RNA–Protein interactions for RNA: ENST00000432985.1

GREB1-207, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best)

Gene GREB1, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-207ENST00000432985 NISCHQ9Y2I1 1504 aa26.25■■□□□ 1.79
GREB1-207ENST00000432985 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
GREB1-207ENST00000432985 ABCC9O60706 1549 aa22.21■■□□□ 1.15
GREB1-207ENST00000432985 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
GREB1-207ENST00000432985 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
GREB1-207ENST00000432985 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
GREB1-207ENST00000432985 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
GREB1-207ENST00000432985 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
GREB1-207ENST00000432985 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
GREB1-207ENST00000432985 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
GREB1-207ENST00000432985 NACADO15069 1562 aa21.24■□□□□ 0.99
GREB1-207ENST00000432985 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
GREB1-207ENST00000432985 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
GREB1-207ENST00000432985 SCRIBQ14160 1630 aa20.81■□□□□ 0.92
GREB1-207ENST00000432985 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
GREB1-207ENST00000432985 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
GREB1-207ENST00000432985 HRCP23327 699 aa20.65■□□□□ 0.9
GREB1-207ENST00000432985 BICRAQ9NZM4 1560 aa20.62■□□□□ 0.89
GREB1-207ENST00000432985 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
GREB1-207ENST00000432985 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.87
GREB1-207ENST00000432985 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
GREB1-207ENST00000432985 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
GREB1-207ENST00000432985 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
GREB1-207ENST00000432985 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
GREB1-207ENST00000432985 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
GREB1-207ENST00000432985 WIZO95785 1651 aa20.24■□□□□ 0.83
GREB1-207ENST00000432985 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
GREB1-207ENST00000432985 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
GREB1-207ENST00000432985 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
GREB1-207ENST00000432985 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
GREB1-207ENST00000432985 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
GREB1-207ENST00000432985 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
GREB1-207ENST00000432985 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
GREB1-207ENST00000432985 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
GREB1-207ENST00000432985 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
GREB1-207ENST00000432985 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
GREB1-207ENST00000432985 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
GREB1-207ENST00000432985 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
GREB1-207ENST00000432985 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
GREB1-207ENST00000432985 EEA1Q15075 1411 aa19.63■□□□□ 0.73
GREB1-207ENST00000432985 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
GREB1-207ENST00000432985 NCAPD3P42695 1498 aa19.58■□□□□ 0.72
GREB1-207ENST00000432985 SOGA1O94964 1423 aa19.57■□□□□ 0.72
GREB1-207ENST00000432985 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
GREB1-207ENST00000432985 TNIKQ9UKE5 1360 aa19.55■□□□□ 0.72
GREB1-207ENST00000432985 CEP162Q5TB80 1403 aa19.52■□□□□ 0.71
GREB1-207ENST00000432985 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
GREB1-207ENST00000432985 HMGXB3Q12766 1538 aa19.48■□□□□ 0.71
GREB1-207ENST00000432985 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
GREB1-207ENST00000432985 GOLGA3Q08378 1498 aa19.42■□□□□ 0.7
GREB1-207ENST00000432985 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
GREB1-207ENST00000432985 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
GREB1-207ENST00000432985 KIF21BO75037 1637 aa19.34■□□□□ 0.69
GREB1-207ENST00000432985 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
GREB1-207ENST00000432985 CEP164Q9UPV0 1460 aa19.32■□□□□ 0.68
GREB1-207ENST00000432985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
GREB1-207ENST00000432985 CCER1Q8TC90 406 aaPredicted RBP19.31■□□□□ 0.68
GREB1-207ENST00000432985 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
GREB1-207ENST00000432985 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
GREB1-207ENST00000432985 CLIP1P30622 1438 aa19.15■□□□□ 0.66
GREB1-207ENST00000432985 NESP48681 1621 aa19.15■□□□□ 0.66
GREB1-207ENST00000432985 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
GREB1-207ENST00000432985 TTBK1Q5TCY1 1321 aaPredicted RBP19.14■□□□□ 0.65
GREB1-207ENST00000432985 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
GREB1-207ENST00000432985 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
GREB1-207ENST00000432985 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
GREB1-207ENST00000432985 CUX2O14529 1486 aa19.06■□□□□ 0.64
GREB1-207ENST00000432985 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
GREB1-207ENST00000432985 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
GREB1-207ENST00000432985 PRXQ9BXM0 1461 aa19■□□□□ 0.63
GREB1-207ENST00000432985 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
GREB1-207ENST00000432985 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
GREB1-207ENST00000432985 CUX1P39880 1505 aa18.96■□□□□ 0.63
GREB1-207ENST00000432985 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
GREB1-207ENST00000432985 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
GREB1-207ENST00000432985 CFTRP13569 1480 aa18.95■□□□□ 0.62
GREB1-207ENST00000432985 APLP2Q06481 763 aa18.94■□□□□ 0.62
GREB1-207ENST00000432985 THOC2Q8NI27 1593 aaKnown RBP18.92■□□□□ 0.62
GREB1-207ENST00000432985 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
GREB1-207ENST00000432985 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
GREB1-207ENST00000432985 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
GREB1-207ENST00000432985 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
GREB1-207ENST00000432985 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
GREB1-207ENST00000432985 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
GREB1-207ENST00000432985 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
GREB1-207ENST00000432985 RANGAP1P46060 587 aaPredicted RBP18.79■□□□□ 0.6
GREB1-207ENST00000432985 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
GREB1-207ENST00000432985 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
GREB1-207ENST00000432985 CENPBP07199 599 aaPredicted RBP18.74■□□□□ 0.59
GREB1-207ENST00000432985 WDR62O43379 1518 aa18.74■□□□□ 0.59
GREB1-207ENST00000432985 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
GREB1-207ENST00000432985 ARHGAP35Q9NRY4 1499 aa18.7■□□□□ 0.58
GREB1-207ENST00000432985 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
GREB1-207ENST00000432985 RRBP1Q9P2E9 1410 aaKnown RBP18.7■□□□□ 0.58
GREB1-207ENST00000432985 KANK4Q5T7N3 995 aaPredicted RBP18.69■□□□□ 0.58
GREB1-207ENST00000432985 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
GREB1-207ENST00000432985 IGF1RP08069 1367 aa18.68■□□□□ 0.58
GREB1-207ENST00000432985 DHX57Q6P158 1386 aaKnown RBP18.64■□□□□ 0.57
GREB1-207ENST00000432985 MAP3K1Q13233 1512 aa18.61■□□□□ 0.57
GREB1-207ENST00000432985 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms