RNA–Protein interactions for RNA: ENST00000349048.8

PFKL-201, Transcript of phosphofructokinase, liver type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFKL, Length 2,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-201ENST00000349048 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
PFKL-201ENST00000349048 SHROOM4Q9ULL8 1493 aa31.96■■■□□ 2.71
PFKL-201ENST00000349048 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
PFKL-201ENST00000349048 SUPT5HO00267 1087 aaKnown RBP31.17■■■□□ 2.58
PFKL-201ENST00000349048 ZCCHC6Q5VYS8 1495 aaKnown RBP30.72■■■□□ 2.51
PFKL-201ENST00000349048 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
PFKL-201ENST00000349048 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
PFKL-201ENST00000349048 ABCC9O60706 1549 aa29.65■■■□□ 2.34
PFKL-201ENST00000349048 MYO15BQ96JP2 1530 aa29.64■■■□□ 2.34
PFKL-201ENST00000349048 SCRIBQ14160 1630 aa29.51■■■□□ 2.31
PFKL-201ENST00000349048 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
PFKL-201ENST00000349048 LOC105371045A0A1W2PR82 267 aa29.29■■■□□ 2.28
PFKL-201ENST00000349048 EHMT2Q96KQ7 1210 aa29.18■■■□□ 2.26
PFKL-201ENST00000349048 FAM9AQ8IZU1 332 aaPredicted RBP28.99■■■□□ 2.23
PFKL-201ENST00000349048 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
PFKL-201ENST00000349048 PCGF6Q9BYE7 350 aa28.91■■■□□ 2.22
PFKL-201ENST00000349048 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
PFKL-201ENST00000349048 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
PFKL-201ENST00000349048 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
PFKL-201ENST00000349048 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.175e-7■■□□□ 12.8
PFKL-201ENST00000349048 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
PFKL-201ENST00000349048 NACADO15069 1562 aa28.6■■■□□ 2.17
PFKL-201ENST00000349048 WIZO95785 1651 aa28.47■■■□□ 2.15
PFKL-201ENST00000349048 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
PFKL-201ENST00000349048 HRCP23327 699 aa28.28■■■□□ 2.12
PFKL-201ENST00000349048 TTBK1Q5TCY1 1321 aaPredicted RBP28.06■■■□□ 2.08
PFKL-201ENST00000349048 UNC13AQ9UPW8 1703 aa28.03■■■□□ 2.08
PFKL-201ENST00000349048 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.06
PFKL-201ENST00000349048 ABCC8Q09428 1581 aa27.93■■■□□ 2.06
PFKL-201ENST00000349048 TRIM26Q12899 539 aaPredicted RBP27.92■■■□□ 2.06
PFKL-201ENST00000349048 CCDC88BA6NC98 1476 aa27.85■■■□□ 2.05
PFKL-201ENST00000349048 SMARCA4P51532 1647 aa27.83■■■□□ 2.05
PFKL-201ENST00000349048 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
PFKL-201ENST00000349048 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
PFKL-201ENST00000349048 SMARCA2P51531 1590 aa27.64■■■□□ 2.01
PFKL-201ENST00000349048 RANGAP1P46060 587 aaPredicted RBP27.63■■■□□ 2.01
PFKL-201ENST00000349048 SOGA1O94964 1423 aa27.63■■■□□ 2.01
PFKL-201ENST00000349048 RUSC2Q8N2Y8 1516 aa27.58■■■□□ 2.01
PFKL-201ENST00000349048 EIF4G1Q04637 1599 aaKnown RBP27.54■■■□□ 2
PFKL-201ENST00000349048 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
PFKL-201ENST00000349048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.39■■□□□ 1.98
PFKL-201ENST00000349048 CSRNP3Q8WYN3 585 aa27.32■■□□□ 1.96
PFKL-201ENST00000349048 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
PFKL-201ENST00000349048 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
PFKL-201ENST00000349048 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.95
PFKL-201ENST00000349048 CEP162Q5TB80 1403 aa27.18■■□□□ 1.94
PFKL-201ENST00000349048 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
PFKL-201ENST00000349048 CCER1Q8TC90 406 aaPredicted RBP27.1■■□□□ 1.93
PFKL-201ENST00000349048 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
PFKL-201ENST00000349048 TNIKQ9UKE5 1360 aa26.94■■□□□ 1.9
PFKL-201ENST00000349048 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
PFKL-201ENST00000349048 ZEB1P37275 1124 aaPredicted RBP26.86■■□□□ 1.89
PFKL-201ENST00000349048 GOLGA3Q08378 1498 aa26.85■■□□□ 1.89
PFKL-201ENST00000349048 RAPGEF2Q9Y4G8 1499 aa26.85■■□□□ 1.89
PFKL-201ENST00000349048 CLIP1P30622 1438 aa26.74■■□□□ 1.87
PFKL-201ENST00000349048 EEA1Q15075 1411 aa26.74■■□□□ 1.87
PFKL-201ENST00000349048 CEP164Q9UPV0 1460 aa26.68■■□□□ 1.86
PFKL-201ENST00000349048 APLP2Q06481 763 aa26.64■■□□□ 1.85
PFKL-201ENST00000349048 NCAPD3P42695 1498 aa26.61■■□□□ 1.85
PFKL-201ENST00000349048 CUX1P39880 1505 aa26.57■■□□□ 1.84
PFKL-201ENST00000349048 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
PFKL-201ENST00000349048 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
PFKL-201ENST00000349048 KANK4Q5T7N3 995 aaPredicted RBP26.51■■□□□ 1.83
PFKL-201ENST00000349048 ITGAEP38570 1179 aa26.49■■□□□ 1.83
PFKL-201ENST00000349048 P3H3Q8IVL6 736 aa26.49■■□□□ 1.83
PFKL-201ENST00000349048 KIF21BO75037 1637 aa26.46■■□□□ 1.83
PFKL-201ENST00000349048 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
PFKL-201ENST00000349048 ATP1B4Q9UN42 357 aaPredicted RBP26.42■■□□□ 1.82
PFKL-201ENST00000349048 VPS8Q8N3P4 1428 aa26.42■■□□□ 1.82
PFKL-201ENST00000349048 CFTRP13569 1480 aa26.41■■□□□ 1.82
PFKL-201ENST00000349048 CC2D2AQ9P2K1 1620 aa26.35■■□□□ 1.81
PFKL-201ENST00000349048 NESP48681 1621 aa26.34■■□□□ 1.81
PFKL-201ENST00000349048 CUX2O14529 1486 aa26.34■■□□□ 1.81
PFKL-201ENST00000349048 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
PFKL-201ENST00000349048 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
PFKL-201ENST00000349048 DIEXFQ68CQ4 756 aaKnown RBP26.3■■□□□ 1.8
PFKL-201ENST00000349048 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
PFKL-201ENST00000349048 PRXQ9BXM0 1461 aa26.29■■□□□ 1.8
PFKL-201ENST00000349048 ARAP1Q96P48 1450 aa26.29■■□□□ 1.8
PFKL-201ENST00000349048 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.79
PFKL-201ENST00000349048 IGF1RP08069 1367 aa26.2■■□□□ 1.78
PFKL-201ENST00000349048 FGD5Q6ZNL6 1462 aa26.2■■□□□ 1.78
PFKL-201ENST00000349048 YTHDC1Q96MU7 727 aaKnown RBP26.16■■□□□ 1.78
PFKL-201ENST00000349048 SCAF1Q9H7N4 1312 aaKnown RBP26.14■■□□□ 1.78
PFKL-201ENST00000349048 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
PFKL-201ENST00000349048 CARMIL1Q5VZK9 1371 aa26.11■■□□□ 1.77
PFKL-201ENST00000349048 ARHGAP35Q9NRY4 1499 aa26.1■■□□□ 1.77
PFKL-201ENST00000349048 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
PFKL-201ENST00000349048 NEUROD1Q13562 356 aa26.03■■□□□ 1.76
PFKL-201ENST00000349048 ZNF316A6NFI3 1004 aaPredicted RBP26.03■■□□□ 1.76
PFKL-201ENST00000349048 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
PFKL-201ENST00000349048 FAM50AQ14320 339 aaKnown RBP25.98■■□□□ 1.75
PFKL-201ENST00000349048 ARID3CA6NKF2 412 aa25.96■■□□□ 1.75
PFKL-201ENST00000349048 MIER1Q8N108 512 aa25.91■■□□□ 1.74
PFKL-201ENST00000349048 FHOD3Q2V2M9 1422 aa25.9■■□□□ 1.74
PFKL-201ENST00000349048 POLA1P09884 1462 aaPredicted RBP25.89■■□□□ 1.73
PFKL-201ENST00000349048 TOPBP1Q92547 1522 aa25.85■■□□□ 1.73
PFKL-201ENST00000349048 DHX57Q6P158 1386 aaKnown RBP25.82■■□□□ 1.72
PFKL-201ENST00000349048 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
PFKL-201ENST00000349048 CCNB3Q8WWL7 1395 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms