RNA–Protein interactions for RNA: ENST00000555928.5

MEG3-225, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 720 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-225ENST00000555928 NISCHQ9Y2I1 1504 aa43.78■■■■■ 4.6
MEG3-225ENST00000555928 ABCC9O60706 1549 aa39.96■■■■□ 3.99
MEG3-225ENST00000555928 CCDC180Q9P1Z9 1646 aa39.53■■■■□ 3.92
MEG3-225ENST00000555928 DNAJC5BQ9UF47 199 aa37.86■■■■□ 3.65
MEG3-225ENST00000555928 RB1CC1Q8TDY2 1594 aa37.8■■■■□ 3.64
MEG3-225ENST00000555928 NACADO15069 1562 aa37.4■■■■□ 3.58
MEG3-225ENST00000555928 UNC13AQ9UPW8 1703 aa37.13■■■■□ 3.53
MEG3-225ENST00000555928 DCAF8L2P0C7V8 631 aa37.12■■■■□ 3.53
MEG3-225ENST00000555928 PABPN1Q86U42 306 aaKnown RBP eCLIP37.1■■■■□ 3.53
MEG3-225ENST00000555928 BICRAQ9NZM4 1560 aa36.79■■■■□ 3.48
MEG3-225ENST00000555928 MYO15BQ96JP2 1530 aa36.69■■■■□ 3.46
MEG3-225ENST00000555928 ZCCHC6Q5VYS8 1495 aaKnown RBP36.2■■■■□ 3.39
MEG3-225ENST00000555928 CC2D2AQ9P2K1 1620 aa36.1■■■■□ 3.37
MEG3-225ENST00000555928 SHROOM4Q9ULL8 1493 aa36.1■■■■□ 3.37
MEG3-225ENST00000555928 DCAF1Q9Y4B6 1507 aa36.08■■■■□ 3.37
MEG3-225ENST00000555928 SCRIBQ14160 1630 aa36.05■■■■□ 3.36
MEG3-225ENST00000555928 CECR2Q9BXF3 1484 aa36■■■■□ 3.35
MEG3-225ENST00000555928 EIF4G1Q04637 1599 aaKnown RBP35.89■■■■□ 3.34
MEG3-225ENST00000555928 DNAJC5Q9H3Z4 198 aa35■■■■□ 3.19
MEG3-225ENST00000555928 CUX2O14529 1486 aa34.54■■■■□ 3.12
MEG3-225ENST00000555928 NCAPD3P42695 1498 aa34.51■■■■□ 3.11
MEG3-225ENST00000555928 ERCC6Q03468 1493 aa34.49■■■■□ 3.11
MEG3-225ENST00000555928 ATAD2BQ9ULI0 1458 aa34.39■■■■□ 3.1
MEG3-225ENST00000555928 SMARCA4P51532 1647 aa34.3■■■■□ 3.08
MEG3-225ENST00000555928 HMGXB3Q12766 1538 aa34.27■■■■□ 3.08
MEG3-225ENST00000555928 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
MEG3-225ENST00000555928 NESP48681 1621 aa34.23■■■■□ 3.07
MEG3-225ENST00000555928 BAZ1BQ9UIG0 1483 aaKnown RBP34.04■■■■□ 3.04
MEG3-225ENST00000555928 BAZ1AQ9NRL2 1556 aaPredicted RBP34.01■■■■□ 3.03
MEG3-225ENST00000555928 THOC2Q8NI27 1593 aaKnown RBP33.99■■■■□ 3.03
MEG3-225ENST00000555928 PEG3Q9GZU2 1588 aa33.92■■■■□ 3.02
MEG3-225ENST00000555928 LAMC3Q9Y6N6 1575 aa33.85■■■■□ 3.01
MEG3-225ENST00000555928 KIF21AQ7Z4S6 1674 aa33.85■■■■□ 3.01
MEG3-225ENST00000555928 MROH2BQ7Z745 1585 aa33.77■■■■□ 3
MEG3-225ENST00000555928 PDS5BQ9NTI5 1447 aa33.6■■■□□ 2.97
MEG3-225ENST00000555928 CADPSQ9ULU8 1353 aa33.43■■■□□ 2.94
MEG3-225ENST00000555928 MRC2Q9UBG0 1479 aa33.41■■■□□ 2.94
MEG3-225ENST00000555928 WIZO95785 1651 aa33.4■■■□□ 2.94
MEG3-225ENST00000555928 WDR62O43379 1518 aa33.37■■■□□ 2.93
MEG3-225ENST00000555928 TRIM41Q8WV44 630 aa33.36■■■□□ 2.93
MEG3-225ENST00000555928 CEP164Q9UPV0 1460 aa33.18■■■□□ 2.9
MEG3-225ENST00000555928 FANCD2Q9BXW9 1451 aa33.11■■■□□ 2.89
MEG3-225ENST00000555928 CFTRP13569 1480 aa32.99■■■□□ 2.87
MEG3-225ENST00000555928 URB2Q14146 1524 aaKnown RBP32.91■■■□□ 2.86
MEG3-225ENST00000555928 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
MEG3-225ENST00000555928 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
MEG3-225ENST00000555928 OSCARQ8IYS5 282 aa32.84■■■□□ 2.85
MEG3-225ENST00000555928 PRDM2Q13029 1718 aa32.77■■■□□ 2.84
MEG3-225ENST00000555928 RIMBP3CA6NJZ7 1639 aa32.63■■■□□ 2.81
MEG3-225ENST00000555928 RIMBP3BA6NNM3 1639 aa32.63■■■□□ 2.81
MEG3-225ENST00000555928 RIMBP3Q9UFD9 1639 aa32.63■■■□□ 2.81
MEG3-225ENST00000555928 ZNF608Q9ULD9 1512 aaPredicted RBP32.58■■■□□ 2.81
MEG3-225ENST00000555928 IFT140Q96RY7 1462 aa32.51■■■□□ 2.79
MEG3-225ENST00000555928 CCDC88BA6NC98 1476 aa32.49■■■□□ 2.79
MEG3-225ENST00000555928 TOPBP1Q92547 1522 aa32.45■■■□□ 2.78
MEG3-225ENST00000555928 ARHGEF11O15085 1522 aa32.43■■■□□ 2.78
MEG3-225ENST00000555928 EIF4G3O43432 1585 aaKnown RBP32.42■■■□□ 2.78
MEG3-225ENST00000555928 CHD1O14646 1710 aa32.31■■■□□ 2.76
MEG3-225ENST00000555928 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
MEG3-225ENST00000555928 ABCC8Q09428 1581 aa32.25■■■□□ 2.75
MEG3-225ENST00000555928 TARBP1Q13395 1621 aaKnown RBP32.25■■■□□ 2.75
MEG3-225ENST00000555928 AQRO60306 1485 aaKnown RBP eCLIP32.21■■■□□ 2.75
MEG3-225ENST00000555928 CYB5RLQ6IPT4 315 aa32.16■■■□□ 2.74
MEG3-225ENST00000555928 POLA1P09884 1462 aaPredicted RBP32.1■■■□□ 2.73
MEG3-225ENST00000555928 ARAP1Q96P48 1450 aa32.09■■■□□ 2.73
MEG3-225ENST00000555928 FBLN2P98095 1184 aa32.04■■■□□ 2.72
MEG3-225ENST00000555928 RAD54L2Q9Y4B4 1467 aa32.01■■■□□ 2.71
MEG3-225ENST00000555928 TRHP20396 242 aaPredicted RBP31.95■■■□□ 2.71
MEG3-225ENST00000555928 TDRD9Q8NDG6 1382 aaKnown RBP31.92■■■□□ 2.7
MEG3-225ENST00000555928 SOGA1O94964 1423 aa31.88■■■□□ 2.69
MEG3-225ENST00000555928 SNAPC4Q5SXM2 1469 aa31.87■■■□□ 2.69
MEG3-225ENST00000555928 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
MEG3-225ENST00000555928 CLASP1Q7Z460 1538 aa31.84■■■□□ 2.69
MEG3-225ENST00000555928 WDR97A6NE52 1622 aa31.79■■■□□ 2.68
MEG3-225ENST00000555928 CUX1P39880 1505 aa31.76■■■□□ 2.68
MEG3-225ENST00000555928 SYNJ1O43426 1573 aa31.75■■■□□ 2.67
MEG3-225ENST00000555928 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
MEG3-225ENST00000555928 CHMP7Q8WUX9 453 aaPredicted RBP31.69■■■□□ 2.66
MEG3-225ENST00000555928 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
MEG3-225ENST00000555928 GRIN2BQ13224 1484 aa31.66■■■□□ 2.66
MEG3-225ENST00000555928 SYNJ2O15056 1496 aa31.63■■■□□ 2.65
MEG3-225ENST00000555928 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
MEG3-225ENST00000555928 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
MEG3-225ENST00000555928 ABCA10Q8WWZ4 1543 aa31.41■■■□□ 2.62
MEG3-225ENST00000555928 ERCC6L2Q5T890 1561 aa31.38■■■□□ 2.61
MEG3-225ENST00000555928 GRIN2AQ12879 1464 aa31.3■■■□□ 2.6
MEG3-225ENST00000555928 AEBP2Q6ZN18 517 aaPredicted RBP31.3■■■□□ 2.6
MEG3-225ENST00000555928 ADAMTS12P58397 1594 aa31.28■■■□□ 2.6
MEG3-225ENST00000555928 CEP170Q5SW79 1584 aa31.26■■■□□ 2.6
MEG3-225ENST00000555928 NUP160Q12769 1436 aa31.18■■■□□ 2.58
MEG3-225ENST00000555928 SHROOM2Q13796 1616 aa31.16■■■□□ 2.58
MEG3-225ENST00000555928 WRNQ14191 1432 aaPredicted RBP eCLIP31.16■■■□□ 2.58
MEG3-225ENST00000555928 BIVM-ERCC5R4GMW8 1640 aa31.16■■■□□ 2.58
MEG3-225ENST00000555928 TOP2BQ02880 1626 aa31.12■■■□□ 2.57
MEG3-225ENST00000555928 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
MEG3-225ENST00000555928 KIF13AQ9H1H9 1805 aa31.08■■■□□ 2.57
MEG3-225ENST00000555928 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.56
MEG3-225ENST00000555928 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
MEG3-225ENST00000555928 PRG4Q92954 1404 aaPredicted RBP30.93■■■□□ 2.54
MEG3-225ENST00000555928 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms