RNA–Protein interactions for RNA: ENST00000356207.9

FGFR1-204, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 3,824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-204ENST00000356207 NISCHQ9Y2I1 1504 aa28.44■■■□□ 2.14
FGFR1-204ENST00000356207 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
FGFR1-204ENST00000356207 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
FGFR1-204ENST00000356207 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
FGFR1-204ENST00000356207 EHMT2Q96KQ7 1210 aa24.31■■□□□ 1.48
FGFR1-204ENST00000356207 PCGF6Q9BYE7 350 aa24.17■■□□□ 1.46
FGFR1-204ENST00000356207 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
FGFR1-204ENST00000356207 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
FGFR1-204ENST00000356207 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
FGFR1-204ENST00000356207 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
FGFR1-204ENST00000356207 PPARGC1BQ86YN6 1023 aaKnown RBP23.79■■□□□ 1.4
FGFR1-204ENST00000356207 HRCP23327 699 aa23.65■■□□□ 1.38
FGFR1-204ENST00000356207 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
FGFR1-204ENST00000356207 ABCC9O60706 1549 aa23.5■■□□□ 1.35
FGFR1-204ENST00000356207 CCDC180Q9P1Z9 1646 aa23.47■■□□□ 1.35
FGFR1-204ENST00000356207 TTBK1Q5TCY1 1321 aaPredicted RBP23.4■■□□□ 1.34
FGFR1-204ENST00000356207 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
FGFR1-204ENST00000356207 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
FGFR1-204ENST00000356207 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.284e-6■□□□□ 9.3
FGFR1-204ENST00000356207 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
FGFR1-204ENST00000356207 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
FGFR1-204ENST00000356207 UBTFP17480 764 aaKnown RBP22.82■■□□□ 1.24
FGFR1-204ENST00000356207 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
FGFR1-204ENST00000356207 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
FGFR1-204ENST00000356207 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
FGFR1-204ENST00000356207 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
FGFR1-204ENST00000356207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
FGFR1-204ENST00000356207 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
FGFR1-204ENST00000356207 APLP2Q06481 763 aa22.48■■□□□ 1.19
FGFR1-204ENST00000356207 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
FGFR1-204ENST00000356207 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
FGFR1-204ENST00000356207 MROH2BQ7Z745 1585 aa22.3■■□□□ 1.16
FGFR1-204ENST00000356207 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
FGFR1-204ENST00000356207 NACADO15069 1562 aa22.24■■□□□ 1.15
FGFR1-204ENST00000356207 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
FGFR1-204ENST00000356207 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
FGFR1-204ENST00000356207 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
FGFR1-204ENST00000356207 WIZO95785 1651 aa22.07■■□□□ 1.12
FGFR1-204ENST00000356207 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
FGFR1-204ENST00000356207 ITGAEP38570 1179 aa22.07■■□□□ 1.12
FGFR1-204ENST00000356207 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
FGFR1-204ENST00000356207 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
FGFR1-204ENST00000356207 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
FGFR1-204ENST00000356207 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
FGFR1-204ENST00000356207 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
FGFR1-204ENST00000356207 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
FGFR1-204ENST00000356207 SOGA1O94964 1423 aa21.9■■□□□ 1.1
FGFR1-204ENST00000356207 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
FGFR1-204ENST00000356207 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
FGFR1-204ENST00000356207 CEP162Q5TB80 1403 aa21.75■■□□□ 1.07
FGFR1-204ENST00000356207 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
FGFR1-204ENST00000356207 WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
FGFR1-204ENST00000356207 RUSC2Q8N2Y8 1516 aa21.67■■□□□ 1.06
FGFR1-204ENST00000356207 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
FGFR1-204ENST00000356207 ZNF316A6NFI3 1004 aaPredicted RBP21.57■■□□□ 1.04
FGFR1-204ENST00000356207 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
FGFR1-204ENST00000356207 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
FGFR1-204ENST00000356207 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
FGFR1-204ENST00000356207 CLIP1P30622 1438 aa21.54■■□□□ 1.04
FGFR1-204ENST00000356207 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.04
FGFR1-204ENST00000356207 MIER1Q8N108 512 aa21.48■■□□□ 1.03
FGFR1-204ENST00000356207 GOLGA3Q08378 1498 aa21.47■■□□□ 1.03
FGFR1-204ENST00000356207 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
FGFR1-204ENST00000356207 ARID3CA6NKF2 412 aa21.39■■□□□ 1.01
FGFR1-204ENST00000356207 EEA1Q15075 1411 aa21.38■■□□□ 1.01
FGFR1-204ENST00000356207 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
FGFR1-204ENST00000356207 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
FGFR1-204ENST00000356207 BCANQ96GW7 911 aa21.27■■□□□ 1
FGFR1-204ENST00000356207 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
FGFR1-204ENST00000356207 RAPGEF2Q9Y4G8 1499 aa21.23■□□□□ 0.99
FGFR1-204ENST00000356207 CNGB1Q14028 1251 aaPredicted RBP21.15■□□□□ 0.98
FGFR1-204ENST00000356207 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
FGFR1-204ENST00000356207 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
FGFR1-204ENST00000356207 BICRAQ9NZM4 1560 aa21.09■□□□□ 0.97
FGFR1-204ENST00000356207 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
FGFR1-204ENST00000356207 FBLN2P98095 1184 aa21.05■□□□□ 0.96
FGFR1-204ENST00000356207 SYNJ1O43426 1573 aa21.04■□□□□ 0.96
FGFR1-204ENST00000356207 CUX2O14529 1486 aa21.04■□□□□ 0.96
FGFR1-204ENST00000356207 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
FGFR1-204ENST00000356207 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.96
FGFR1-204ENST00000356207 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
FGFR1-204ENST00000356207 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
FGFR1-204ENST00000356207 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.94
FGFR1-204ENST00000356207 SIN3AQ96ST3 1273 aa20.95■□□□□ 0.94
FGFR1-204ENST00000356207 DDX10Q13206 875 aaKnown RBP20.94■□□□□ 0.94
FGFR1-204ENST00000356207 MYT1Q01538 1121 aa20.91■□□□□ 0.94
FGFR1-204ENST00000356207 NEFLP07196 543 aa20.86■□□□□ 0.93
FGFR1-204ENST00000356207 CCNB3Q8WWL7 1395 aa20.83■□□□□ 0.93
FGFR1-204ENST00000356207 CADPSQ9ULU8 1353 aa20.83■□□□□ 0.93
FGFR1-204ENST00000356207 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
FGFR1-204ENST00000356207 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
FGFR1-204ENST00000356207 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
FGFR1-204ENST00000356207 RRP7BPQ9NSQ0 103 aa20.81■□□□□ 0.92
FGFR1-204ENST00000356207 FKBP8Q14318 412 aa20.79■□□□□ 0.92
FGFR1-204ENST00000356207 MTUS2Q5JR59 1369 aa20.79■□□□□ 0.92
FGFR1-204ENST00000356207 ZNF777Q9ULD5 760 aaPredicted RBP20.79■□□□□ 0.92
FGFR1-204ENST00000356207 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
FGFR1-204ENST00000356207 KIF21BO75037 1637 aa20.77■□□□□ 0.91
FGFR1-204ENST00000356207 NCAPD3P42695 1498 aa20.76■□□□□ 0.91
FGFR1-204ENST00000356207 SUPT16HQ9Y5B9 1047 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms