554639 MROH2BQ7Z745 1585 aa30.19■■■□□ 2.42
MEG3-224ENST00000554639 WIZO95785 1651 aa29.97■■■□□ 2.39
MEG3-224ENST00000554639 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
MEG3-224ENST00000554639 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
MEG3-224ENST00000554639 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
MEG3-224ENST00000554639 PEG3Q9GZU2 1588 aa29.63■■■□□ 2.33
MEG3-224ENST00000554639 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
MEG3-224ENST00000554639 EIF4G1Q04637 1599 aaKnown RBP29.5■■■□□ 2.31
MEG3-224ENST00000554639 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
MEG3-224ENST00000554639 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
MEG3-224ENST00000554639 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
MEG3-224ENST00000554639 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
MEG3-224ENST00000554639 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
MEG3-224ENST00000554639 LOC105371045A0A1W2PR82 267 aa29.12■■■□□ 2.25
MEG3-224ENST00000554639 HMGXB3Q12766 1538 aa29.01■■■□□ 2.24
MEG3-224ENST00000554639 NCAPD3P42695 1498 aa28.98■■■□□ 2.23
MEG3-224ENST00000554639 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
MEG3-224ENST00000554639 EEA1Q15075 1411 aa28.82■■■□□ 2.2
MEG3-224ENST00000554639 FAM9AQ8IZU1 332 aaPredicted RBP28.8■■■□□ 2.2
MEG3-224ENST00000554639 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
MEG3-224ENST00000554639 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
MEG3-224ENST00000554639 SOGA1O94964 1423 aa28.53■■■□□ 2.16
MEG3-224ENST00000554639 TOP2BQ02880 1626 aa28.5■■■□□ 2.15
MEG3-224ENST00000554639 PCGF6Q9BYE7 350 aa28.49■■■□□ 2.15
MEG3-224ENST00000554639 CFTRP13569 1480 aa28.49■■■□□ 2.15
MEG3-224ENST00000554639 TRIM26Q12899 539 aaPredicted RBP28.49■■■□□ 2.15
MEG3-224ENST00000554639 BIVM-ERCC5R4GMW8 1640 aa28.47■■■□□ 2.15
MEG3-224ENST00000554639 CSRNP3Q8WYN3 585 aa28.47■■■□□ 2.15
MEG3-224ENST00000554639 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
MEG3-224ENST00000554639 TNIKQ9UKE5 1360 aa28.41■■■□□ 2.14
MEG3-224ENST00000554639 CC2D2AQ9P2K1 1620 aa28.41■■■□□ 2.14
MEG3-224ENST00000554639 GOLGA3Q08378 1498 aa28.36■■■□□ 2.13
MEG3-224ENST00000554639 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
MEG3-224ENST00000554639 KIF21BO75037 1637 aa28.35■■■□□ 2.13
MEG3-224ENST00000554639 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
MEG3-224ENST00000554639 HRCP23327 699 aa28.3■■■□□ 2.12
MEG3-224ENST00000554639 EHMT2Q96KQ7 1210 aa28.26■■■□□ 2.11
MEG3-224ENST00000554639 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
MEG3-224ENST00000554639 CEP162Q5TB80 1403 aa28.23■■■□□ 2.11
MEG3-224ENST00000554639 CUX1P39880 1505 aa28.2■■■□□ 2.11
MEG3-224ENST00000554639 UBTFP17480 764 aaKnown RBP28.1■■■□□ 2.09
MEG3-224ENST00000554639 ERICH3Q5RHP9 1530 aa28.06■■■□□ 2.08
MEG3-224ENST00000554639 KIF27Q86VH2 1401 aa28.02■■■□□ 2.08
MEG3-224ENST00000554639 PRXQ9BXM0 1461 aa27.98■■■□□ 2.07
MEG3-224ENST00000554639 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.06
MEG3-224ENST00000554639 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
MEG3-224ENST00000554639 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
MEG3-224ENST00000554639 CLIP1P30622 1438 aa27.88■■■□□ 2.05
MEG3-224ENST00000554639 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
MEG3-224ENST00000554639 FGD5Q6ZNL6 1462 aa27.8■■■□□ 2.04
MEG3-224ENST00000554639 ZEB1P37275 1124 aaPredicted RBP27.79■■■□□ 2.04
MEG3-224ENST00000554639 VPS8Q8N3P4 1428 aa27.76■■■□□ 2.03
MEG3-224ENST00000554639 CUX2O14529 1486 aa27.74■■■□□ 2.03
MEG3-224ENST00000554639 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
MEG3-224ENST00000554639 NESP48681 1621 aa27.66■■■□□ 2.02
MEG3-224ENST00000554639 IGF1RP08069 1367 aa27.66■■■□□ 2.02
MEG3-224ENST00000554639 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
MEG3-224ENST00000554639 ABCA10Q8WWZ4 1543 aa27.64■■■□□ 2.01
MEG3-224ENST00000554639 PPARGC1BQ86YN6 1023 aaKnown RBP27.61■■■□□ 2.01
MEG3-224ENST00000554639 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
MEG3-224ENST00000554639 CARMIL1Q5VZK9 1371 aa27.55■■■□□ 2
MEG3-224ENST00000554639 ARAP1Q96P48 1450 aa27.51■■□□□ 1.99
MEG3-224ENST00000554639 APLP2Q06481 763 aa27.5■■□□□ 1.99
MEG3-224ENST00000554639 URB2Q14146 1524 aaKnown RBP27.5■■□□□ 1.99
MEG3-224ENST00000554639 CUL7Q14999 1698 aa27.48■■□□□ 1.99
MEG3-224ENST00000554639 WDR97A6NE52 1622 aa27.47■■□□□ 1.99
MEG3-224ENST00000554639 RAD54L2Q9Y4B4 1467 aa27.43■■□□□ 1.98
MEG3-224ENST00000554639 KIF21AQ7Z4S6 1674 aa27.4■■□□□ 1.98
MEG3-224ENST00000554639 ARHGAP35Q9NRY4 1499 aa27.4■■□□□ 1.98
MEG3-224ENST00000554639 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
MEG3-224ENST00000554639 DNAJC5BQ9UF47 199 aa27.29■■□□□ 1.96
MEG3-224ENST00000554639 RANGAP1P46060 587 aaPredicted RBP27.28■■□□□ 1.96
MEG3-224ENST00000554639 MAP3K1Q13233 1512 aa27.28■■□□□ 1.96
MEG3-224ENST00000554639 TTBK1Q5TCY1 1321 aaPredicted RBP27.24■■□□□ 1.95
MEG3-224ENST00000554639 EFCAB5A4FU69 1503 aa27.24■■□□□ 1.95
MEG3-224ENST00000554639 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
MEG3-224ENST00000554639 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
MEG3-224ENST00000554639 GAPVD1Q14C86 1478 aa27.23■■□□□ 1.95
MEG3-224ENST00000554639 CTTNBP2Q8WZ74 1663 aa27.23■■□□□ 1.95
MEG3-224ENST00000554639 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
MEG3-224ENST00000554639 CCER1Q8TC90 406 aaPredicted RBP27.19■■□□□ 1.94
MEG3-224ENST00000554639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.12■■□□□ 1.93
MEG3-224ENST00000554639 TDRD9Q8NDG6 1382 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms