RNA–Protein interactions for RNA: ENST00000635841.1

XIST-211, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 1,734 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-211ENST00000635841 NISCHQ9Y2I1 1504 aa20.44■□□□□ 0.86
XIST-211ENST00000635841 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
XIST-211ENST00000635841 ABCC9O60706 1549 aa17.13■□□□□ 0.33
XIST-211ENST00000635841 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
XIST-211ENST00000635841 DCAF8L2P0C7V8 631 aa16.97■□□□□ 0.31
XIST-211ENST00000635841 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
XIST-211ENST00000635841 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
XIST-211ENST00000635841 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
XIST-211ENST00000635841 NACADO15069 1562 aa16.76■□□□□ 0.27
XIST-211ENST00000635841 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
XIST-211ENST00000635841 SHROOM4Q9ULL8 1493 aa16.53■□□□□ 0.24
XIST-211ENST00000635841 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
XIST-211ENST00000635841 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
XIST-211ENST00000635841 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
XIST-211ENST00000635841 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
XIST-211ENST00000635841 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
XIST-211ENST00000635841 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
XIST-211ENST00000635841 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
XIST-211ENST00000635841 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
XIST-211ENST00000635841 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
XIST-211ENST00000635841 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
XIST-211ENST00000635841 SMARCA4P51532 1647 aa15.77■□□□□ 0.11
XIST-211ENST00000635841 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
XIST-211ENST00000635841 WIZO95785 1651 aa15.65■□□□□ 0.1
XIST-211ENST00000635841 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
XIST-211ENST00000635841 SMARCA2P51531 1590 aa15.56■□□□□ 0.08
XIST-211ENST00000635841 ATAD2BQ9ULI0 1458 aa15.55■□□□□ 0.08
XIST-211ENST00000635841 CC2D2AQ9P2K1 1620 aa15.51■□□□□ 0.07
XIST-211ENST00000635841 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
XIST-211ENST00000635841 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
XIST-211ENST00000635841 NCAPD3P42695 1498 aa15.46■□□□□ 0.06
XIST-211ENST00000635841 HMGXB3Q12766 1538 aa15.42■□□□□ 0.06
XIST-211ENST00000635841 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
XIST-211ENST00000635841 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
XIST-211ENST00000635841 CFTRP13569 1480 aa15.05■□□□□ 0
XIST-211ENST00000635841 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
XIST-211ENST00000635841 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
XIST-211ENST00000635841 NESP48681 1621 aa14.97□□□□□ -0.01
XIST-211ENST00000635841 LAMC3Q9Y6N6 1575 aa14.97□□□□□ -0.01
XIST-211ENST00000635841 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
XIST-211ENST00000635841 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
XIST-211ENST00000635841 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
XIST-211ENST00000635841 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
XIST-211ENST00000635841 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
XIST-211ENST00000635841 CEP164Q9UPV0 1460 aa14.81□□□□□ -0.04
XIST-211ENST00000635841 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
XIST-211ENST00000635841 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
XIST-211ENST00000635841 CUX1P39880 1505 aa14.78□□□□□ -0.04
XIST-211ENST00000635841 TOP2BQ02880 1626 aa14.77□□□□□ -0.04
XIST-211ENST00000635841 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
XIST-211ENST00000635841 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
XIST-211ENST00000635841 DNMBPQ6XZF7 1577 aa14.72□□□□□ -0.05
XIST-211ENST00000635841 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
XIST-211ENST00000635841 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
XIST-211ENST00000635841 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
XIST-211ENST00000635841 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
XIST-211ENST00000635841 WDR62O43379 1518 aa14.61□□□□□ -0.07
XIST-211ENST00000635841 THOC2Q8NI27 1593 aaKnown RBP14.61□□□□□ -0.07
XIST-211ENST00000635841 POLA1P09884 1462 aaPredicted RBP14.61□□□□□ -0.07
XIST-211ENST00000635841 FAM9AQ8IZU1 332 aaPredicted RBP14.61□□□□□ -0.07
XIST-211ENST00000635841 SOGA1O94964 1423 aa14.6□□□□□ -0.07
XIST-211ENST00000635841 EEA1Q15075 1411 aa14.56□□□□□ -0.08
XIST-211ENST00000635841 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
XIST-211ENST00000635841 SENP3Q9H4L4 574 aaPredicted RBP14.55□□□□□ -0.08
XIST-211ENST00000635841 RUSC2Q8N2Y8 1516 aa14.55□□□□□ -0.08
XIST-211ENST00000635841 CUX2O14529 1486 aa14.52□□□□□ -0.08
XIST-211ENST00000635841 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
XIST-211ENST00000635841 ABCA10Q8WWZ4 1543 aa14.52□□□□□ -0.09
XIST-211ENST00000635841 TARBP1Q13395 1621 aaKnown RBP14.49□□□□□ -0.09
XIST-211ENST00000635841 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
XIST-211ENST00000635841 WDR97A6NE52 1622 aa14.49□□□□□ -0.09
XIST-211ENST00000635841 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
XIST-211ENST00000635841 TDRD9Q8NDG6 1382 aaKnown RBP14.44□□□□□ -0.1
XIST-211ENST00000635841 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
XIST-211ENST00000635841 ABCA5Q8WWZ7 1642 aa14.41□□□□□ -0.1
XIST-211ENST00000635841 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
XIST-211ENST00000635841 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
XIST-211ENST00000635841 IGF1RP08069 1367 aa14.4□□□□□ -0.1
XIST-211ENST00000635841 ZNF608Q9ULD9 1512 aaPredicted RBP14.39□□□□□ -0.11
XIST-211ENST00000635841 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.111e-10■■■■■ 64.1
XIST-211ENST00000635841 KIF21BO75037 1637 aa14.37□□□□□ -0.11
XIST-211ENST00000635841 PRXQ9BXM0 1461 aa14.35□□□□□ -0.11
XIST-211ENST00000635841 ERICH3Q5RHP9 1530 aa14.35□□□□□ -0.11
XIST-211ENST00000635841 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
XIST-211ENST00000635841 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
XIST-211ENST00000635841 GOLGA3Q08378 1498 aa14.34□□□□□ -0.11
XIST-211ENST00000635841 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
XIST-211ENST00000635841 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
XIST-211ENST00000635841 CUL7Q14999 1698 aa14.32□□□□□ -0.12
XIST-211ENST00000635841 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
XIST-211ENST00000635841 UBTFP17480 764 aaKnown RBP14.3□□□□□ -0.12
XIST-211ENST00000635841 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
XIST-211ENST00000635841 TNIKQ9UKE5 1360 aa14.25□□□□□ -0.13
XIST-211ENST00000635841 SNAPC4Q5SXM2 1469 aa14.25□□□□□ -0.13
XIST-211ENST00000635841 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
XIST-211ENST00000635841 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
XIST-211ENST00000635841 MAGI1Q96QZ7 1491 aaPredicted RBP14.23□□□□□ -0.13
XIST-211ENST00000635841 SYNJ2O15056 1496 aa14.17□□□□□ -0.14
XIST-211ENST00000635841 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
XIST-211ENST00000635841 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms