RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
FGFR1-211ENST00000425967 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
FGFR1-211ENST00000425967 NISCHQ9Y2I1 1504 aa20.26■□□□□ 0.83
FGFR1-211ENST00000425967 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
FGFR1-211ENST00000425967 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.8
FGFR1-211ENST00000425967 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
FGFR1-211ENST00000425967 APLP2Q06481 763 aa19.93■□□□□ 0.78
FGFR1-211ENST00000425967 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
FGFR1-211ENST00000425967 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
FGFR1-211ENST00000425967 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
FGFR1-211ENST00000425967 RANGAP1P46060 587 aaPredicted RBP19.22■□□□□ 0.67
FGFR1-211ENST00000425967 ATP1B4Q9UN42 357 aaPredicted RBP19.18■□□□□ 0.66
FGFR1-211ENST00000425967 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
FGFR1-211ENST00000425967 ERICH6Q7L0X2 663 aa19.13■□□□□ 0.65
FGFR1-211ENST00000425967 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
FGFR1-211ENST00000425967 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
FGFR1-211ENST00000425967 ZEB1P37275 1124 aaPredicted RBP19.07■□□□□ 0.64
FGFR1-211ENST00000425967 UBTFP17480 764 aaKnown RBP18.99■□□□□ 0.63
FGFR1-211ENST00000425967 NEFLP07196 543 aa18.83■□□□□ 0.61
FGFR1-211ENST00000425967 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
FGFR1-211ENST00000425967 MYT1LQ9UL68 1186 aa18.59■□□□□ 0.57
FGFR1-211ENST00000425967 PPARGC1BQ86YN6 1023 aaKnown RBP18.54■□□□□ 0.56
FGFR1-211ENST00000425967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
FGFR1-211ENST00000425967 HNRNPUL2Q1KMD3 747 aaKnown RBP18.53■□□□□ 0.56
FGFR1-211ENST00000425967 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
FGFR1-211ENST00000425967 ITGAEP38570 1179 aa18.4■□□□□ 0.54
FGFR1-211ENST00000425967 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.54
FGFR1-211ENST00000425967 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.54
FGFR1-211ENST00000425967 MYT1Q01538 1121 aa18.31■□□□□ 0.52
FGFR1-211ENST00000425967 HRCP23327 699 aa18.28■□□□□ 0.52
FGFR1-211ENST00000425967 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
FGFR1-211ENST00000425967 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
FGFR1-211ENST00000425967 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
FGFR1-211ENST00000425967 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
FGFR1-211ENST00000425967 CLSPNQ9HAW4 1339 aa17.97■□□□□ 0.47
FGFR1-211ENST00000425967 FAM50AQ14320 339 aaKnown RBP17.93■□□□□ 0.46
FGFR1-211ENST00000425967 ZNF316A6NFI3 1004 aaPredicted RBP17.92■□□□□ 0.46
FGFR1-211ENST00000425967 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
FGFR1-211ENST00000425967 RTL5Q5HYW3 569 aaPredicted RBP17.84■□□□□ 0.45
FGFR1-211ENST00000425967 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
FGFR1-211ENST00000425967 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
FGFR1-211ENST00000425967 NEUROD1Q13562 356 aa17.75■□□□□ 0.43
FGFR1-211ENST00000425967 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.434e-6■□□□□ 9.3
FGFR1-211ENST00000425967 ZBTB47Q9UFB7 747 aaPredicted RBP17.72■□□□□ 0.43
FGFR1-211ENST00000425967 ZNF326Q5BKZ1 582 aaKnown RBP17.69■□□□□ 0.42
FGFR1-211ENST00000425967 FBLN2P98095 1184 aa17.68■□□□□ 0.42
FGFR1-211ENST00000425967 ANP32CO43423 234 aa17.63■□□□□ 0.41
FGFR1-211ENST00000425967 ABCC9O60706 1549 aa17.63■□□□□ 0.41
FGFR1-211ENST00000425967 NEFMP07197 916 aa17.58■□□□□ 0.41
FGFR1-211ENST00000425967 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
FGFR1-211ENST00000425967 BCANQ96GW7 911 aa17.57■□□□□ 0.4
FGFR1-211ENST00000425967 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
FGFR1-211ENST00000425967 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.39
FGFR1-211ENST00000425967 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
FGFR1-211ENST00000425967 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
FGFR1-211ENST00000425967 P3H3Q8IVL6 736 aa17.4■□□□□ 0.38
FGFR1-211ENST00000425967 ARID3CA6NKF2 412 aa17.4■□□□□ 0.38
FGFR1-211ENST00000425967 ESF1Q9H501 851 aaKnown RBP17.39■□□□□ 0.37
FGFR1-211ENST00000425967 ZNF777Q9ULD5 760 aaPredicted RBP17.39■□□□□ 0.37
FGFR1-211ENST00000425967 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
FGFR1-211ENST00000425967 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.36
FGFR1-211ENST00000425967 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
FGFR1-211ENST00000425967 ANP32AP39687 249 aaKnown RBP17.23■□□□□ 0.35
FGFR1-211ENST00000425967 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
FGFR1-211ENST00000425967 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
FGFR1-211ENST00000425967 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
FGFR1-211ENST00000425967 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
FGFR1-211ENST00000425967 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
FGFR1-211ENST00000425967 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
FGFR1-211ENST00000425967 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
FGFR1-211ENST00000425967 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.33
FGFR1-211ENST00000425967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.316e-7■■□□□ 13.1
FGFR1-211ENST00000425967 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.314e-7■■□□□ 13.9
FGFR1-211ENST00000425967 FKBP8Q14318 412 aa16.99■□□□□ 0.31
FGFR1-211ENST00000425967 FAM9BQ8IZU0 186 aa16.99■□□□□ 0.31
FGFR1-211ENST00000425967 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
FGFR1-211ENST00000425967 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
FGFR1-211ENST00000425967 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
FGFR1-211ENST00000425967 TMC1Q8TDI8 760 aa16.96■□□□□ 0.3
FGFR1-211ENST00000425967 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
FGFR1-211ENST00000425967 WDR43Q15061 677 aaKnown RBP eCLIP16.94■□□□□ 0.3
FGFR1-211ENST00000425967 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
FGFR1-211ENST00000425967 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
FGFR1-211ENST00000425967 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
FGFR1-211ENST00000425967 DCAF1Q9Y4B6 1507 aa16.89■□□□□ 0.29
FGFR1-211ENST00000425967 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
FGFR1-211ENST00000425967 KDM2AQ9Y2K7 1162 aa16.87■□□□□ 0.29
FGFR1-211ENST00000425967 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
FGFR1-211ENST00000425967 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
FGFR1-211ENST00000425967 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
FGFR1-211ENST00000425967 MYH16Q9H6N6 1097 aa16.83■□□□□ 0.28
FGFR1-211ENST00000425967 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
FGFR1-211ENST00000425967 A0A0G2JS52 829 aa16.8■□□□□ 0.28
FGFR1-211ENST00000425967 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
FGFR1-211ENST00000425967 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
FGFR1-211ENST00000425967 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.27
FGFR1-211ENST00000425967 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
FGFR1-211ENST00000425967 C14orf37Q86TY3 774 aa16.74■□□□□ 0.27
FGFR1-211ENST00000425967 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
FGFR1-211ENST00000425967 CDK11BP21127 795 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms